Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14m14
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015781-1|AAH15781.1|  519|Homo sapiens cAMP responsive element...    30   6.3  
BC014097-1|AAH14097.1|  519|Homo sapiens CREB3L1 protein protein.      30   6.3  
AB063321-1|BAC01278.1|  519|Homo sapiens OASIS protein.                30   6.3  

>BC015781-1|AAH15781.1|  519|Homo sapiens cAMP responsive element
           binding protein 3-like 1 protein.
          Length = 519

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = -1

Query: 333 ETMSRANKMLLSRVAVLQSTV------PY-ASSSQATTYLSKAAPRYISLCSCISPMLPR 175
           ET+  AN+ LL ++  LQ+ V      PY  +++Q  T L  AA  ++ +   + P LP 
Sbjct: 337 ETLENANRTLLQQLQKLQTLVTNKISRPYKMAATQTGTCLMVAALCFVLVLGSLVPCLPE 396

Query: 174 LRNRSDNCSQTP 139
             + S    + P
Sbjct: 397 FSSGSQTVKEDP 408


>BC014097-1|AAH14097.1|  519|Homo sapiens CREB3L1 protein protein.
          Length = 519

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = -1

Query: 333 ETMSRANKMLLSRVAVLQSTV------PY-ASSSQATTYLSKAAPRYISLCSCISPMLPR 175
           ET+  AN+ LL ++  LQ+ V      PY  +++Q  T L  AA  ++ +   + P LP 
Sbjct: 337 ETLENANRTLLQQLQKLQTLVTNKISRPYKMAATQTGTCLMVAALCFVLVLGSLVPCLPE 396

Query: 174 LRNRSDNCSQTP 139
             + S    + P
Sbjct: 397 FSSGSQTVKEDP 408


>AB063321-1|BAC01278.1|  519|Homo sapiens OASIS protein.
          Length = 519

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = -1

Query: 333 ETMSRANKMLLSRVAVLQSTV------PY-ASSSQATTYLSKAAPRYISLCSCISPMLPR 175
           ET+  AN+ LL ++  LQ+ V      PY  +++Q  T L  AA  ++ +   + P LP 
Sbjct: 337 ETLENANRTLLQQLQKLQTLVTNKISRPYKMAATQTGTCLMVAALCFVLVLGSLVPCLPE 396

Query: 174 LRNRSDNCSQTP 139
             + S    + P
Sbjct: 397 FSSGSQTVKEDP 408


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,240,735
Number of Sequences: 237096
Number of extensions: 1805541
Number of successful extensions: 4559
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4539
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)