Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14l13
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 78 8e-15
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 75 5e-14
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 41 8e-04
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 37 0.013
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 37 0.018
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 37 0.018
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.67
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 30 1.5
AF125971-6|AAP86613.1| 176|Caenorhabditis elegans Hypothetical ... 30 2.0
AF077542-8|AAC26300.2| 342|Caenorhabditis elegans Serpentine re... 29 2.7
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 29 3.6
AF077542-4|AAU20829.1| 315|Caenorhabditis elegans Serpentine re... 29 3.6
Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical pr... 29 4.7
AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein. 29 4.7
AF000299-2|AAC47981.2| 324|Caenorhabditis elegans Serpentine re... 28 6.2
Z83123-12|CAI70411.1| 329|Caenorhabditis elegans Hypothetical p... 28 8.2
Z83123-11|CAB05610.3| 335|Caenorhabditis elegans Hypothetical p... 28 8.2
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 28 8.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 8.2
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 28 8.2
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 28 8.2
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 28 8.2
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 77.8 bits (183), Expect = 8e-15
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Frame = -1
Query: 682 PLE-MPVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXX 506
PL+ +P F V L F G +F+ EGV + IEN M EP
Sbjct: 222 PLDSLPAFGAVENLPLFFGTVMFAFEGVAVVLPIENQMNEPIHFITPNGVLNTSCILVLL 281
Query: 505 XXXXXGYWG---YGELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYY 335
G++G YG K +TLN P PF A+KV L I V++ L F+VP + V +
Sbjct: 282 VYMTVGFFGFLRYGNDIKDTLTLNLPQTPFYQAIKVMFVLCILVSYPLQFYVPMERVEKW 341
Query: 334 LKKRHQPQKYWLWERVYRIIFVTGITL---IAVTFPNISKLTALIGSFCLSSMGFMYPAF 164
+K++ K +Y I F G+ L +A P+++ +L+GS +S+ ++P
Sbjct: 342 IKRKVVEAKQ--EPMIYAIRF-GGVLLTCAMAQLIPHLALFISLVGSVAGTSLTLVFPPL 398
Query: 163 IELTLDWTDPGLGFLMW 113
IEL ++ L +W
Sbjct: 399 IELLCSYSKQELTKWVW 415
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 74.9 bits (176), Expect = 5e-14
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 3/190 (1%)
Frame = -1
Query: 673 MPVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXXXXXX 494
+P F L F G +F+ EGV M IEN M P
Sbjct: 236 LPWFGKATDLPLFFGTVMFAFEGVAVIMPIENRMQSPHAFISWNGVLNSSCLVVLAIFSV 295
Query: 493 XGYWGYGELS---KSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYLKKR 323
G++GY L K TLN P PF +K+ I +++ L F+VP + + ++ ++
Sbjct: 296 TGFYGYLSLGNDVKDTATLNLPMTPFYQTIKLMFVACIMISYPLQFYVPMERIEKWITRK 355
Query: 322 HQPQKYWLWERVYRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAFIELTLDW 143
K L+ + R V IA P+++ +LIG+F +SM ++P IEL +
Sbjct: 356 IPVDKQTLYIYIARYSGVILTCAIAELIPHLALFISLIGAFSGASMALLFPPCIELLTSY 415
Query: 142 TDPGLGFLMW 113
L +W
Sbjct: 416 AKNELSTGLW 425
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 56.8 bits (131), Expect = 2e-08
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 8/203 (3%)
Frame = -1
Query: 676 EMPVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXXXXX 497
++P G IG+ +++ EG + IEN + P
Sbjct: 226 KLPAATNFTGTITMIGMSMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMT 285
Query: 496 XXGYWGY---GELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYLKK 326
G++GY G+ +T N P E + VF+ L + ++ +V +D+ + ++
Sbjct: 286 ALGFFGYTGFGDSIAPTITTNVPKEGLYSTVNVFLMLQSLLGNSIAMYVVYDMFFNGFRR 345
Query: 325 RHQPQ----KYWLWERVYRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAFIE 158
+ + WL ++ +R+ +V L+AV P + + L+G + ++P F E
Sbjct: 346 KFGARFPNVPKWLSDKGFRVFWVLVTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFE 405
