Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14n13
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for ... 283 6e-76
BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,... 282 1e-75
BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,... 282 1e-75
AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,... 282 1e-75
AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,... 282 1e-75
AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing su... 281 1e-75
X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide dism... 281 3e-75
X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for ... 281 3e-75
Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for ... 280 3e-75
X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide dism... 280 3e-75
M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human manganese... 280 3e-75
X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for ... 280 4e-75
AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing su... 276 7e-74
AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing su... 276 7e-74
DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing su... 275 1e-73
AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing su... 274 2e-73
AL135914-2|CAI21846.1| 161|Homo sapiens superoxide dismutase 2,... 89 1e-17
L34157-1|AAA83933.1| 75|Homo sapiens manganese superoxide dism... 89 2e-17
BC016934-1|AAH16934.1| 140|Homo sapiens SOD2 protein protein. 89 2e-17
D83493-1|BAA18955.1| 38|Homo sapiens MnSOD precursor protein. 35 0.36
U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subu... 31 4.5
BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein. 31 4.5
AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein. 31 4.5
AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor (T... 31 4.5
BC150246-1|AAI50247.1| 1563|Homo sapiens WDFY3 protein protein. 30 7.8
BC148294-1|AAI48295.1| 281|Homo sapiens WD repeat and FYVE doma... 30 7.8
BC119633-1|AAI19634.1| 281|Homo sapiens WD repeat and FYVE doma... 30 7.8
BC065502-1|AAH65502.1| 778|Homo sapiens WDFY3 protein protein. 30 7.8
BC015214-1|AAH15214.2| 437|Homo sapiens WDFY3 protein protein. 30 7.8
BC013377-1|AAH13377.1| 281|Homo sapiens WD repeat and FYVE doma... 30 7.8
AK055806-1|BAB71020.1| 722|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein. 30 7.8
AF411979-1|AAL04163.1| 420|Homo sapiens WD40- and FYVE-domain c... 30 7.8
AB023210-1|BAA76837.2| 1556|Homo sapiens KIAA0993 protein protein. 30 7.8
>Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for Mn
superoxide dismutase (EC 1.15.1.1.). ).
Length = 222
Score = 283 bits (693), Expect = 6e-76
Identities = 127/196 (64%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NKQ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKQRGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 202 KAIWNVINWENVTERY 217
>BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 282 bits (691), Expect = 1e-75
Identities = 128/209 (61%), Positives = 160/209 (76%), Gaps = 2/209 (0%)
Frame = -3
Query: 733 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 554
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 553 LAQAQAK-DTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSW 380
+A AK D + L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 379 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 200
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 199 YYLQYKNVRADYVKAIFDVANWNDISQRY 113
YYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 189 YYLQYKNVRPDYLKAIWNVINWENVTERY 217
>BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 282 bits (691), Expect = 1e-75
Identities = 128/209 (61%), Positives = 160/209 (76%), Gaps = 2/209 (0%)
Frame = -3
Query: 733 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 554
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 553 LAQAQAK-DTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSW 380
+A AK D + L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 379 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 200
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 199 YYLQYKNVRADYVKAIFDVANWNDISQRY 113
YYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 189 YYLQYKNVRPDYLKAIWNVINWENVTERY 217
>AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 282 bits (691), Expect = 1e-75
Identities = 128/209 (61%), Positives = 160/209 (76%), Gaps = 2/209 (0%)
Frame = -3
Query: 733 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 554
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 553 LAQAQAK-DTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSW 380
+A AK D + L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 379 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 200
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 199 YYLQYKNVRADYVKAIFDVANWNDISQRY 113
YYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 189 YYLQYKNVRPDYLKAIWNVINWENVTERY 217
>AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 282 bits (691), Expect = 1e-75
Identities = 128/209 (61%), Positives = 160/209 (76%), Gaps = 2/209 (0%)
Frame = -3
Query: 733 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 554
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 553 LAQAQAK-DTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSW 380
+A AK D + L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 379 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 200
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 199 YYLQYKNVRADYVKAIFDVANWNDISQRY 113
YYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 189 YYLQYKNVRPDYLKAIWNVINWENVTERY 217
>AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 281 bits (690), Expect = 1e-75
Identities = 126/196 (64%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 18 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 77
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 78 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 137
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 138 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 197
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 198 KAIWNVINWENVTERY 213
>X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide
dismutase (MnSOD) protein.
Length = 222
Score = 281 bits (688), Expect = 3e-75
Identities = 126/196 (64%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVNEEKYQEALAKGDVTAQ 81
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 202 KAIWNVINWENVTERY 217
>X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for
manganese containing superoxide dismutase (EC
1.15.1.1). ).
Length = 222
Score = 281 bits (688), Expect = 3e-75
Identities = 126/196 (64%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVNEEKYQEALAKGDVTAQ 81
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 202 KAIWNVINWENVTERY 217
>Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for
manganese-containing superoxide dismutase. ).
Length = 222
Score = 280 bits (687), Expect = 3e-75
Identities = 126/196 (64%), Positives = 152/196 (77%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 82 TALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 202 KAIWNVINWENVTERY 217
>X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide
dismutase protein.
Length = 222
Score = 280 bits (687), Expect = 3e-75
Identities = 126/196 (64%), Positives = 152/196 (77%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 82 TALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 202 KAIWNVINWENVTERY 217
>M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human
manganese-containing superoxide dismutase mRNA, complete
cds. ).
