Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14n24
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor, mi... 260 4e-69
AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1 pr... 260 4e-69
AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G pro... 258 1e-68
BC030612-1|AAH30612.1| 777|Homo sapiens G elongation factor, mi... 60 7e-09
BC015712-1|AAH15712.1| 779|Homo sapiens GFM2 protein protein. 60 7e-09
AF367997-1|AAK53401.1| 779|Homo sapiens elongation factor G2 pr... 60 7e-09
AF111808-1|AAL39010.1| 732|Homo sapiens MSTP027 protein. 60 7e-09
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 43 9e-04
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 43 9e-04
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 43 9e-04
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 43 9e-04
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 43 9e-04
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 43 9e-04
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 40 0.006
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 40 0.006
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 40 0.006
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 40 0.008
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 36 0.18
AF465820-1|AAL75985.1| 508|Homo sapiens activator of S-phase ki... 34 0.55
BC053659-1|AAH53659.1| 100|Homo sapiens LRRC25 protein protein. 31 3.9
BC025744-1|AAH25744.1| 100|Homo sapiens LRRC25 protein protein. 31 3.9
AY358729-1|AAQ89091.1| 567|Homo sapiens KPVW3022 protein. 30 8.9
AK075250-1|BAC11498.1| 640|Homo sapiens protein ( Homo sapiens ... 30 8.9
>BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor,
mitochondrial 1 protein.
Length = 751
Score = 260 bits (636), Expect = 4e-69
Identities = 119/205 (58%), Positives = 149/205 (72%)
Frame = -3
Query: 677 HKKQSGGAGQYARVSGIIEPLPPHQNTVLEFVDETVGTNIPKQFVPGVERGFLDTCEKGY 498
HKKQSGGAGQY +V G++EPL P T LEF DET G+NIPKQFVP VE+GFLD CEKG
Sbjct: 539 HKKQSGGAGQYGKVIGVLEPLDPEDYTKLEFSDETFGSNIPKQFVPAVEKGFLDACEKGP 598
Query: 497 LSGHKVSGVKFRLQDGAHHIVDSSELAFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPD 318
LSGHK+SG++F LQDGAHH+VDS+E++F A +GA+K ILEP+M VEV P+
Sbjct: 599 LSGHKLSGLRFVLQDGAHHMVDSNEISFIRAGEGALKQALANATLCILEPIMAVEVVAPN 658
Query: 317 EFHGTVVGQLNKRXXXXXXXXXXXGWTSIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYS 138
EF G V+ +N+R + ++YA+VPLN+MFGY+ ELRS T+GKGE++MEYS
Sbjct: 659 EFQGQVIAGINRRHGVITGQDGVEDYFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYS 718
Query: 137 RYSPCLPDVQEQLIRKHQEEMGLLP 63
RY PCLP QE +I K+ E G LP
Sbjct: 719 RYQPCLPSTQEDVINKYLEATGQLP 743
>AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1
protein.
Length = 751
Score = 260 bits (636), Expect = 4e-69
Identities = 119/205 (58%), Positives = 149/205 (72%)
Frame = -3
Query: 677 HKKQSGGAGQYARVSGIIEPLPPHQNTVLEFVDETVGTNIPKQFVPGVERGFLDTCEKGY 498
HKKQSGGAGQY +V G++EPL P T LEF DET G+NIPKQFVP VE+GFLD CEKG
Sbjct: 539 HKKQSGGAGQYGKVIGVLEPLDPEDYTKLEFSDETFGSNIPKQFVPAVEKGFLDACEKGP 598
Query: 497 LSGHKVSGVKFRLQDGAHHIVDSSELAFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPD 318
LSGHK+SG++F LQDGAHH+VDS+E++F A +GA+K ILEP+M VEV P+
Sbjct: 599 LSGHKLSGLRFVLQDGAHHMVDSNEISFIRAGEGALKQALANATLCILEPIMAVEVVAPN 658
Query: 317 EFHGTVVGQLNKRXXXXXXXXXXXGWTSIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYS 138
EF G V+ +N+R + ++YA+VPLN+MFGY+ ELRS T+GKGE++MEYS
Sbjct: 659 EFQGQVIAGINRRHGVITGQDGVEDYFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYS 718
Query: 137 RYSPCLPDVQEQLIRKHQEEMGLLP 63
RY PCLP QE +I K+ E G LP
Sbjct: 719 RYQPCLPSTQEDVINKYLEATGQLP 743
>AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G protein.