Query: 157 LTLDWTD-PGLGFLMWRMWKCII 92
+ WTD GL RM K I
Sbjct: 406 MITFWTDWKGLLTYRQRMTKIFI 428
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 48.4 bits (110), Expect = 5e-06
Identities = 42/212 (19%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Frame = -1
Query: 676 EMPVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXXXXX 497
++P + G+ G ++++EG + +EN M +P+ +
Sbjct: 208 DLPPVTDLMGIVSAAGTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYS 267
Query: 496 XXGYWG---YGELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYLKK 326
G++G YG + +TLN P + I +K + ++Y F + + ++W +KK
Sbjct: 268 FAGFFGFLTYGNDVQDSITLNLPNDHLGIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKK 327
Query: 325 RHQPQ--KYWLWERV----YRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAF 164
+ + +R+ +R V + L++ P +S + L+G + ++P+
Sbjct: 328 KLRTTCGVSTTTKRIVHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSL 387
Query: 163 IELT--LDWTDPGLGFL--MWRMWKCIIVALF 80
L L + +GFL ++ + CII+ +F
Sbjct: 388 FHLLIFLPQFECRIGFLFDIFLDFVCIILGMF 419
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 48.4 bits (110), Expect = 5e-06
Identities = 42/212 (19%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Frame = -1
Query: 676 EMPVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXXXXX 497
++P + G+ G ++++EG + +EN M +P+ +
Sbjct: 263 DLPPVTDLMGIVSAAGTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYS 322
Query: 496 XXGYWG---YGELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYLKK 326
G++G YG + +TLN P + I +K + ++Y F + + ++W +KK
Sbjct: 323 FAGFFGFLTYGNDVQDSITLNLPNDHLGIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKK 382
Query: 325 RHQPQ--KYWLWERV----YRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAF 164
+ + +R+ +R V + L++ P +S + L+G + ++P+
Sbjct: 383 KLRTTCGVSTTTKRIVHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSL 442
Query: 163 IELT--LDWTDPGLGFL--MWRMWKCIIVALF 80
L L + +GFL ++ + CII+ +F
Sbjct: 443 FHLLIFLPQFECRIGFLFDIFLDFVCIILGMF 474
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/173 (20%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Frame = -1
Query: 655 VPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXXXXXXXGYWGY 476
+ G+ G ++S EG + +EN++ PK +T G++GY
Sbjct: 259 IEGISLAAGALIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGY 318
Query: 475 ---GELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYLKKRHQPQKY 305
G + +TLN P +++K + L I+ A+ +V ++ L+ + +
Sbjct: 319 VTFGPAVQGSLTLNLPNSILTVSIKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKISEDRK 378
Query: 304 WLWERVYRIIFVTGITLI----AVTFPNISKLTALIGSFCLSSMGFMYPAFIE 158
+ R+ G+ LI A+ PN+ ++ L+G + + P+F++
Sbjct: 379 MV-HRLLPYALRLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLD 430
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 41.1 bits (92), Expect = 8e-04
Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 1/178 (0%)
Frame = -1
Query: 676 EMPVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXXXXX 497
++P F+T LF +G +FS+ G A I++ M +PK+ T
Sbjct: 238 KLPPFRTT-NLFLSMGTLLFSVGGHSAFPTIQHDMKQPKEFTRSVFLAFTIMAFMYIPVC 296
Query: 496 XXGYWGYGELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYLKKR-H 320
GY YG+ + + + + ++ + +MI V L + F+ + +++ H
Sbjct: 297 IMGYLVYGDSLRDSIIPSIQ----TVWIQQAINIMITVHCILTLTIVFNPLMQEVEELFH 352
Query: 319 QPQKYWLWERVYRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAFIELTLD 146
PQ++ + R + + +A + P L L+G L+ + P + L+
Sbjct: 353 VPQRFGPKRAIVRTGIMVAVVFVAESVPTFGPLLDLVGGSTLTLTSVIMPCLFYIYLN 410
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 37.1 bits (82), Expect = 0.013
Identities = 32/186 (17%), Positives = 74/186 (39%), Gaps = 6/186 (3%)
Frame = -1
Query: 697 HATVSPLEMPVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXX 518
H E+P V G+ G ++S EG + +EN++ P+ +
Sbjct: 217 HTWYPTWELPSITGVEGVSLAAGSLIYSFEGQAMVLPLENSLKHPQDMRGLTGVLSTAMN 276
Query: 517 XXXXXXXXXGYWGY---GELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDL 347
