Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14o12
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein. 219 7e-57
D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein. 219 7e-57
BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondria... 219 1e-56
BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondria... 219 1e-56
BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein. 219 1e-56
AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondri... 219 1e-56
BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein. 215 1e-55
AL592301-15|CAI13946.1| 271|Homo sapiens peptidase (mitochondri... 176 6e-44
BC004342-1|AAH04342.1| 143|Homo sapiens PMPCA protein protein. 140 7e-33
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 86 1e-16
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 86 1e-16
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 86 1e-16
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 81 4e-15
AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein pr... 81 4e-15
AK129769-1|BAC85231.1| 149|Homo sapiens D1). protein. 75 3e-13
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 69 1e-11
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 66 2e-10
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 66 2e-10
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 66 2e-10
BC114360-1|AAI14361.1| 57|Homo sapiens PMPCA protein protein. 45 3e-04
BC007439-1|AAH07439.1| 582|Homo sapiens DCP1 decapping enzyme h... 31 3.4
AY146651-1|AAN62763.1| 582|Homo sapiens decapping enzyme hDcp1a... 31 3.4
AK001969-1|BAA92008.1| 582|Homo sapiens protein ( Homo sapiens ... 31 3.4
AJ275986-1|CAB77023.1| 582|Homo sapiens transcription factor pr... 31 3.4
AB075507-1|BAE45754.1| 582|Homo sapiens putative protein produc... 31 3.4
>D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 219 bits (536), Expect = 7e-57
Identities = 112/240 (46%), Positives = 153/240 (63%), Gaps = 3/240 (1%)
Frame = -1
Query: 758 ISQYXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXX 588
++QY GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 293 VAQYTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGG 351
Query: 587 XXXXXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVI 408
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I
Sbjct: 352 SFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEII 411
Query: 407 ARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINE 228
+E M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P
Sbjct: 412 TKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTL 471
Query: 227 IDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
I + +D+ RVA +ML G+PAVA G L LPT+++IQ+ +S P R LFR
Sbjct: 472 IRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEDIQTALSSKDGRLP---RTYRLFR 528
>D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 219 bits (536), Expect = 7e-57
Identities = 112/240 (46%), Positives = 153/240 (63%), Gaps = 3/240 (1%)
Frame = -1
Query: 758 ISQYXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXX 588
++QY GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 293 VAQYTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGG 351
Query: 587 XXXXXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVI 408
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I
Sbjct: 352 SFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEII 411
Query: 407 ARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINE 228
+E M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P
Sbjct: 412 TKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTL 471
Query: 227 IDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
I + +D+ RVA +ML G+PAVA G L LPT+++IQ+ +S P R LFR
Sbjct: 472 IRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEDIQTALSSKDGRLP---RTYRLFR 528
>BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 219 bits (534), Expect = 1e-56
Identities = 112/240 (46%), Positives = 152/240 (63%), Gaps = 3/240 (1%)
Frame = -1
Query: 758 ISQYXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXX 588
++QY GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 290 VAQYTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGG 348
Query: 587 XXXXXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVI 408
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I
Sbjct: 349 SFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEII 408
Query: 407 ARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINE 228
+E M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P
Sbjct: 409 TKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTL 468
Query: 227 IDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
I + +D+ RVA +ML G+PAVA G L LPT++ IQ+ +S P R LFR
Sbjct: 469 IRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLP---RTYRLFR 525
>BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 219 bits (534), Expect = 1e-56
Identities = 112/240 (46%), Positives = 152/240 (63%), Gaps = 3/240 (1%)
Frame = -1
Query: 758 ISQYXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXX 588
++QY GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 290 VAQYTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGG 348
Query: 587 XXXXXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVI 408
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I
Sbjct: 349 SFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEII 408
Query: 407 ARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINE 228
+E M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P
Sbjct: 409 TKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTL 468
Query: 227 IDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
I + +D+ RVA +ML G+PAVA G L LPT++ IQ+ +S P R LFR
Sbjct: 469 IRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLP---RTYRLFR 525
>BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein.