Length = 222
Score = 280 bits (687), Expect = 3e-75
Identities = 126/196 (64%), Positives = 152/196 (77%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 82 TALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 202 KAIWNVINWENVTERY 217
>X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for
manganese superoxide dismutase (EC 1.15.1.1). ).
Length = 222
Score = 280 bits (686), Expect = 4e-75
Identities = 126/196 (64%), Positives = 152/196 (77%), Gaps = 2/196 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A++ DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKLDFGSFDKFKEKLTAASVG 141
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 160 KAIFDVANWNDISQRY 113
KAI++V NW ++++RY
Sbjct: 202 KAIWNVINWENVTERY 217
>AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 210
Score = 276 bits (676), Expect = 7e-74
Identities = 124/193 (64%), Positives = 150/193 (77%), Gaps = 2/193 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 18 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 77
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 78 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 137
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 138 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 197
Query: 160 KAIFDVANWNDIS 122
KAI++V NW +++
Sbjct: 198 KAIWNVINWENVT 210
>AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 276 bits (676), Expect = 7e-74
Identities = 124/193 (64%), Positives = 150/193 (77%), Gaps = 2/193 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 21 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 80
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 81 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 140
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 141 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 200
Query: 160 KAIFDVANWNDIS 122
KAI++V NW +++
Sbjct: 201 KAIWNVINWENVT 213
>DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 212
Score = 275 bits (675), Expect = 1e-73
Identities = 124/192 (64%), Positives = 149/192 (77%), Gaps = 2/192 (1%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK-DTNTI 518
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK D
Sbjct: 21 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 80
Query: 517 LNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSWDNLKNQLSTASVA 341
+ L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+D K +L+ ASV
Sbjct: 81 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 140
Query: 340 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 161
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 141 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 200
Query: 160 KAIFDVANWNDI 125
KAI++V NW ++
Sbjct: 201 KAIWNVINWENV 212
>AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 209
Score = 274 bits (673), Expect = 2e-73
Identities = 126/205 (61%), Positives = 155/205 (75%), Gaps = 2/205 (0%)
Frame = -3
Query: 733 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 554
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 6 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 64
Query: 553 LAQAQAK-DTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKT-VPSCPFSQAVEKDFGSW 380
+A AK D L A+KFNGGGHINHSIFW NL+P P +A+++DFGS+
Sbjct: 65 YQEALAKGDVTAQTALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 124
Query: 379 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 200
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 125 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 184
Query: 199 YYLQYKNVRADYVKAIFDVANWNDI 125
YYLQYKNVR DY+KAI++V NW ++
Sbjct: 185 YYLQYKNVRPDYLKAIWNVINWENV 209
>AL135914-2|CAI21846.1| 161|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 161
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/67 (59%), Positives = 52/67 (77%)
Frame = -3
Query: 733 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 554
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 31 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 89
Query: 553 LAQAQAK 533
+A AK
Sbjct: 90 YQEALAK 96
>L34157-1|AAA83933.1| 75|Homo sapiens manganese superoxide
dismutase protein.
Length = 75
Score = 89.0 bits (211), Expect = 2e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 533
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAK 75
>BC016934-1|AAH16934.1| 140|Homo sapiens SOD2 protein protein.
Length = 140
Score = 89.0 bits (211), Expect = 2e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 533
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAK 75
>D83493-1|BAA18955.1| 38|Homo sapiens MnSOD precursor protein.
Length = 38
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3
Query: 694 SRQKHTLPELPYEYNAL 644
SRQKH+LP+LPY+Y AL
Sbjct: 22 SRQKHSLPDLPYDYGAL 38
>U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subunit
protein.
Length = 2109
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 358 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 257
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1799 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1832
>BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein.
Length = 978
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 358 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 257
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 693 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 726
>AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein.
Length = 279
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 358 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 257
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 100 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 133
>AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor
(TFIIIC) alpha chain, partial protein.
Length = 1857
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 358 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 257
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1547 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1580
>BC150246-1|AAI50247.1| 1563|Homo sapiens WDFY3 protein protein.
Length = 1563
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 1475 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 1531
>BC148294-1|AAI48295.1| 281|Homo sapiens WD repeat and FYVE domain
containing 3 protein.
Length = 281
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 193 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 249
>BC119633-1|AAI19634.1| 281|Homo sapiens WD repeat and FYVE domain
containing 3 protein.
Length = 281
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 193 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 249
>BC065502-1|AAH65502.1| 778|Homo sapiens WDFY3 protein protein.
Length = 778
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 690 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 746
>BC015214-1|AAH15214.2| 437|Homo sapiens WDFY3 protein protein.
Length = 437
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 349 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 405
>BC013377-1|AAH13377.1| 281|Homo sapiens WD repeat and FYVE domain
containing 3 protein.
Length = 281
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 193 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 249
>AK055806-1|BAB71020.1| 722|Homo sapiens protein ( Homo sapiens
cDNA FLJ31244 fis, clone KIDNE2005042, moderately
similar to LYSOSOMAL TRAFFICKING REGULATOR. ).
Length = 722
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 634 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 690
>AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein.
Length = 3526
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 3438 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 3494
>AF411979-1|AAL04163.1| 420|Homo sapiens WD40- and FYVE-domain
containing protein 3 protein.
Length = 420
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 332 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 388
>AB023210-1|BAA76837.2| 1556|Homo sapiens KIAA0993 protein protein.
Length = 1556
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 281 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 114
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 1468 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 1524
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,534,576
Number of Sequences: 237096
Number of extensions: 2483988
Number of successful extensions: 5378
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5346
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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