G++GY G + +TLN P + +K + L + + AL ++ +
Sbjct: 277 VVIVFYAFLGFFGYIAFGPDVRGSLTLNLPNSVLSVTVKGLLVLKVLLGNALQLFIIVQM 336
Query: 346 VWYYLKKRHQPQK---YWLWERVYRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFM 176
+ L+ + + + + R+ + +A+ PN++++ +G + +
Sbjct: 337 LLPSLQAKVSENRKLIHKILPYALRLSLMLVSLSLALAVPNLTEIIPFVGITSGLLISLI 396
Query: 175 YPAFIE 158
P+F++
Sbjct: 397 IPSFLD 402
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Frame = -1
Query: 478 YGELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYL---------KK 326
+GEL++ ++ + P + F I + + + + +++ L F+ L+ L
Sbjct: 323 FGELTQEEISNSLPNQSFKILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTS 382
Query: 325 RHQPQKYWL-WERVYRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAFIEL 155
+ P K W RII V +A++ P + +L L+G+ + + F++PA L
Sbjct: 383 CYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHL 440
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Frame = -1
Query: 478 YGELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYL---------KK 326
+GEL++ ++ + P + F I + + + + +++ L F+ L+ L
Sbjct: 323 FGELTQEEISNSLPNQSFKILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTS 382
Query: 325 RHQPQKYWL-WERVYRIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAFIEL 155
+ P K W RII V +A++ P + +L L+G+ + + F++PA L
Sbjct: 383 CYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHL 440
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +3
Query: 480 PQ*PKNPTAMTRTITTPIPPSNTAVTFFGSVIVFSIAIVAPTPSMLKTQTPMNSNRPGTV 659
P P PT M T TTP P+ T + S TP+ +K+ TP P T+
Sbjct: 260 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKS-TPTTPTTPTTM 318
Query: 660 LKT 668
T
Sbjct: 319 KST 321
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +3
Query: 480 PQ*PKNPTAMTRTITTPIPPSNTAVTFFGSVIVFSIAIVAPTPSMLKTQTPMNSNRPGTV 659
P P PT M T TTP P+ T ++ TP+ +K+ TP P T+
Sbjct: 361 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKS-TPTTPTTPTTM 419
Query: 660 LKT 668
T
Sbjct: 420 KST 422
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 480 PQ*PKNPTAMTRTITTPIPPS---NTAVTFFGSVIVFSIAIVAPTPSMLKTQTPMNSNRP 650
P P PT M T TTP P+ +T T + S TP+ +K+ TP P
Sbjct: 182 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS-TPTTPTTP 240
Query: 651 GTVLKT 668
T+ T
Sbjct: 241 TTMKST 246
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 480 PQ*PKNPTAMTRTITTPIPPS---NTAVTFFGSVIVFSIAIVAPTPSMLKTQTPMNSNRP 650
P P PT M T TTP P+ +T T + S TP+ +K+ TP P
Sbjct: 309 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS-TPTTPTTP 367
Query: 651 GTVLKT 668
T+ T
Sbjct: 368 TTMKST 373
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +3
Query: 489 PKNPTAMTRTITTPIPPSNTAVTFFGSVIVFSIAIVAPTPSMLKTQTPMNSNRPGTVLKT 668
P PT + T TTP +T T + S TP+ +K+ TP P T+ T
Sbjct: 162 PTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS-TPTTPTTPTTMKST 220
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 30.3 bits (65), Expect = 1.5
Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 1/175 (0%)
Frame = -1
Query: 670 PVFKTVPGLFEFIGVCVFSMEGVGATMAIENTMTEPKKVTXXXXXXXXXXXXXXXXXXXX 491
P F L F G +FS G A I++ M +P +
Sbjct: 196 PSFNFSKTLMSF-GTIMFSYGGHCAFPTIQHDMKKPHHFSRSIIIAFIIIFIFYLPVSMS 254
Query: 490 GYWGYGELSKSPVTLNFPWEPFPIALKVFMGLMIYVTFALNFWVPFDLVWYYLKKRHQPQ 311
GY+ YG + + I ++ + ++I + +L + F+ + ++
Sbjct: 255 GYFVYGSSLTDSIIPSIQ----NINIQTIVNILISLHVSLALTITFNPLNQEFEEILNMS 310
Query: 310 KYWLWERVY-RIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAFIELTL 149
+ W+R+ R + + + +A + PN L L+G ++ M + P L L
Sbjct: 311 HDFGWQRIVARALVMLSVVFVAESVPNFGVLLDLVGGSTITMMALVVPIVFNLAL 365
>AF125971-6|AAP86613.1| 176|Caenorhabditis elegans Hypothetical
protein Y4C6B.2b protein.
Length = 176
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 298 WERVY-RIIFVTGITLIAVTFPNISKLTALIGSFCLSSMGFMYPAFIELTL 149
W+R+ R + + + +A + PN L L+G ++ M + P L L
Sbjct: 7 WQRIVARALVMLSVVFVAESVPNFGVLLDLVGGSTITMMALVVPIVFNLAL 57
>AF077542-8|AAC26300.2| 342|Caenorhabditis elegans Serpentine
receptor, class z protein64 protein.
