Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14l04
(771 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029274-1|ABK30911.1| 336|Drosophila melanogaster IP09655p pro... 94 2e-19
AY119152-1|AAM51012.1| 336|Drosophila melanogaster RE60471p pro... 94 2e-19
AE014297-2468|AAF55516.1| 336|Drosophila melanogaster CG7998-PA... 94 2e-19
AE014296-2223|AAF49862.1| 347|Drosophila melanogaster CG10749-P... 85 1e-16
AY089402-1|AAL90140.1| 347|Drosophila melanogaster AT22817p pro... 85 1e-16
AY075238-1|AAL68105.1| 349|Drosophila melanogaster AT19883p pro... 66 4e-11
AE014296-2222|AAF49863.1| 349|Drosophila melanogaster CG10748-P... 66 4e-11
AY118809-1|AAM50669.1| 404|Drosophila melanogaster GH21935p pro... 31 2.3
AF027300-1|AAB84112.1| 404|Drosophila melanogaster positive tra... 31 2.3
AE013599-3421|AAF46868.1| 404|Drosophila melanogaster CG5179-PA... 31 2.3
BT010251-1|AAQ23569.1| 512|Drosophila melanogaster RE38958p pro... 29 7.1
AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p pro... 29 7.1
AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-P... 29 7.1
AE013599-2472|AAF57860.2| 512|Drosophila melanogaster CG14478-P... 29 7.1
AE013599-2471|AAF57859.1| 512|Drosophila melanogaster CG14478-P... 29 7.1
DQ507278-1|ABG24573.1| 829|Drosophila melanogaster roadkill iso... 29 9.3
BT021321-1|AAX33469.1| 829|Drosophila melanogaster RE09049p pro... 29 9.3
AE014297-1781|AAF55008.2| 829|Drosophila melanogaster CG9924-PE... 29 9.3
>BT029274-1|ABK30911.1| 336|Drosophila melanogaster IP09655p
protein.
Length = 336
Score = 93.9 bits (223), Expect = 2e-19
Identities = 54/192 (28%), Positives = 102/192 (53%)
Frame = -2
Query: 767 IIVCTTPIDCMVPLIAETLKETGWYDPRKVLGSLAVPEMRASTLAARALCLEPRYTRVPI 588
+ + T P++ VP+ AE LK+ G YDP+++ G + +RA AL ++P+ ++P+
Sbjct: 137 VAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPV 196
Query: 587 VGGTEGESLVPLFSKAVEYFDFAKHNALMMTDAVRGAQTAVTRTDGACVRAADLSEAHAL 408
+GG G +++P+ S++ F + +T ++ A T V + A +A LS A+A
Sbjct: 197 IGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAK-AGAGSATLSMAYAG 255
Query: 407 SGLVTKVAHALLCHDIPRVTGFVETDASQVISPARYIANTVVIGGSGVVKNLGLPKMTDW 228
+ + L +V++ ++ A + + +V+G +GV +NLGLPK+ D+
Sbjct: 256 ARFAGSLLKGLNGEKNVIECSYVQS----TVTEATFFSTPLVLGKNGVQENLGLPKLNDY 311
Query: 227 ETTLVNFALIEL 192
E L+ A+ EL
Sbjct: 312 EKKLLEAAIPEL 323
>AY119152-1|AAM51012.1| 336|Drosophila melanogaster RE60471p
protein.
