Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14n23
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012044-1|AAH12044.1| 304|Homo sapiens small glutamine-rich te... 84 4e-16
AK096321-1|BAC04761.1| 304|Homo sapiens protein ( Homo sapiens ... 84 4e-16
AF368281-1|AAP29459.1| 304|Homo sapiens small glutamine rich pr... 84 4e-16
AF075050-1|AAC28459.1| 120|Homo sapiens H_YN88E09.1 protein. 84 4e-16
CR542282-1|CAG47077.1| 313|Homo sapiens alpha; complete cds, wi... 84 5e-16
CR533517-1|CAG38548.1| 313|Homo sapiens alpha; complete cds, in... 84 5e-16
BC008885-1|AAH08885.1| 313|Homo sapiens small glutamine-rich te... 84 5e-16
BC005165-1|AAH05165.1| 313|Homo sapiens small glutamine-rich te... 84 5e-16
BC002989-1|AAH02989.2| 313|Homo sapiens small glutamine-rich te... 84 5e-16
BC000390-1|AAH00390.1| 313|Homo sapiens small glutamine-rich te... 84 5e-16
AJ223828-1|CAA11565.1| 313|Homo sapiens small glutamine-rich te... 84 5e-16
AJ133129-1|CAB39725.1| 313|Homo sapiens small glutamine-rich te... 84 5e-16
AF408399-1|AAL01051.1| 313|Homo sapiens TPR-containing co-chape... 84 5e-16
AF368279-1|AAP29457.1| 313|Homo sapiens small glutamine rich pr... 84 5e-16
AC006538-2|AAD13117.1| 313|Homo sapiens small glutamine-rich te... 84 5e-16
BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein. 36 0.14
BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein. 36 0.14
AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein. 36 0.14
AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein. 36 0.14
AK074535-1|BAC11045.1| 316|Homo sapiens protein ( Homo sapiens ... 36 0.14
AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein. 36 0.14
AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein. 36 0.14
AB209468-1|BAD92705.1| 325|Homo sapiens ubiquilin 1 isoform 1 v... 36 0.14
AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein. 36 0.14
BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein. 35 0.31
BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein. 35 0.31
AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein. 35 0.31
AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein. 35 0.31
AF113544-1|AAF19084.1| 444|Homo sapiens HRIHFB2157-like protein... 35 0.31
AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like... 35 0.31
BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein. 33 0.72
AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein pr... 33 0.72
AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein. 33 0.72
AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein. 33 0.72
AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product ... 33 0.72
BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein. 30 6.7
BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein. 30 6.7
BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein. 30 6.7
BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein. 30 6.7
AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein. 30 6.7
AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein. 30 6.7
AL365181-16|CAI13060.1| 671|Homo sapiens brevican protein. 30 6.7
AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein. 30 6.7
AF229053-1|AAG23135.1| 671|Homo sapiens chondroitin sulfate pro... 30 6.7
AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate pro... 30 6.7
AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 vari... 30 6.7
>BC012044-1|AAH12044.1| 304|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, beta protein.
Length = 304
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
N+SY+ NL++A+Q L + + D++ L+ NPA I+MA ++ NP +Q L+SG+M
Sbjct: 186 NDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMM 245
Query: 528 TTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 388
T G G +++L++ GQ AQQ+Q NP+L+EQLR +R
Sbjct: 246 TNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 292
>AK096321-1|BAC04761.1| 304|Homo sapiens protein ( Homo sapiens
cDNA FLJ39002 fis, clone NT2RI2024008, moderately
similar to SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE
REPEAT-CONTAINING PROTEIN. ).
Length = 304
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
N+SY+ NL++A+Q L + + D++ L+ NPA I+MA ++ NP +Q L+SG+M
Sbjct: 186 NDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMM 245
Query: 528 TTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 388
T G G +++L++ GQ AQQ+Q NP+L+EQLR +R
Sbjct: 246 TNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 292
>AF368281-1|AAP29459.1| 304|Homo sapiens small glutamine rich
protein with tetratricopeptide repeats 2 protein.