Length = 526
Score = 219 bits (534), Expect = 1e-56
Identities = 112/240 (46%), Positives = 152/240 (63%), Gaps = 3/240 (1%)
Frame = -1
Query: 758 ISQYXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXX 588
++QY GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 291 VAQYTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGG 349
Query: 587 XXXXXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVI 408
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I
Sbjct: 350 SFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEII 409
Query: 407 ARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINE 228
+E M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P
Sbjct: 410 TKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTL 469
Query: 227 IDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
I + +D+ RVA +ML G+PAVA G L LPT++ IQ+ +S P R LFR
Sbjct: 470 IRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLP---RTYRLFR 526
>AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 219 bits (534), Expect = 1e-56
Identities = 112/240 (46%), Positives = 152/240 (63%), Gaps = 3/240 (1%)
Frame = -1
Query: 758 ISQYXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXX 588
++QY GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 290 VAQYTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGG 348
Query: 587 XXXXXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVI 408
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I
Sbjct: 349 SFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEII 408
Query: 407 ARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINE 228
+E M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P
Sbjct: 409 TKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTL 468
Query: 227 IDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
I + +D+ RVA +ML G+PAVA G L LPT++ IQ+ +S P R LFR
Sbjct: 469 IRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLP---RTYRLFR 525
>BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein.
Length = 521
Score = 215 bits (525), Expect = 1e-55
Identities = 111/240 (46%), Positives = 151/240 (62%), Gaps = 3/240 (1%)
Frame = -1
Query: 758 ISQYXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXX 588
++QY GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 286 VAQYTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGG 344
Query: 587 XXXXXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVI 408
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I
Sbjct: 345 SFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEII 404
Query: 407 ARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINE 228
+E M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P
Sbjct: 405 TKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTL 464
Query: 227 IDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
I + +D+ RVA +ML G+PAVA L LPT++ IQ+ +S P R LFR
Sbjct: 465 IRNVKPEDVKRVASKMLRGKPAVAALCDLTDLPTYEHIQTALSSKDGRLP---RTYRLFR 521
>AL592301-15|CAI13946.1| 271|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 271
Score = 176 bits (429), Expect = 6e-44
Identities = 91/202 (45%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Frame = -1
Query: 749 YXGGI---EQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXXXXX 579
Y GGI E++ + L P + +PEL+HI++GLESCS + DF+ VLN
Sbjct: 1 YTGGIAKLERDMSNVSLGP-TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFS 59
Query: 578 XXXXXXXMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARE 399
M++RLY NVLNR+HWM+NAT+Y+H+Y DTGL C+HA++ P ++ + +I +E
Sbjct: 60 AGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKE 119
Query: 398 LANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDK 219
M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P I +
Sbjct: 120 FILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRE 179
Query: 218 IT--ADDIVRVAQRMLSGRPAV 159
++ + + + R+ GR A+
Sbjct: 180 YRRGSEGLPQASARLRGGRLAL 201
>BC004342-1|AAH04342.1| 143|Homo sapiens PMPCA protein protein.
Length = 143
Score = 140 bits (338), Expect = 7e-33
Identities = 71/146 (48%), Positives = 93/146 (63%)
Frame = -1
Query: 485 AYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQSMLLMNLEAR 306
+Y DTGL C+HA++ P ++ + +I +E M G V +EL RAKTQL SML+MNLE+R
Sbjct: 1 SYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESR 60
Query: 305 PVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPT 126
PV+FEDVGRQVLAT RK P I + +D+ RVA +ML G+PAVA G L LPT
Sbjct: 61 PVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPT 120
Query: 125 FDEIQSNMSLNKRDAPPQGRRLNLFR 48
++ IQ+ +S P R LFR
Sbjct: 121 YEHIQTALSSKDGRLP---RTYRLFR 143
