Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14m03
(756 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein ( Dros... 32 0.97
X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein ( Dros... 32 0.97
X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein ( D.me... 32 0.97
AE014296-2992|AAN11689.1| 906|Drosophila melanogaster CG8127-PD... 32 0.97
AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA... 32 0.97
AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC... 32 0.97
AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB... 32 0.97
AE014134-1179|AAF52446.2| 746|Drosophila melanogaster CG31632-P... 31 1.7
BT022319-1|AAY54735.1| 221|Drosophila melanogaster IP08243p pro... 29 9.1
BT022251-1|AAY54667.1| 178|Drosophila melanogaster IP08143p pro... 29 9.1
AY061076-1|AAL28624.1| 529|Drosophila melanogaster LD05247p pro... 29 9.1
AE013599-2679|AAF57698.1| 222|Drosophila melanogaster CG17525-P... 29 9.1
AE013599-1456|AAM68671.1| 529|Drosophila melanogaster CG8839-PE... 29 9.1
AE013599-1455|AAM68670.1| 529|Drosophila melanogaster CG8839-PD... 29 9.1
AE013599-1454|AAM68669.1| 529|Drosophila melanogaster CG8839-PC... 29 9.1
AE013599-1453|AAM68668.1| 529|Drosophila melanogaster CG8839-PA... 29 9.1
>X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein (
Drosophila mRNA forecdysone-inducible gene E75B. ).
Length = 1394
Score = 31.9 bits (69), Expect = 0.97
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 436 VFLLCMSDCLGNSSICLRTYIKFSKMYWDGI-VRTLISLNFSLRDSLECM-L*IARIALF 609
V L+CM D NS ICL + +G R L+ F+ + + M L A I LF
Sbjct: 610 VRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLF 669
Query: 610 CRINIIS 630
C I +I+
Sbjct: 670 CAIVLIT 676
>X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein (
Drosophila mRNA forecdysone-inducible gene E75A. ).
Length = 1237
Score = 31.9 bits (69), Expect = 0.97
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 436 VFLLCMSDCLGNSSICLRTYIKFSKMYWDGI-VRTLISLNFSLRDSLECM-L*IARIALF 609
V L+CM D NS ICL + +G R L+ F+ + + M L A I LF
Sbjct: 453 VRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLF 512
Query: 610 CRINIIS 630
C I +I+
Sbjct: 513 CAIVLIT 519
>X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein (
D.melanogaster 75B mRNAencoding hypothetical 75B
protein. ).
Length = 1443
Score = 31.9 bits (69), Expect = 0.97
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 436 VFLLCMSDCLGNSSICLRTYIKFSKMYWDGI-VRTLISLNFSLRDSLECM-L*IARIALF 609
V L+CM D NS ICL + +G R L+ F+ + + M L A I LF
Sbjct: 660 VRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLF 719
Query: 610 CRINIIS 630
C I +I+
Sbjct: 720 CAIVLIT 726
>AE014296-2992|AAN11689.1| 906|Drosophila melanogaster CG8127-PD,
isoform D protein.
Length = 906
Score = 31.9 bits (69), Expect = 0.97
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 436 VFLLCMSDCLGNSSICLRTYIKFSKMYWDGI-VRTLISLNFSLRDSLECM-L*IARIALF 609
V L+CM D NS ICL + +G R L+ F+ + + M L A I LF
Sbjct: 160 VRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLF 219
Query: 610 CRINIIS 630
C I +I+
Sbjct: 220 CAIVLIT 226
>AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA,
isoform A protein.
Length = 1355
Score = 31.9 bits (69), Expect = 0.97
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 436 VFLLCMSDCLGNSSICLRTYIKFSKMYWDGI-VRTLISLNFSLRDSLECM-L*IARIALF 609
V L+CM D NS ICL + +G R L+ F+ + + M L A I LF
Sbjct: 609 VRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLF 668
Query: 610 CRINIIS 630
C I +I+
Sbjct: 669 CAIVLIT 675
>AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC,
isoform C protein.
Length = 1199
Score = 31.9 bits (69), Expect = 0.97
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 436 VFLLCMSDCLGNSSICLRTYIKFSKMYWDGI-VRTLISLNFSLRDSLECM-L*IARIALF 609
V L+CM D NS ICL + +G R L+ F+ + + M L A I LF
Sbjct: 453 VRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLF 512
Query: 610 CRINIIS 630
C I +I+
Sbjct: 513 CAIVLIT 519
>AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB,
isoform B protein.