Length = 336
Score = 93.9 bits (223), Expect = 2e-19
Identities = 54/192 (28%), Positives = 102/192 (53%)
Frame = -2
Query: 767 IIVCTTPIDCMVPLIAETLKETGWYDPRKVLGSLAVPEMRASTLAARALCLEPRYTRVPI 588
+ + T P++ VP+ AE LK+ G YDP+++ G + +RA AL ++P+ ++P+
Sbjct: 137 VAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPV 196
Query: 587 VGGTEGESLVPLFSKAVEYFDFAKHNALMMTDAVRGAQTAVTRTDGACVRAADLSEAHAL 408
+GG G +++P+ S++ F + +T ++ A T V + A +A LS A+A
Sbjct: 197 IGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAK-AGAGSATLSMAYAG 255
Query: 407 SGLVTKVAHALLCHDIPRVTGFVETDASQVISPARYIANTVVIGGSGVVKNLGLPKMTDW 228
+ + L +V++ ++ A + + +V+G +GV +NLGLPK+ D+
Sbjct: 256 ARFAGSLLKGLNGEKNVIECSYVQS----TVTEATFFSTPLVLGKNGVQENLGLPKLNDY 311
Query: 227 ETTLVNFALIEL 192
E L+ A+ EL
Sbjct: 312 EKKLLEAAIPEL 323
>AE014297-2468|AAF55516.1| 336|Drosophila melanogaster CG7998-PA
protein.
Length = 336
Score = 93.9 bits (223), Expect = 2e-19
Identities = 54/192 (28%), Positives = 102/192 (53%)
Frame = -2
Query: 767 IIVCTTPIDCMVPLIAETLKETGWYDPRKVLGSLAVPEMRASTLAARALCLEPRYTRVPI 588
+ + T P++ VP+ AE LK+ G YDP+++ G + +RA AL ++P+ ++P+
Sbjct: 137 VAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPV 196
Query: 587 VGGTEGESLVPLFSKAVEYFDFAKHNALMMTDAVRGAQTAVTRTDGACVRAADLSEAHAL 408
+GG G +++P+ S++ F + +T ++ A T V + A +A LS A+A
Sbjct: 197 IGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAK-AGAGSATLSMAYAG 255
Query: 407 SGLVTKVAHALLCHDIPRVTGFVETDASQVISPARYIANTVVIGGSGVVKNLGLPKMTDW 228
+ + L +V++ ++ A + + +V+G +GV +NLGLPK+ D+
Sbjct: 256 ARFAGSLLKGLNGEKNVIECSYVQS----TVTEATFFSTPLVLGKNGVQENLGLPKLNDY 311
Query: 227 ETTLVNFALIEL 192
E L+ A+ EL
Sbjct: 312 EKKLLEAAIPEL 323
>AE014296-2223|AAF49862.1| 347|Drosophila melanogaster CG10749-PA
protein.
Length = 347
Score = 85.0 bits (201), Expect = 1e-16
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Frame = -2
Query: 755 TTPIDCMVPLIAETLKETGWYDPRKVLGSLAVPEMRASTLAARALCLEPRYTRVPIVGGT 576
T PI+ +VP++A LK G YDP ++ G + +RA T A L ++P+ +P++GG
Sbjct: 144 TNPINVIVPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKVNIPVIGGH 203
Query: 575 EGESLVPLFSKAVEYFDFAKHNALMMTDAVRGAQTAVTRT-DGACVRAADLSEAHALSGL 399
G +++P+ S+ F + ++ A T V DG + +A LS A A +
Sbjct: 204 TGRTILPILSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDG--LGSATLSMAFAATQF 261
Query: 398 VTKVAHALLCHDIPRVT--GFVETDASQVISPARYIANTVVIGGSGVVKNLGLPKMTDWE 225
V+ + + + +VE+D ++ A++ A +++G GV +N GLP + D E
Sbjct: 262 VSSLIKGIKGSKDECIVECAYVESD----VTEAQFFATPLILGPQGVKENTGLPDLDDEE 317
Query: 224 TTLVNFALIELLE 186
+N L L E
Sbjct: 318 RKALNGMLPILKE 330
>AY089402-1|AAL90140.1| 347|Drosophila melanogaster AT22817p
protein.