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 86.2 bits (204), Expect = 1e-16
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -1
Query: 509 FNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMA-GKVGEIELRRAKTQLQS 333
F+ +A+N +Y D+GLF ++ S D ++ +A G + +++ AK +L++
Sbjct: 321 FDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKRIAQGNLSNTDVQAAKNKLKA 380
Query: 332 MLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGRPAVAG 153
LM++E+ E+VG Q L G PPS + +ID + DI+ A++ +SG+ ++A
Sbjct: 381 GYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAA 440
Query: 152 RGKLAHLPTFDEI 114
G L H P DE+
Sbjct: 441 SGNLGHTPFVDEL 453
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 86.2 bits (204), Expect = 1e-16
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -1
Query: 509 FNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMA-GKVGEIELRRAKTQLQS 333
F+ +A+N +Y D+GLF ++ S D ++ +A G + +++ AK +L++
Sbjct: 321 FDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKA 380
Query: 332 MLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGRPAVAG 153
LM++E+ E+VG Q L G PPS + +ID + DI+ A++ +SG+ ++A
Sbjct: 381 GYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAA 440
Query: 152 RGKLAHLPTFDEI 114
G L H P DE+
Sbjct: 441 SGNLGHTPFVDEL 453
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 86.2 bits (204), Expect = 1e-16
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -1
Query: 509 FNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMA-GKVGEIELRRAKTQLQS 333
F+ +A+N +Y D+GLF ++ S D ++ +A G + +++ AK +L++
Sbjct: 321 FDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKA 380
Query: 332 MLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGRPAVAG 153
LM++E+ E+VG Q L G PPS + +ID + DI+ A++ +SG+ ++A
Sbjct: 381 GYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAA 440
Query: 152 RGKLAHLPTFDEI 114
G L H P DE+
Sbjct: 441 SGNLGHTPFVDEL 453
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 81.0 bits (191), Expect = 4e-15
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Frame = -1
Query: 695 DLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXXXXXXXXXXXXMYTRLYTNVLNRYH 516
D L+H+ I +E+ PD + V N T N H
Sbjct: 280 DKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCH 339
Query: 515 WMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQ 336
+ ++N +Y DTGL+ ++ + + D V+ +E + V E E+ RA+ L+
Sbjct: 340 ---SFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLK 396
Query: 335 SMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGR-PAV 159
+ +L+ L+ + ED+GRQ+L +R P ID + A+ I V + + R PA+
Sbjct: 397 TNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAI 456
Query: 158 AGRGKLAHLPTFDEIQSNM 102
A G + LP F +I+SNM
Sbjct: 457 AAVGPIKQLPDFKQIRSNM 475
>AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein
protein.
Length = 316
Score = 81.0 bits (191), Expect = 4e-15
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Frame = -1
Query: 695 DLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXXXXXXXXXXXXMYTRLYTNVLNRYH 516
D L+H+ I +E+ PD + V N T N H
Sbjct: 116 DKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCH 175
Query: 515 WMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQ 336
+ ++N +Y DTGL+ ++ + + D V+ +E + V E E+ RA+ L+
Sbjct: 176 ---SFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLK 232
Query: 335 SMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGR-PAV 159
+ +L+ L+ + ED+GRQ+L +R P ID + A+ I V + + R PA+
Sbjct: 233 TNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAI 292
Query: 158 AGRGKLAHLPTFDEIQSNM 102
A G + LP F +I+SNM
Sbjct: 293 AAVGPIKQLPDFKQIRSNM 311
>AK129769-1|BAC85231.1| 149|Homo sapiens D1). protein.
Length = 149
Score = 74.9 bits (176), Expect = 3e-13
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Frame = -1
Query: 389 MAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKIT- 213
M G V +EL RAKTQL SML+MNLE+RPV+FEDVGRQVLAT RK P I +
Sbjct: 1 MGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIREYRR 60
Query: 212 -ADDIVRVAQRMLSGRPAV 159
++ +++ + R+ GR A+
Sbjct: 61 GSEGLLQASARLRGGRLAL 79
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 69.3 bits (162), Expect = 1e-11
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 1/202 (0%)
Frame = -1
Query: 695 DLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXXXXXXXXXXXXMYTRLYTNVLNRYH 516
D L+H+ I +E+ PD + V N T N H
Sbjct: 289 DKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCH 348
Query: 515 WMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQ 336
+ ++N +Y DTGL+ ++ + + D V+ +E + V E E+ RA+ L+
Sbjct: 349 ---SFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLK 405