Length = 1412
Score = 31.9 bits (69), Expect = 0.97
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 436 VFLLCMSDCLGNSSICLRTYIKFSKMYWDGI-VRTLISLNFSLRDSLECM-L*IARIALF 609
V L+CM D NS ICL + +G R L+ F+ + + M L A I LF
Sbjct: 666 VRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLF 725
Query: 610 CRINIIS 630
C I +I+
Sbjct: 726 CAIVLIT 732
>AE014134-1179|AAF52446.2| 746|Drosophila melanogaster CG31632-PA
protein.
Length = 746
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -2
Query: 449 HNRNTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPH--DVQNLHIHRFKKTIKEHLCN 276
H+ + + H + LH+ + + C+ PH +V + H KK LCN
Sbjct: 483 HSPHLHHFHHMAAKWPGLHQFSDLYSCMKCEKMFSTPHGLEVHSRRTHHGKKPYACELCN 542
Query: 275 KAY 267
K +
Sbjct: 543 KTF 545
>BT022319-1|AAY54735.1| 221|Drosophila melanogaster IP08243p
protein.
Length = 221
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -2
Query: 593 AIYNMHSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKQSDIH 447
++Y + + R +K L +P +++F NL E+F K++ H
Sbjct: 4 SLYGLDASPPTRACLLTLKALDLPFEFVFVNLFEKENFSEDFSKKNPQH 52
>BT022251-1|AAY54667.1| 178|Drosophila melanogaster IP08143p
protein.
Length = 178
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -2
Query: 593 AIYNMHSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKQSDIH 447
++Y + + R +K L +P +++F NL E+F K++ H
Sbjct: 1 SLYGLDASPPTRACLLTLKALDLPFEFVFVNLFEKENFSEDFSKKNPQH 49
>AY061076-1|AAL28624.1| 529|Drosophila melanogaster LD05247p
protein.
Length = 529
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 463 LGNSSICLRTYIKFSKMYWDGIVRTLISLNFSLRDSLEC 579
LGN + + TY++ K ++ T I L+ ++ DS +C
Sbjct: 375 LGNLNHDINTYLELFKWFFGASKHTFIGLSTAIMDSAQC 413
>AE013599-2679|AAF57698.1| 222|Drosophila melanogaster CG17525-PA
protein.
Length = 222
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -2
Query: 593 AIYNMHSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKQSDIH 447
++Y + + R +K L +P +++F NL E+F K++ H
Sbjct: 5 SLYGLDASPPTRACLLTLKALDLPFEFVFVNLFEKENFSEDFSKKNPQH 53
>AE013599-1456|AAM68671.1| 529|Drosophila melanogaster CG8839-PE,
isoform E protein.
Length = 529
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 463 LGNSSICLRTYIKFSKMYWDGIVRTLISLNFSLRDSLEC 579
LGN + + TY++ K ++ T I L+ ++ DS +C
Sbjct: 375 LGNLNHDINTYLELFKWFFGASKHTFIGLSTAIMDSAQC 413
>AE013599-1455|AAM68670.1| 529|Drosophila melanogaster CG8839-PD,
isoform D protein.
Length = 529
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 463 LGNSSICLRTYIKFSKMYWDGIVRTLISLNFSLRDSLEC 579
LGN + + TY++ K ++ T I L+ ++ DS +C
Sbjct: 375 LGNLNHDINTYLELFKWFFGASKHTFIGLSTAIMDSAQC 413
>AE013599-1454|AAM68669.1| 529|Drosophila melanogaster CG8839-PC,
isoform C protein.
Length = 529
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 463 LGNSSICLRTYIKFSKMYWDGIVRTLISLNFSLRDSLEC 579
LGN + + TY++ K ++ T I L+ ++ DS +C
Sbjct: 375 LGNLNHDINTYLELFKWFFGASKHTFIGLSTAIMDSAQC 413
>AE013599-1453|AAM68668.1| 529|Drosophila melanogaster CG8839-PA,
isoform A protein.
Length = 529
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 463 LGNSSICLRTYIKFSKMYWDGIVRTLISLNFSLRDSLEC 579
LGN + + TY++ K ++ T I L+ ++ DS +C
Sbjct: 375 LGNLNHDINTYLELFKWFFGASKHTFIGLSTAIMDSAQC 413
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,071,784
Number of Sequences: 53049
Number of extensions: 606099
Number of successful extensions: 1612
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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