Length = 347
Score = 84.6 bits (200), Expect = 1e-16
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Frame = -2
Query: 755 TTPIDCMVPLIAETLKETGWYDPRKVLGSLAVPEMRASTLAARALCLEPRYTRVPIVGGT 576
T PI+ +VP++A LK G YDP ++ G + +RA T A L ++P+ +P++GG
Sbjct: 144 TNPINVIVPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQKVNIPVIGGH 203
Query: 575 EGESLVPLFSKAVEYFDFAKHNALMMTDAVRGAQTAVTRT-DGACVRAADLSEAHALSGL 399
G +++P+ S+ F + ++ A T V DG + +A LS A A +
Sbjct: 204 TGRTILPILSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDG--LGSATLSMAFAATQF 261
Query: 398 VTKVAHALLCHDIPRVT--GFVETDASQVISPARYIANTVVIGGSGVVKNLGLPKMTDWE 225
V + + + +VE+D ++ A++ A +++G GV +N GLP + D E
Sbjct: 262 VNSLIKGIKGSKDECIVECAYVESD----VTEAQFFATPLILGPQGVKENTGLPDLDDEE 317
Query: 224 TTLVNFALIELLE 186
+N L L E
Sbjct: 318 RKALNGMLPILKE 330
>AY075238-1|AAL68105.1| 349|Drosophila melanogaster AT19883p
protein.
Length = 349
Score = 66.5 bits (155), Expect = 4e-11
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Frame = -2
Query: 755 TTPIDCMVPLIAETLKETGWYDPRKVLGSLAVPEMRASTLAARALCLEPRYTRVPIVGGT 576
T P++ +VP AE L G +D R++ G + +R+ ++ + P +P++GG
Sbjct: 139 TNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGH 198
Query: 575 EGESLVPLFSKAVEYFDFAKHNALMMTDAVRGAQTAVTRTDGACVRAADLSEAHALSGLV 396
G +++PL S+ + +T ++ A T V A +A LS A+A + V
Sbjct: 199 AGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAK-AGKGSATLSMAYAGATFV 257
Query: 395 TKVAHALLCHDIPRVTGFVE-TDASQVISPARYIANTVVIGGSGVVKNLGLPKMTDWE 225
+ + D G +E + ++ A + A+ + +G G+ + + LP+M+D+E
Sbjct: 258 NSLLRGIAGQD-----GLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYE 310
>AE014296-2222|AAF49863.1| 349|Drosophila melanogaster CG10748-PA
protein.
Length = 349
Score = 66.5 bits (155), Expect = 4e-11
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Frame = -2
Query: 755 TTPIDCMVPLIAETLKETGWYDPRKVLGSLAVPEMRASTLAARALCLEPRYTRVPIVGGT 576
T P++ +VP AE L G +D R++ G + +R+ ++ + P +P++GG
Sbjct: 139 TNPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGH 198
Query: 575 EGESLVPLFSKAVEYFDFAKHNALMMTDAVRGAQTAVTRTDGACVRAADLSEAHALSGLV 396
G +++PL S+ + +T ++ A T V A +A LS A+A + V
Sbjct: 199 AGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAK-AGKGSATLSMAYAGATFV 257
Query: 395 TKVAHALLCHDIPRVTGFVE-TDASQVISPARYIANTVVIGGSGVVKNLGLPKMTDWE 225
+ + D G +E + ++ A + A+ + +G G+ + + LP+M+D+E
Sbjct: 258 NSLLRGIAGQD-----GLIECAFVASKLTDAPFFASPLELGKDGIKRYIPLPQMSDYE 310
>AY118809-1|AAM50669.1| 404|Drosophila melanogaster GH21935p
protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 200 IELLEKQKMVEDWHFKYCSSS 138
+ L+EKQK +ED+ F YC S
Sbjct: 27 MSLMEKQKYIEDYDFPYCDES 47
>AF027300-1|AAB84112.1| 404|Drosophila melanogaster positive
transcription elongationfactor b small subunit protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 200 IELLEKQKMVEDWHFKYCSSS 138
+ L+EKQK +ED+ F YC S
Sbjct: 27 MSLMEKQKYIEDYDFPYCDES 47
>AE013599-3421|AAF46868.1| 404|Drosophila melanogaster CG5179-PA
protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 200 IELLEKQKMVEDWHFKYCSSS 138
+ L+EKQK +ED+ F YC S
Sbjct: 27 MSLMEKQKYIEDYDFPYCDES 47
>BT010251-1|AAQ23569.1| 512|Drosophila melanogaster RE38958p
protein.
