Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14m02
         (745 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131078-1|BAC85128.1| 1386|Homo sapiens FLJ00274 protein protein.     31   5.8  
CR457340-1|CAG33621.1|  350|Homo sapiens DKFZP566H073 protein.         30   7.6  
BC010139-1|AAH10139.1|  350|Homo sapiens ring finger protein 167...    30   7.6  
AL834284-1|CAD38958.1|  349|Homo sapiens hypothetical protein pr...    30   7.6  
AL079315-1|CAB45281.1|  158|Homo sapiens hypothetical protein pr...    30   7.6  
AL050060-1|CAB43253.1|  324|Homo sapiens hypothetical protein pr...    30   7.6  
AK025329-1|BAB15113.1|  350|Homo sapiens protein ( Homo sapiens ...    30   7.6  

>AK131078-1|BAC85128.1| 1386|Homo sapiens FLJ00274 protein protein.
          Length = 1386

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -2

Query: 738 DQDQKEEPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATE 586
           DQ+  + P +G  +D+EG    DPA        D P  +++   AE  + E
Sbjct: 127 DQEPPDTPGEGEEDDEEGCASTDPAGADEGSGPDRPT-EDMGQDAEDTSEE 176


>CR457340-1|CAG33621.1|  350|Homo sapiens DKFZP566H073 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -2

Query: 738 DQDQKEEPTQGPYEDDEGMVGDDPAAYLT 652
           D+DQ+EE TQG  E DEG   D PA+  T
Sbjct: 281 DEDQEEE-TQGQEEGDEGEPRDHPASERT 308


>BC010139-1|AAH10139.1|  350|Homo sapiens ring finger protein 167
           protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -2

Query: 738 DQDQKEEPTQGPYEDDEGMVGDDPAAYLT 652
           D+DQ+EE TQG  E DEG   D PA+  T
Sbjct: 281 DEDQEEE-TQGQEEGDEGEPRDHPASERT 308


>AL834284-1|CAD38958.1|  349|Homo sapiens hypothetical protein
           protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -2

Query: 738 DQDQKEEPTQGPYEDDEGMVGDDPAAYLT 652
           D+DQ+EE TQG  E DEG   D PA+  T
Sbjct: 280 DEDQEEE-TQGQEEGDEGEPRDHPASERT 307


>AL079315-1|CAB45281.1|  158|Homo sapiens hypothetical protein
           protein.
          Length = 158

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -2

Query: 738 DQDQKEEPTQGPYEDDEGMVGDDPAAYLT 652
           D+DQ+EE TQG  E DEG   D PA+  T
Sbjct: 89  DEDQEEE-TQGQEEGDEGEPRDHPASERT 116


>AL050060-1|CAB43253.1|  324|Homo sapiens hypothetical protein
           protein.
          Length = 324

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -2

Query: 738 DQDQKEEPTQGPYEDDEGMVGDDPAAYLT 652
           D+DQ+EE TQG  E DEG   D PA+  T
Sbjct: 255 DEDQEEE-TQGQEEGDEGEPRDHPASERT 282


>AK025329-1|BAB15113.1|  350|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21676 fis, clone COL09164. ).
          Length = 350

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -2

Query: 738 DQDQKEEPTQGPYEDDEGMVGDDPAAYLT 652
           D+DQ+EE TQG  E DEG   D PA+  T
Sbjct: 281 DEDQEEE-TQGQEEGDEGEPRDHPASERT 308


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,507,019
Number of Sequences: 237096
Number of extensions: 1501268
Number of successful extensions: 6525
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6525
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)