Length = 304
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
N+SY+ NL++A+Q L + + D++ L+ NPA I+MA ++ NP +Q L+SG+M
Sbjct: 186 NDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMM 245
Query: 528 TTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 388
T G G +++L++ GQ AQQ+Q NP+L+EQLR +R
Sbjct: 246 TNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 292
>AF075050-1|AAC28459.1| 120|Homo sapiens H_YN88E09.1 protein.
Length = 120
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
N+SY+ NL++A+Q L + + D++ L+ NPA I+MA ++ NP +Q L+SG+M
Sbjct: 2 NDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMM 61
Query: 528 TTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDLVEQLRRQLR 388
T G G +++L++ GQ AQQ+Q NP+L+EQLR +R
Sbjct: 62 TNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIR 108
>CR542282-1|CAG47077.1| 313|Homo sapiens alpha; complete cds,
without stopcodon. protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>CR533517-1|CAG38548.1| 313|Homo sapiens alpha; complete cds, incl.
stopcodon. protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>BC008885-1|AAH08885.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>BC005165-1|AAH05165.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>BC002989-1|AAH02989.2| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>BC000390-1|AAH00390.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat (TPR)-containing, alpha
protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>AJ223828-1|CAA11565.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide (SGT) protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>AJ133129-1|CAB39725.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide repeat containing protein protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>AF408399-1|AAL01051.1| 313|Homo sapiens TPR-containing
co-chaperone protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>AF368279-1|AAP29457.1| 313|Homo sapiens small glutamine rich
protein with tetratricopeptide repeats 1 protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>AC006538-2|AAD13117.1| 313|Homo sapiens small glutamine-rich
tetratricopeptide (SGT) protein.
Length = 313
Score = 83.8 bits (198), Expect = 5e-16
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Frame = -3
Query: 684 NESYRENLQLADQTLAQRPN--------DLSGLLRNPALINMATEMLTNPNMQNLISGLM 529
NE+Y+ NL++A+ L + P+ D++GLL NP ++MA+ ++ NP +Q L+SG++
Sbjct: 192 NETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMI 251
Query: 528 TTTGGAQGVGEVPPG--GINALLEVGQSLAQQMQAANPDLVEQLRRQLR---PPGSGENQ 364
+ G P + +L++ GQ AQQMQ NP+L+EQLR Q+R P S ++Q
Sbjct: 252 SGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQ 311
>BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>AK074535-1|BAC11045.1| 316|Homo sapiens protein ( Homo sapiens
cDNA FLJ90054 fis, clone HEMBA1002992, weakly similar to
UBIQUITIN-LIKE PROTEIN DSK2. ).
Length = 316
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>AB209468-1|BAD92705.1| 325|Homo sapiens ubiquilin 1 isoform 1
variant protein.
Length = 325
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 122 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 178
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 179 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 221
>AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.14
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S +L NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 216 QQLIQRNPEISHMLNNPDIMRQTLELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 272
Query: 468 LEVGQSLAQQMQAANPDLV--EQLRRQLRPPGSGENQPPSQ*E 346
+ + + M +A + + SGE PS+ E
Sbjct: 273 RRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTE 315
>BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L +R ++S +L NP L+ E+ NP M + +M A E PGG NAL
Sbjct: 226 QQLMERNPEISHMLNNPELMRQTMELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 282
Query: 468 LEVGQSLAQQMQAA 427
+ + + M +A
Sbjct: 283 RRMYTDIQEPMFSA 296
>BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L +R ++S +L NP L+ E+ NP M + +M A E PGG NAL
Sbjct: 226 QQLMERNPEISHMLNNPELMRQTMELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 282
Query: 468 LEVGQSLAQQMQAA 427
+ + + M +A
Sbjct: 283 RRMYTDIQEPMFSA 296
>AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L +R ++S +L NP L+ E+ NP M + +M A E PGG NAL
Sbjct: 226 QQLMERNPEISHMLNNPELMRQTMELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 282
Query: 468 LEVGQSLAQQMQAA 427
+ + + M +A
Sbjct: 283 RRMYTDIQEPMFSA 296
>AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein.
