Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14m17
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064511-1|AAH64511.1| 314|Homo sapiens fumarylacetoacetate hyd... 109 9e-24
AC018892-1|AAY14641.1| 314|Homo sapiens unknown protein. 109 9e-24
BC110911-1|AAI10912.1| 314|Homo sapiens fumarylacetoacetate hyd... 107 3e-23
BC009403-1|AAH09403.1| 314|Homo sapiens fumarylacetoacetate hyd... 107 3e-23
AF151863-1|AAD34100.1| 314|Homo sapiens CGI-105 protein protein. 107 3e-23
AC009238-1|AAY14753.1| 314|Homo sapiens unknown protein. 107 3e-23
BC063017-1|AAH63017.1| 226|Homo sapiens FAHD1 protein protein. 60 7e-09
AL031722-3|CAM26476.1| 226|Homo sapiens fumarylacetoacetate hyd... 60 7e-09
AL031722-2|CAM26475.1| 248|Homo sapiens fumarylacetoacetate hyd... 60 7e-09
AK094199-1|BAC04308.1| 224|Homo sapiens protein ( Homo sapiens ... 60 7e-09
AE006639-9|AAK61295.1| 221|Homo sapiens similar to homoprotocat... 60 7e-09
CR533499-1|CAG38530.1| 224|Homo sapiens DKFZP566J2046 protein. 58 3e-08
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 33 1.3
>BC064511-1|AAH64511.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2B protein.
Length = 314
Score = 109 bits (262), Expect = 9e-24
Identities = 48/100 (48%), Positives = 69/100 (69%)
Frame = -3
Query: 698 GKSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVM 519
GK+ DTFCPLGP ++T D V L++ C +NG + QSS+T Q+V L+ +S +
Sbjct: 208 GKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQFV 267
Query: 518 TLVPGDLILTGTPGGVGMYRQPPEYLQPGDVLTSEIEKIG 399
T PGD+ILTGTP GVG++R+PP +L+ GD + EIE++G
Sbjct: 268 TFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELG 307
>AC018892-1|AAY14641.1| 314|Homo sapiens unknown protein.
Length = 314
Score = 109 bits (262), Expect = 9e-24
Identities = 48/100 (48%), Positives = 69/100 (69%)
Frame = -3
Query: 698 GKSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVM 519
GK+ DTFCPLGP ++T D V L++ C +NG + QSS+T Q+V L+ +S +
Sbjct: 208 GKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQFV 267
Query: 518 TLVPGDLILTGTPGGVGMYRQPPEYLQPGDVLTSEIEKIG 399
T PGD+ILTGTP GVG++R+PP +L+ GD + EIE++G
Sbjct: 268 TFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELG 307
>BC110911-1|AAI10912.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2A protein.
Length = 314
Score = 107 bits (258), Expect = 3e-23
Identities = 47/100 (47%), Positives = 68/100 (68%)
Frame = -3
Query: 698 GKSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVM 519
GK+ DTFCPLGP ++T D V L++ C +NG + QS +T Q+V L+ +S +
Sbjct: 208 GKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFV 267
Query: 518 TLVPGDLILTGTPGGVGMYRQPPEYLQPGDVLTSEIEKIG 399
T PGD+ILTGTP GVG++R+PP +L+ GD + EIE++G
Sbjct: 268 TFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELG 307
>BC009403-1|AAH09403.1| 314|Homo sapiens fumarylacetoacetate
hydrolase domain containing 2A protein.
Length = 314
Score = 107 bits (258), Expect = 3e-23
Identities = 47/100 (47%), Positives = 68/100 (68%)
Frame = -3
Query: 698 GKSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVM 519
GK+ DTFCPLGP ++T D V L++ C +NG + QS +T Q+V L+ +S +
Sbjct: 208 GKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFV 267
Query: 518 TLVPGDLILTGTPGGVGMYRQPPEYLQPGDVLTSEIEKIG 399
T PGD+ILTGTP GVG++R+PP +L+ GD + EIE++G
Sbjct: 268 TFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELG 307
>AF151863-1|AAD34100.1| 314|Homo sapiens CGI-105 protein protein.
Length = 314
Score = 107 bits (258), Expect = 3e-23
Identities = 47/100 (47%), Positives = 68/100 (68%)
Frame = -3
Query: 698 GKSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVM 519
GK+ DTFCPLGP ++T D V L++ C +NG + QS +T Q+V L+ +S +
Sbjct: 208 GKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFV 267
Query: 518 TLVPGDLILTGTPGGVGMYRQPPEYLQPGDVLTSEIEKIG 399
T PGD+ILTGTP GVG++R+PP +L+ GD + EIE++G
Sbjct: 268 TFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELG 307
>AC009238-1|AAY14753.1| 314|Homo sapiens unknown protein.