Length = 751
Score = 258 bits (633), Expect = 1e-68
Identities = 118/205 (57%), Positives = 149/205 (72%)
Frame = -3
Query: 677 HKKQSGGAGQYARVSGIIEPLPPHQNTVLEFVDETVGTNIPKQFVPGVERGFLDTCEKGY 498
HKKQSGGAGQY +V G++EPL P T LEF DET G+N+PKQFVP VE+GFLD CEKG
Sbjct: 539 HKKQSGGAGQYGKVIGVLEPLDPEDYTKLEFSDETFGSNMPKQFVPAVEKGFLDACEKGP 598
Query: 497 LSGHKVSGVKFRLQDGAHHIVDSSELAFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPD 318
LSGHK+SG++F LQDGAHH+VDS+E++F A +GA+K ILEP+M VEV P+
Sbjct: 599 LSGHKLSGLRFVLQDGAHHMVDSNEISFIRAGEGALKQALANATLCILEPIMAVEVVAPN 658
Query: 317 EFHGTVVGQLNKRXXXXXXXXXXXGWTSIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYS 138
EF G V+ +N+R + ++YA+VPLN+MFGY+ ELRS T+GKGE++MEYS
Sbjct: 659 EFQGQVIAGINRRHGVITGQDGVEDYFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYS 718
Query: 137 RYSPCLPDVQEQLIRKHQEEMGLLP 63
RY PCLP QE +I K+ E G LP
Sbjct: 719 RYQPCLPSTQEDVINKYLEATGQLP 743
>BC030612-1|AAH30612.1| 777|Homo sapiens G elongation factor,
mitochondrial 2 protein.
Length = 777
Score = 60.1 bits (139), Expect = 7e-09
Identities = 42/169 (24%), Positives = 72/169 (42%)
Frame = -3
Query: 596 VLEFVDETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHIVDSSELA 417
V+E+ E++ + K +E G C +G L G + V L H S+ +
Sbjct: 606 VIEYA-ESINEGLLKVSQEAIENGIHSACLQGPLLGSPIQDVAITLHSLTIHPGTSTTMI 664
Query: 416 FFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGWT 237
++ V+ Q+LEP+M +EVT+ ++ V+ L +R
Sbjct: 665 SACVSR-CVQKALKKADKQVLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDNK 723
Query: 236 SIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLPDVQEQLIRK 90
+ VPL + GY+ LR++T G F++E S Y P Q L+ +
Sbjct: 724 VVIGFVPLAGIMGYSTVLRTLTSGSATFALELSTYQAMNPQDQNTLLNR 772
>BC015712-1|AAH15712.1| 779|Homo sapiens GFM2 protein protein.
Length = 779
Score = 60.1 bits (139), Expect = 7e-09
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Frame = -3
Query: 596 VLEF-VDETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHIVDSSEL 420
V+EF E++ + K +E G C +G L G + V L H S+ +
Sbjct: 606 VIEFEYAESINEGLLKVSQEAIENGIHSACLQGPLLGSPIQDVAITLHSLTIHPGTSTTM 665
Query: 419 AFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGW 240
++ V+ Q+LEP+M +EVT+ ++ V+ L +R
Sbjct: 666 ISACVSR-CVQKALKKADKQVLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDN 724
Query: 239 TSIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLPDVQEQLIRK 90
+ VPL + GY+ LR++T G F++E S Y P Q L+ +
Sbjct: 725 KVVIGFVPLAEIMGYSTVLRTLTSGSATFALELSTYQAMNPQDQNTLLNR 774
>AF367997-1|AAK53401.1| 779|Homo sapiens elongation factor G2
protein.
