Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14l09
(345 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113468-1|AAM29473.1| 366|Drosophila melanogaster RE41779p pro... 30 0.70
AY060921-1|AAL28469.1| 406|Drosophila melanogaster GM06493p pro... 30 0.70
AE014297-1268|AAF54614.1| 437|Drosophila melanogaster CG17726-P... 30 0.70
BT012337-1|AAS77462.1| 437|Drosophila melanogaster AT11512p pro... 30 0.93
AE013599-2611|AAF57754.1| 1205|Drosophila melanogaster CG5756-PA... 28 2.8
AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p pro... 27 5.0
AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB... 27 5.0
AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA... 27 5.0
AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p pro... 27 8.7
AF145692-1|AAD38667.1| 573|Drosophila melanogaster BcDNA.LD2989... 27 8.7
AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-P... 27 8.7
AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-P... 27 8.7
AE013599-1397|AAF58578.1| 573|Drosophila melanogaster CG8378-PA... 27 8.7
>AY113468-1|AAM29473.1| 366|Drosophila melanogaster RE41779p
protein.
Length = 366
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 26 QYVLHQLWLEPSLCACLTARRHVSVTRHLATSANNIRACGAI 151
Q+ LH +EP A LTA + RH+A + N+ CG +
Sbjct: 256 QHKLHDPLVEPG-SADLTADVDFKLVRHIAETRGNVHCCGPV 296
>AY060921-1|AAL28469.1| 406|Drosophila melanogaster GM06493p
protein.
Length = 406
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 26 QYVLHQLWLEPSLCACLTARRHVSVTRHLATSANNIRACGAI 151
Q+ LH +EP A LTA + RH+A + N+ CG +
Sbjct: 296 QHKLHDPLVEPG-SADLTADVDFKLVRHIAETRGNVHCCGPV 336
>AE014297-1268|AAF54614.1| 437|Drosophila melanogaster CG17726-PA
protein.
Length = 437
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 26 QYVLHQLWLEPSLCACLTARRHVSVTRHLATSANNIRACGAI 151
Q+ LH +EP A LTA + RH+A + N+ CG +
Sbjct: 327 QHKLHDPLVEPG-SADLTADVDFKLVRHIAETRGNVHCCGPV 367
>BT012337-1|AAS77462.1| 437|Drosophila melanogaster AT11512p
protein.
Length = 437
Score = 29.9 bits (64), Expect = 0.93
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 26 QYVLHQLWLEPSLCACLTARRHVSVTRHLATSANNIRACGAI 151
Q+ LH +EP A LTA + RH+A + N+ CG +
Sbjct: 327 QHELHDPLVEPGR-ADLTADVDFKLVRHIAETRGNVHCCGPV 367
>AE013599-2611|AAF57754.1| 1205|Drosophila melanogaster CG5756-PA,
isoform A protein.
Length = 1205
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 183 LENHFQESKT--KIAPHALMLLAD-VAKCLVTETCLRAVKQAQREGSNQS 43
+ H +S+T + P + L D + + +V E+ L+ K AQ +GSNQ+
Sbjct: 815 IAGHASQSQTTSSLTPASAFLSFDKLTRAIVDESVLQNFKSAQSQGSNQA 864
>AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p
protein.
Length = 223
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 146 AILVLLSWKWFSNSSFITSFLIVLFTL 226
AIL+ + WFS+ SFITSF+ V+ L
Sbjct: 51 AILIYMFCGWFSD-SFITSFVFVVLFL 76
>AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB,
isoform B protein.
Length = 215
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 146 AILVLLSWKWFSNSSFITSFLIVLFTL 226
AIL+ + WFS+ SFITSF+ V+ L
Sbjct: 48 AILIYMFCGWFSD-SFITSFVFVVLFL 73
>AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA,
isoform A protein.
Length = 218
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 146 AILVLLSWKWFSNSSFITSFLIVLFTL 226
AIL+ + WFS+ SFITSF+ V+ L
Sbjct: 51 AILIYMFCGWFSD-SFITSFVFVVLFL 76
>AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p
protein.
Length = 958
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 155 PRLPHMLLCCWQMWPNVWSP 96
P+ PH WQ W N W P
Sbjct: 724 PQRPHPFWPNWQSWVNSWRP 743
>AF145692-1|AAD38667.1| 573|Drosophila melanogaster BcDNA.LD29892
protein.
Length = 573
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 7 SWGKHFSICSTSTLVRTLSL-CLFDC 81
++G HF+ICS ++ LSL FDC
Sbjct: 461 NYGAHFAICSKEQRLKRLSLQYRFDC 486
>AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-PA
protein.
Length = 1040
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 155 PRLPHMLLCCWQMWPNVWSP 96
P+ PH WQ W N W P
Sbjct: 806 PQRPHPFWPNWQSWVNSWRP 825
>AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-PA
protein.
Length = 1373
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 156 TKIAPHALMLLADVAKCLVTETCLRAVKQAQRE 58
T+I+ + ADVA+ VT TC +V+Q Q +
Sbjct: 4 TRISGDMKIFAADVAESSVTATCNTSVQQQQSQ 36
>AE013599-1397|AAF58578.1| 573|Drosophila melanogaster CG8378-PA
protein.
Length = 573
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 7 SWGKHFSICSTSTLVRTLSL-CLFDC 81
++G HF+ICS ++ LSL FDC
Sbjct: 461 NYGAHFAICSKEQRLKRLSLQYRFDC 486
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,339,300
Number of Sequences: 53049
Number of extensions: 281775
Number of successful extensions: 731
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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