Length = 601
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L +R ++S +L NP L+ E+ NP M + +M A E PGG NAL
Sbjct: 226 QQLMERNPEISHMLNNPELMRQTMELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 282
Query: 468 LEVGQSLAQQMQAA 427
+ + + M +A
Sbjct: 283 RRMYTDIQEPMFSA 296
>AF113544-1|AAF19084.1| 444|Homo sapiens HRIHFB2157-like protein
protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L +R ++S +L NP L+ E+ NP M + +M A E PGG NAL
Sbjct: 69 QQLMERNPEISHMLNNPELMRQTMELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 125
Query: 468 LEVGQSLAQQMQAA 427
+ + + M +A
Sbjct: 126 RRMYTDIQEPMFSA 139
>AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like
interacting protein variant protein.
Length = 600
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L +R ++S +L NP L+ E+ NP M + +M A E PGG NAL
Sbjct: 225 QQLMERNPEISHMLNNPELMRQTMELARNPAM---MQEMMRNQDRALSNLESIPGGYNAL 281
Query: 468 LEVGQSLAQQMQAA 427
+ + + M +A
Sbjct: 282 RRMYTDIQEPMFSA 295
>BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein.
Length = 624
Score = 33.5 bits (73), Expect = 0.72
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S LL NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 212 QQLIQRNPEISHLLNNPDIMRQTLEIARNPAM---MQEMMRNQDLALSNLESIPGGYNAL 268
Query: 468 LEVGQSLAQQM 436
+ + + M
Sbjct: 269 RRMYTDIQEPM 279
>AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein
protein.
Length = 588
Score = 33.5 bits (73), Expect = 0.72
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S LL NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 176 QQLIQRNPEISHLLNNPDIMRQTLEIARNPAM---MQEMMRNQDLALSNLESIPGGYNAL 232
Query: 468 LEVGQSLAQQM 436
+ + + M
Sbjct: 233 RRMYTDIQEPM 243
>AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein.
Length = 624
Score = 33.5 bits (73), Expect = 0.72
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S LL NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 212 QQLIQRNPEISHLLNNPDIMRQTLEIARNPAM---MQEMMRNQDLALSNLESIPGGYNAL 268
Query: 468 LEVGQSLAQQM 436
+ + + M
Sbjct: 269 RRMYTDIQEPM 279
>AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein.
Length = 624
Score = 33.5 bits (73), Expect = 0.72
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S LL NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 212 QQLIQRNPEISHLLNNPDIMRQTLEIARNPAM---MQEMMRNQDLALSNLESIPGGYNAL 268
Query: 468 LEVGQSLAQQM 436
+ + + M
Sbjct: 269 RRMYTDIQEPM 279
>AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product
Chap1/Dsk2 protein.
Length = 624
Score = 33.5 bits (73), Expect = 0.72
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 648 QTLAQRPNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINAL 469
Q L QR ++S LL NP ++ E+ NP M + +M A E PGG NAL
Sbjct: 212 QQLIQRNPEISHLLNNPDIMRQTLEIARNPAM---MQEMMRNQDLALSNLESIPGGYNAL 268
Query: 468 LEVGQSLAQQM 436
+ + + M
Sbjct: 269 RRMYTDIQEPM 279
>BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>AL365181-16|CAI13060.1| 671|Homo sapiens brevican protein.
Length = 671
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>AF229053-1|AAG23135.1| 671|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 671
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 911
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 523 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 582
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 583 EETGSSEGAPSLLPATR---APEGTRELEAPSE 612
>AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 variant
protein.
Length = 850
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -3
Query: 630 PNDLSGLLRNPALINMATEMLTNPNMQNLISGLMTTTGGAQGVGEVPPGGINALLEVGQS 451
P+ S R P + TE L P +NL S +T A+ VGE G + + G+S
Sbjct: 462 PDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGES 521
Query: 450 LAQQMQAANPDLVEQLRRQLRPPGSGENQPPSQ 352
P L+ R P G+ E + PS+
Sbjct: 522 EETGSSEGAPSLLPATR---APEGTRELEAPSE 551
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,521,830
Number of Sequences: 237096
Number of extensions: 2151531
Number of successful extensions: 5219
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 5022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5208
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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