Length = 779
Score = 60.1 bits (139), Expect = 7e-09
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Frame = -3
Query: 596 VLEF-VDETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHIVDSSEL 420
V+EF E++ + K +E G C +G L G + V L H S+ +
Sbjct: 606 VIEFEYAESINEGLLKVSQEAIENGIHSACLQGPLLGSPIQDVAITLHSLTIHPGTSTTM 665
Query: 419 AFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGW 240
++ V+ Q+LEP+M +EVT+ ++ V+ L +R
Sbjct: 666 ISACVSR-CVQKALKKADKQVLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDN 724
Query: 239 TSIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLPDVQEQLIRK 90
+ VPL + GY+ LR++T G F++E S Y P Q L+ +
Sbjct: 725 KVVIGFVPLAEIMGYSTVLRTLTSGSATFALELSTYQAMNPQDQNTLLNR 774
>AF111808-1|AAL39010.1| 732|Homo sapiens MSTP027 protein.
Length = 732
Score = 60.1 bits (139), Expect = 7e-09
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Frame = -3
Query: 596 VLEF-VDETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHIVDSSEL 420
V+EF E++ + K +E G C +G L G + V L H S+ +
Sbjct: 559 VIEFEYAESINEGLLKVSQEAIENGIHSACLQGPLLGSPIQDVAITLHSLTIHPGTSTTM 618
Query: 419 AFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGW 240
++ V+ Q+LEP+M +EVT+ ++ V+ L +R
Sbjct: 619 ISACVSR-CVQKALKKADKQVLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDN 677
Query: 239 TSIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLPDVQEQLIRK 90
+ VPL + GY+ LR++T G F++E S Y P Q L+ +
Sbjct: 678 KVVIGFVPLAEIMGYSTVLRTLTSGSATFALELSTYQAMNPQDQNTLLNR 727
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 43.2 bits (97), Expect = 9e-04
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = -3
Query: 581 DETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHI--VDSSELAFFL 408
D T G + V GF ++G L + GV+F + D H +
Sbjct: 664 DITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIP 723
Query: 407 AAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGWTS-- 234
A+ + +++EP+ VE+ P++ G + G LN++ G
Sbjct: 724 TARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFV 783
Query: 233 IYAEVPLNNMFGYAGELRSMTQGK 162
+ A +P+N FG+ +LRS T G+
Sbjct: 784 VKAYLPVNESFGFTADLRSNTGGQ 807
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 43.2 bits (97), Expect = 9e-04
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = -3
Query: 581 DETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHI--VDSSELAFFL 408
D T G + V GF ++G L + GV+F + D H +
Sbjct: 664 DITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIP 723
Query: 407 AAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGWTS-- 234
A+ + +++EP+ VE+ P++ G + G LN++ G
Sbjct: 724 TARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFV 783
Query: 233 IYAEVPLNNMFGYAGELRSMTQGK 162
+ A +P+N FG+ +LRS T G+
Sbjct: 784 VKAYLPVNESFGFTADLRSNTGGQ 807
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 43.2 bits (97), Expect = 9e-04
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = -3
Query: 581 DETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHI--VDSSELAFFL 408
D T G + V GF ++G L + GV+F + D H +
Sbjct: 164 DITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIP 223
Query: 407 AAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGWTS-- 234
A+ + +++EP+ VE+ P++ G + G LN++ G
Sbjct: 224 TARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFV 283
Query: 233 IYAEVPLNNMFGYAGELRSMTQGK 162
+ A +P+N FG+ +LRS T G+
Sbjct: 284 VKAYLPVNESFGFTADLRSNTGGQ 307
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 43.2 bits (97), Expect = 9e-04
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = -3