Length = 314
Score = 107 bits (258), Expect = 3e-23
Identities = 47/100 (47%), Positives = 68/100 (68%)
Frame = -3
Query: 698 GKSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVM 519
GK+ DTFCPLGP ++T D V L++ C +NG + QS +T Q+V L+ +S +
Sbjct: 208 GKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFV 267
Query: 518 TLVPGDLILTGTPGGVGMYRQPPEYLQPGDVLTSEIEKIG 399
T PGD+ILTGTP GVG++R+PP +L+ GD + EIE++G
Sbjct: 268 TFYPGDVILTGTPPGVGVFRKPPVFLKKGDEVQCEIEELG 307
>BC063017-1|AAH63017.1| 226|Homo sapiens FAHD1 protein protein.
Length = 226
Score = 60.1 bits (139), Expect = 7e-09
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -3
Query: 695 KSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVMT 516
KS CP+ V +++ +L++ +NG L+Q T+ ++ SIP ++ +S ++T
Sbjct: 123 KSFTASCPVSAFV-PKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIIT 181
Query: 515 LVPGDLILTGTPGGVGMYRQPPE 447
L GD+ILTGTP GVG ++ E
Sbjct: 182 LEEGDIILTGTPKGVGPVKENDE 204
>AL031722-3|CAM26476.1| 226|Homo sapiens fumarylacetoacetate
hydrolase domain containing 1 protein.
Length = 226
Score = 60.1 bits (139), Expect = 7e-09
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -3
Query: 695 KSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVMT 516
KS CP+ V +++ +L++ +NG L+Q T+ ++ SIP ++ +S ++T
Sbjct: 123 KSFTASCPVSAFV-PKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIIT 181
Query: 515 LVPGDLILTGTPGGVGMYRQPPE 447
L GD+ILTGTP GVG ++ E
Sbjct: 182 LEEGDIILTGTPKGVGPVKENDE 204
>AL031722-2|CAM26475.1| 248|Homo sapiens fumarylacetoacetate
hydrolase domain containing 1 protein.
Length = 248
Score = 60.1 bits (139), Expect = 7e-09
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -3
Query: 695 KSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVMT 516
KS CP+ V +++ +L++ +NG L+Q T+ ++ SIP ++ +S ++T
Sbjct: 123 KSFTASCPVSAFV-PKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIIT 181
Query: 515 LVPGDLILTGTPGGVGMYRQPPE 447
L GD+ILTGTP GVG ++ E
Sbjct: 182 LEEGDIILTGTPKGVGPVKENDE 204
>AK094199-1|BAC04308.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ36880 fis, clone BGGI12000616, weakly similar to
Isomerase-like protein. ).
Length = 224
Score = 60.1 bits (139), Expect = 7e-09
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -3
Query: 695 KSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVMT 516
KS CP+ V +++ +L++ +NG L+Q T+ ++ SIP ++ +S ++T
Sbjct: 123 KSFTASCPVSAFV-PKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIIT 181
Query: 515 LVPGDLILTGTPGGVGMYRQPPE 447
L GD+ILTGTP GVG ++ E
Sbjct: 182 LEEGDIILTGTPKGVGPVKENDE 204
>AE006639-9|AAK61295.1| 221|Homo sapiens similar to
homoprotocatechuate catabolism bifunctional
isomerase/decarboxylase protein.
Length = 221
Score = 60.1 bits (139), Expect = 7e-09
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -3
Query: 695 KSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVMT 516
KS CP+ V +++ +L++ +NG L+Q T+ ++ SIP ++ +S ++T
Sbjct: 120 KSFTASCPVSAFV-PKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIIT 178
Query: 515 LVPGDLILTGTPGGVGMYRQPPE 447
L GD+ILTGTP GVG ++ E
Sbjct: 179 LEEGDIILTGTPKGVGPVKENDE 201
>CR533499-1|CAG38530.1| 224|Homo sapiens DKFZP566J2046 protein.
Length = 224
Score = 58.0 bits (134), Expect = 3e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = -3
Query: 695 KSMDTFCPLGPCVLTSDEVGAAVELRVSCSLNGVLKQSSSTAQLVHSIPSLLHRISSVMT 516
KS CP+ V +++ +L++ +NG L+Q T+ ++ SIP ++ + ++T
Sbjct: 123 KSFTASCPVSAFV-PKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVPKIIT 181
Query: 515 LVPGDLILTGTPGGVGMYRQPPE 447
L GD+ILTGTP GVG ++ E
Sbjct: 182 LEEGDIILTGTPKGVGPVKENDE 204
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 32.7 bits (71), Expect = 1.3
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Frame = +1
Query: 355 GGWSR*NFSMRTSKAPIFSISLVSTSPGCRY--SGGCRYMPTPPGVPVRIRSPGTRVITE 528
G W+ + S ++ V T G R+ G C Y+ V P +++TE
Sbjct: 853 GRWACQQGTHCPSTCTLYGEGHVITFDGQRFVFDGNCEYILATDVCGVNYSQPTFKILTE 912
Query: 529 EILCSRLGMECT-SCAVLLLCLRTPLSEQDTRSSTAAPTSSLVSTHGPSGQNVSMDFP 699
++C G+ C+ + + L L L++++ + P L T G V + P
Sbjct: 913 NVICGNSGVTCSRAIKIFLGGLSVVLADRNYTVTGEEPHVQLGVTPGALSLVVDISIP 970
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,713,593
Number of Sequences: 237096
Number of extensions: 1987745
Number of successful extensions: 13218
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13218
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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