Query: 335 SMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGR-PAV 159
+ +L+ L+ + ED+GRQ+L +R P ID + A+ I V + + R PA+
Sbjct: 406 TNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAI 465
Query: 158 AGRGKLAHLPTFDEIQSNMSLN 93
A GK + ++ + +N
Sbjct: 466 AAVGKPGFFSSMQKVGQVLLIN 487
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 65.7 bits (153), Expect = 2e-10
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 1/199 (0%)
Frame = -1
Query: 695 DLPELSHIVIGLESCSHGDPDFVATCVLNXXXXXXXXXXXXXXXXXMYTRLYTNVLNRYH 516
D +H+ I +E PD VA V N V N+
Sbjct: 280 DALPFAHVAIAVEGPGWASPDSVALQVANAIIGHYDCTYGGGVHLSS-PLASGAVANKLC 338
Query: 515 WMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQ 336
F ++ Y +TGL H +I D V+ + + E E+ R K L+
Sbjct: 339 QSFQ--TFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILR 396
Query: 335 SMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGR-PAV 159
+ L+ +L+ V ED+GR +L G+R P + + + I ++ A + + + + + PAV
Sbjct: 397 NALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAV 456
Query: 158 AGRGKLAHLPTFDEIQSNM 102
AG G + LP ++ I+S M
Sbjct: 457 AGYGPIEQLPDYNRIRSGM 475
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 65.7 bits (153), Expect = 2e-10
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = -1
Query: 494 YNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQSMLLMNL 315
++ Y +TGL H +I D V+ + + E E+ R K L++ L+ +L
Sbjct: 344 FSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHL 403
Query: 314 EARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGR-PAVAGRGKLA 138
+ V ED+GR +L G+R P + + + I ++ A + + + + + PAVAG G +
Sbjct: 404 DGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIE 463
Query: 137 HLPTFDEIQSNM 102
LP ++ I+S M
Sbjct: 464 QLPDYNRIRSGM 475
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 65.7 bits (153), Expect = 2e-10
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Frame = -1
Query: 494 YNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQSMLLMNL 315
++ Y +TGL H +I D V+ + + E E+ R K L++ L+ +L
Sbjct: 344 FSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHL 403
Query: 314 EARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGR-PAVAGRGKLA 138
+ V ED+GR +L G+R P + + + I ++ A + + + + + PAVAG G +
Sbjct: 404 DGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIE 463
Query: 137 HLPTFDEIQSNM 102
LP ++ I+S M
Sbjct: 464 QLPDYNRIRSGM 475
>BC114360-1|AAI14361.1| 57|Homo sapiens PMPCA protein protein.
Length = 57
Score = 45.2 bits (102), Expect = 3e-04
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = -1
Query: 209 DDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFR 48
+D+ RVA +ML G+PAVA G L LPT++ IQ+ +S P R LFR
Sbjct: 7 EDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLP---RTYRLFR 57
>BC007439-1|AAH07439.1| 582|Homo sapiens DCP1 decapping enzyme
homolog A (S. cerevisiae) protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 118 SSNVGRCASFPRPATAGLPLSIRCATLTMSSAVILS--ISLMKNEGGFL 258
SS++ R AS P P T G P S R ++ +S + + I L+KN+ FL
Sbjct: 514 SSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFL 562
>AY146651-1|AAN62763.1| 582|Homo sapiens decapping enzyme hDcp1a
protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 118 SSNVGRCASFPRPATAGLPLSIRCATLTMSSAVILS--ISLMKNEGGFL 258
SS++ R AS P P T G P S R ++ +S + + I L+KN+ FL
Sbjct: 514 SSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFL 562
>AK001969-1|BAA92008.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ11107 fis, clone PLACE1005803. ).
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 118 SSNVGRCASFPRPATAGLPLSIRCATLTMSSAVILS--ISLMKNEGGFL 258
SS++ R AS P P T G P S R ++ +S + + I L+KN+ FL
Sbjct: 514 SSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFL 562
>AJ275986-1|CAB77023.1| 582|Homo sapiens transcription factor
protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 118 SSNVGRCASFPRPATAGLPLSIRCATLTMSSAVILS--ISLMKNEGGFL 258
SS++ R AS P P T G P S R ++ +S + + I L+KN+ FL
Sbjct: 514 SSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFL 562
>AB075507-1|BAE45754.1| 582|Homo sapiens putative protein product
of Nbla00360 protein.
Length = 582
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 118 SSNVGRCASFPRPATAGLPLSIRCATLTMSSAVILS--ISLMKNEGGFL 258
SS++ R AS P P T G P S R ++ +S + + I L+KN+ FL
Sbjct: 514 SSDLERKASSPSPLTIGTPESQRKPSIILSKSQLQDTLIHLIKNDSSFL 562
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,529,372
Number of Sequences: 237096
Number of extensions: 2268928
Number of successful extensions: 4986
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4970
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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