Query: 581 DETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHI--VDSSELAFFL 408
D T G + V GF ++G L + GV+F + D H +
Sbjct: 664 DITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIP 723
Query: 407 AAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGWTS-- 234
A+ + +++EP+ VE+ P++ G + G LN++ G
Sbjct: 724 TARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFV 783
Query: 233 IYAEVPLNNMFGYAGELRSMTQGK 162
+ A +P+N FG+ +LRS T G+
Sbjct: 784 VKAYLPVNESFGFTADLRSNTGGQ 807
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 43.2 bits (97), Expect = 9e-04
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = -3
Query: 581 DETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHI--VDSSELAFFL 408
D T G + V GF ++G L + GV+F + D H +
Sbjct: 323 DITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIP 382
Query: 407 AAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGWTS-- 234
A+ + +++EP+ VE+ P++ G + G LN++ G
Sbjct: 383 TARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFV 442
Query: 233 IYAEVPLNNMFGYAGELRSMTQGK 162
+ A +P+N FG+ +LRS T G+
Sbjct: 443 VKAYLPVNESFGFTADLRSNTGGQ 466
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 43.2 bits (97), Expect = 9e-04
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = -3
Query: 581 DETVGTNIPKQFVPGVERGFLDTCEKGYLSGHKVSGVKFRLQDGAHHI--VDSSELAFFL 408
D T G + V GF ++G L + GV+F + D H +
Sbjct: 664 DITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIP 723
Query: 407 AAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXGWTS-- 234
A+ + +++EP+ VE+ P++ G + G LN++ G
Sbjct: 724 TARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFV 783
Query: 233 IYAEVPLNNMFGYAGELRSMTQGK 162
+ A +P+N FG+ +LRS T G+
Sbjct: 784 VKAYLPVNESFGFTADLRSNTGGQ 807
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 40.3 bits (90), Expect = 0.006
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Frame = -3
Query: 584 VDETVGTNIPKQFVPGVE----RGFLDTCEKGYLSGHKVSGVKFRLQDG--AHHIVDSSE 423
VD+T+ + + K + V+ +GF +G L + VKF++ D A +
Sbjct: 751 VDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGG 810
Query: 422 LAFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXG 243
A+ V F + +++EP FVEV P + V L +R G
Sbjct: 811 GQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPG 870
Query: 242 WT--SIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLP 117
+I A +P + FG+ +LR+ TQG+ FS+ + +P
Sbjct: 871 SPLYTIKAFIPAIDSFGFETDLRTHTQGQA-FSLSVFHHWQIVP 913
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 40.3 bits (90), Expect = 0.006
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Frame = -3
Query: 584 VDETVGTNIPKQFVPGVE----RGFLDTCEKGYLSGHKVSGVKFRLQDG--AHHIVDSSE 423
VD+T+ + + K + V+ +GF +G L + VKF++ D A +
Sbjct: 746 VDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGG 805
Query: 422 LAFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXG 243
A+ V F + +++EP FVEV P + V L +R G
Sbjct: 806 GQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPG 865
Query: 242 WT--SIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLP 117
+I A +P + FG+ +LR+ TQG+ FS+ + +P
Sbjct: 866 SPLYTIKAFIPAIDSFGFETDLRTHTQGQA-FSLSVFHHWQIVP 908
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 40.3 bits (90), Expect = 0.006
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Frame = -3
Query: 584 VDETVGTNIPKQFVPGVE----RGFLDTCEKGYLSGHKVSGVKFRLQDG--AHHIVDSSE 423
VD+T+ + + K + V+ +GF +G L + VKF++ D A +
Sbjct: 746 VDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGG 805
