Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14m24
         (788 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051784-1|AAK93208.1|  418|Drosophila melanogaster LD30467p pro...    31   1.8  
AE014297-803|AAF54280.1|  418|Drosophila melanogaster CG9797-PA ...    31   1.8  
BT014642-1|AAT27266.1|  669|Drosophila melanogaster RE68722p pro...    29   7.2  
AY058414-1|AAL13643.1|  497|Drosophila melanogaster GH19049p pro...    29   7.2  
AJ242993-1|CAB44702.1|  710|Drosophila melanogaster putative sec...    29   7.2  
AJ242992-1|CAB44701.1|  710|Drosophila melanogaster putative sec...    29   7.2  
AE014297-3465|AAF56241.1|  710|Drosophila melanogaster CG6159-PA...    29   7.2  

>AY051784-1|AAK93208.1|  418|Drosophila melanogaster LD30467p
           protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 684 KKCHVPSEPKRVSESARKRGTIG 752
           KKC +P +PK  S+ AR+RGT G
Sbjct: 227 KKCSLPPKPKVRSDDARRRGTGG 249


>AE014297-803|AAF54280.1|  418|Drosophila melanogaster CG9797-PA
           protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 684 KKCHVPSEPKRVSESARKRGTIG 752
           KKC +P +PK  S+ AR+RGT G
Sbjct: 227 KKCSLPPKPKVRSDDARRRGTGG 249


>BT014642-1|AAT27266.1|  669|Drosophila melanogaster RE68722p
           protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 258 ELHHYFVSKLNAKQFWLQWLVCMYILYSSTHKLS 359
           +LH Y ++KL  K+   ++L  +Y LYS T KLS
Sbjct: 285 KLHQYAMTKLEDKKDEEKYLRTLYELYSRTLKLS 318


>AY058414-1|AAL13643.1|  497|Drosophila melanogaster GH19049p
           protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 258 ELHHYFVSKLNAKQFWLQWLVCMYILYSSTHKLS 359
           +LH Y ++KL  K+   ++L  +Y LYS T KLS
Sbjct: 72  KLHQYAMTKLEDKKDEEKYLRTLYELYSRTLKLS 105


>AJ242993-1|CAB44702.1|  710|Drosophila melanogaster putative sec10
           protein protein.
          Length = 710

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 258 ELHHYFVSKLNAKQFWLQWLVCMYILYSSTHKLS 359
           +LH Y ++KL  K+   ++L  +Y LYS T KLS
Sbjct: 285 KLHQYAMTKLEDKKDEEKYLRTLYELYSRTLKLS 318


>AJ242992-1|CAB44701.1|  710|Drosophila melanogaster putative sec10
           protein protein.
          Length = 710

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 258 ELHHYFVSKLNAKQFWLQWLVCMYILYSSTHKLS 359
           +LH Y ++KL  K+   ++L  +Y LYS T KLS
Sbjct: 285 KLHQYAMTKLEDKKDEEKYLRTLYELYSRTLKLS 318


>AE014297-3465|AAF56241.1|  710|Drosophila melanogaster CG6159-PA
           protein.
          Length = 710

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 258 ELHHYFVSKLNAKQFWLQWLVCMYILYSSTHKLS 359
           +LH Y ++KL  K+   ++L  +Y LYS T KLS
Sbjct: 285 KLHQYAMTKLEDKKDEEKYLRTLYELYSRTLKLS 318


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,651,191
Number of Sequences: 53049
Number of extensions: 586745
Number of successful extensions: 1075
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)