Length = 342
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 439 PWEPF-PIALKVFMGLMIYVTFALNFWVPFDLVWYYLKKRHQPQKYWLWERVYRIIF 272
P+ PF + +F+ +++Y+ +N L Y +++ PQ+Y W+ V IF
Sbjct: 203 PYVPFYSFHVLIFLSVLLYIPIMINIRKHSHLASY---QQNHPQRYIFWQTVVVFIF 256
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 501 TAMTRTITTPIPPSNTAVTFFGSVIVFSIAIVAPTPSMLKTQTPMNSNR 647
T T TITT PPS T+ T + + S A P+ T+ PM +++
Sbjct: 587 TVSTTTITTSTPPSTTSPTTTVTPVATSSATPKPS-KRTTTRRPMTASK 634
>AF077542-4|AAU20829.1| 315|Caenorhabditis elegans Serpentine
receptor, class z protein63 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 328 KRHQPQKYWLWERVYRIIFVTGITLIAVTFPNISKLTALI 209
+ H PQ+Y W+ + IF IT+++V F + +LI
Sbjct: 209 QEHHPQRYIFWQTIVVFIF-KSITILSVIFHAYYSIDSLI 247
>Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical
protein F26E4.6 protein.
Length = 84
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 385 VTF-ALNFWVPFDLVWYYLKKRHQ 317
VTF A+ FW PF +V Y L+K +Q
Sbjct: 61 VTFLAIGFWAPFIVVEYQLRKANQ 84
>Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical
protein T23G7.1 protein.
Length = 598
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +3
Query: 3 EIYLKTLAERALWHWYTCRQHRLPPPNNATMMHFHILHIKNPRPGSVQSNVSSMKAGYM 179
E+ L+ ++ + L +H+ P N T++H L I + +V+ +VSS K+ ++
Sbjct: 184 EMVLQIVSYKNLVERNRKNEHKNGRPENDTVLHLPFLIINTDKEANVECSVSSDKSEFL 242
>AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein.
Length = 598
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +3
Query: 3 EIYLKTLAERALWHWYTCRQHRLPPPNNATMMHFHILHIKNPRPGSVQSNVSSMKAGYM 179
E+ L+ ++ + L +H+ P N T++H L I + +V+ +VSS K+ ++
Sbjct: 184 EMVLQIVSYKNLVERNRKNEHKNGRPENDTVLHLPFLIINTDKEANVECSVSSDKSEFL 242
>AF000299-2|AAC47981.2| 324|Caenorhabditis elegans Serpentine
receptor, class z protein24, isoform b protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = -1
Query: 328 KRHQPQKYWLWERVYRIIFVTGITLIAVTF 239
++++ Q+Y +W+ V+ +IF T I ++ + F
Sbjct: 219 EKNKSQQYLIWQTVFILIFKTTILMLIIIF 248
>Z83123-12|CAI70411.1| 329|Caenorhabditis elegans Hypothetical
protein T04A11.7b protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 260 DSRYEYYSVDSFPQPILLGLVSLFQIIP 343
+S Y Y D F P+LL ++ IIP
Sbjct: 16 NSNYSNYQFDPFTIPVLLNIIPFIYIIP 43
>Z83123-11|CAB05610.3| 335|Caenorhabditis elegans Hypothetical
protein T04A11.7a protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 260 DSRYEYYSVDSFPQPILLGLVSLFQIIP 343
+S Y Y D F P+LL ++ IIP
Sbjct: 16 NSNYSNYQFDPFTIPVLLNIIPFIYIIP 43
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 537 PSNTAVTFFGSVIVFSIAIVAPTPSMLKTQTPMNSNRPGTV-LKTGISNGLTVA 695
P ++A + +GSV S V+P M+ Q P+++ + L T ++NG + A
Sbjct: 66 PGSSAHSPYGSVDESSRTAVSPAMDMVSNQAPIHTRQVSAPNLHTSVNNGQSSA 119
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 402 MNTFSAIGNGSQGKFSVTGDLDSSP*PQ*PKNPTAMTRTITTPIP-PSNT 548
+ T S G+ + G S T SSP P ++P T +TP P PS +
Sbjct: 1233 VTTGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQS 1282
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 309 FWGWCLFFR*YQTRSKGTQKLSAKVTYIINPM 404
FW W LF+R + ++ Q SAKVT NP+
Sbjct: 1164 FWKWSLFWR--REKADDKQSKSAKVTKKKNPV 1193
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 602 HPFHAEDTDPDELEQTWHRLEDGHLQRTD 688
H + +D P EL W+RLED + R +
Sbjct: 52 HNINMDDIVPFELSDRWYRLEDQSMTREE 80
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 602 HPFHAEDTDPDELEQTWHRLEDGHLQRTD 688
H + +D P EL W+RLED + R +
Sbjct: 226 HNINMDDIVPFELSDRWYRLEDQSMTREE 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,171
Number of Sequences: 27780
Number of extensions: 408459
Number of successful extensions: 1458
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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