Query: 422 LAFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXG 243
A+ V F + +++EP FVEV P + V L +R G
Sbjct: 806 GQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPG 865
Query: 242 WT--SIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLP 117
+I A +P + FG+ +LR+ TQG+ FS+ + +P
Sbjct: 866 SPLYTIKAFIPAIDSFGFETDLRTHTQGQA-FSLSVFHHWQIVP 908
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 39.9 bits (89), Expect = 0.008
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Frame = -3
Query: 584 VDETVGTNIPKQFVPGVE----RGFLDTCEKGYLSGHKVSGVKFRLQDG--AHHIVDSSE 423
VD+T+ + + K + V+ +GF +G L + VKF++ D A +
Sbjct: 624 VDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQKPLHRGG 683
Query: 422 LAFFLAAKGAVKDVFDVGAWQILEPVMFVEVTLPDEFHGTVVGQLNKRXXXXXXXXXXXG 243
A+ V F + +++EP FVEV P + V L +R G
Sbjct: 684 GQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPG 743
Query: 242 WT--SIYAEVPLNNMFGYAGELRSMTQGKGEFSMEYSRYSPCLP 117
+I A +P + FG+ +LR+ TQG+ FS+ + +P
Sbjct: 744 SPLYTIKAFIPAIDSFGFETDLRTHTQGQA-FSLSVFHHWQIVP 786
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 35.5 bits (78), Expect = 0.18
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +1
Query: 298 TTVPWNSSGNVTSTNMTGSSICHAPTSKTSLTAPLAAKKNASSLESTMWWAPS*SLNFTP 477
TT P S VT +++ G++ H PT T+ T P+A A+ ST SL T
Sbjct: 2511 TTTPTTSGSTVTPSSIPGTT--HTPTVLTTTTQPVATGSMATPSSSTQTSGTPPSLITTA 2568
Query: 478 ETLCPDR*PFSHVSRKPLSTPGT 546
T+ + + P STPGT
Sbjct: 2569 TTITA-----TGSTTNPSSTPGT 2586
>AF465820-1|AAL75985.1| 508|Homo sapiens activator of S-phase
kinase-like protein 1 protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.55
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 280 RLLSCPTTVPWNSSGNVTSTNMTGSSICHAPTSKTSLTAPLAAKKNASSLESTMWWAP 453
+LLSCPT W S+ ++T++ S + TSL PL A AS S WAP
Sbjct: 407 QLLSCPTAPGWPSAPLYSATSVQPSG-APVESRSTSLLQPLPASAGASC--SRCLWAP 461
>BC053659-1|AAH53659.1| 100|Homo sapiens LRRC25 protein protein.
Length = 100
Score = 31.1 bits (67), Expect = 3.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +1
Query: 286 LSC-PT-TVPWNSSGNVTSTNMTGSSICHAPTSKTSLTAPLAAKKNASSLE-----STMW 444
L+C PT TVPW+ T S+C A T T L + ++A+ L S W
Sbjct: 10 LTCRPTATVPWSPGTTSAETTALARSLCSAGTQPAPSTTSLPSWRSAAPLAWPLQLSGQW 69
Query: 445 WA 450
W+
Sbjct: 70 WS 71
>BC025744-1|AAH25744.1| 100|Homo sapiens LRRC25 protein protein.
Length = 100
Score = 31.1 bits (67), Expect = 3.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +1
Query: 286 LSC-PT-TVPWNSSGNVTSTNMTGSSICHAPTSKTSLTAPLAAKKNASSLE-----STMW 444
L+C PT TVPW+ T S+C A T T L + ++A+ L S W
Sbjct: 10 LTCRPTATVPWSPGTTSAETTALARSLCSAGTQPAPSTTSLPSWRSAAPLAWPLQLSGQW 69
Query: 445 WA 450
W+
Sbjct: 70 WS 71
>AY358729-1|AAQ89091.1| 567|Homo sapiens KPVW3022 protein.
Length = 567
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = -3
Query: 509 EKGYLSGHKVSGVKFR---LQDGAHHIV 435
EKGY +GH G+K R L AHHI+
Sbjct: 207 EKGYETGHHAPGLKLRGTGLYKAAHHII 234
>AK075250-1|BAC11498.1| 640|Homo sapiens protein ( Homo sapiens
cDNA FLJ90769 fis, clone THYRO1000846. ).
Length = 640
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 289 SCPTTVPWNSSGNVTSTNMTGSSICHAPTSKTSLTAP 399
SC TT PW +S + S++ + + PTS + T P
Sbjct: 568 SCATTAPWTASASPASSSSSTTPRRCPPTSSPASTCP 604
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,385,682
Number of Sequences: 237096
Number of extensions: 2226025
Number of successful extensions: 5568
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5547
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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