Length = 512
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 526 SKYSTAFENSGTSDSPSVPPTIGTLVYRGSRHRALAASVLARISGTAREPSTFRGSYQPV 705
S ++ +++G+S SP++ + + S + A AA+ L R S + PS+ S
Sbjct: 206 SSHAPTQQSNGSSVSPTIVSRVAAVGTPSSSNIAAAANALLRASAASTAPSSSASSSSSS 265
Query: 706 SFSVSAINGTIQS 744
S + S+ + + S
Sbjct: 266 SSASSSSSSSSSS 278
>AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p
protein.
Length = 609
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 421 SLRSAALTQAPSVLVTAVWAPRTASVIIRALCLAKSKYSTAFENSGTSDSPSVPPT 588
++RSA + AP+ TA AP TA + + +T NS +S S V T
Sbjct: 428 NIRSAGIATAPTGTATAAIAPLTAVLNHTTTITTTTNNTTTSSNSNSSGSIGVAAT 483
>AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-PA
protein.
Length = 609
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 421 SLRSAALTQAPSVLVTAVWAPRTASVIIRALCLAKSKYSTAFENSGTSDSPSVPPT 588
++RSA + AP+ TA AP TA + + +T NS +S S V T
Sbjct: 428 NIRSAGIATAPTGTATAAIAPLTAVLNHTTTITTTTNNTTTSSNSNSSGSIGVAAT 483
>AE013599-2472|AAF57860.2| 512|Drosophila melanogaster CG14478-PB,
isoform B protein.
Length = 512
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 526 SKYSTAFENSGTSDSPSVPPTIGTLVYRGSRHRALAASVLARISGTAREPSTFRGSYQPV 705
S ++ +++G+S SP++ + + S + A AA+ L R S + PS+ S
Sbjct: 206 SSHAPTQQSNGSSVSPTIVSRVAAVGTPSSSNIAAAANALLRASAASTAPSSSASSSSSS 265
Query: 706 SFSVSAINGTIQS 744
S + S+ + + S
Sbjct: 266 SSASSSSSSSSSS 278
>AE013599-2471|AAF57859.1| 512|Drosophila melanogaster CG14478-PA,
isoform A protein.
Length = 512
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 526 SKYSTAFENSGTSDSPSVPPTIGTLVYRGSRHRALAASVLARISGTAREPSTFRGSYQPV 705
S ++ +++G+S SP++ + + S + A AA+ L R S + PS+ S
Sbjct: 206 SSHAPTQQSNGSSVSPTIVSRVAAVGTPSSSNIAAAANALLRASAASTAPSSSASSSSSS 265
Query: 706 SFSVSAINGTIQS 744
S + S+ + + S
Sbjct: 266 SSASSSSSSSSSS 278
>DQ507278-1|ABG24573.1| 829|Drosophila melanogaster roadkill
isoform E protein.
Length = 829
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 493 SVIIRALCLAKSKYSTAFENSGTSDSPSVPPTIGTLVYR-GSRHRALAASVLARISGTAR 669
S+I L A S S++ +S ++ S SV + + + S H AL S+ RI+ + R
Sbjct: 252 SIIASRLFGAASSSSSSSSSSASASSSSVAASSSSSSHHLHSHHSALTNSITNRINQSIR 311
Query: 670 EPSTFRGSYQPVSFSVSAINGT 735
+ + P+S S S+ + +
Sbjct: 312 RHLNQQQHHHPLSASSSSASAS 333
>BT021321-1|AAX33469.1| 829|Drosophila melanogaster RE09049p
protein.
Length = 829
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 493 SVIIRALCLAKSKYSTAFENSGTSDSPSVPPTIGTLVYR-GSRHRALAASVLARISGTAR 669
S+I L A S S++ +S ++ S SV + + + S H AL S+ RI+ + R
Sbjct: 252 SIIASRLFGAASSSSSSSSSSASASSSSVAASSSSSSHHLHSHHSALTNSITNRINQSIR 311
Query: 670 EPSTFRGSYQPVSFSVSAINGT 735
+ + P+S S S+ + +
Sbjct: 312 RHLNQQQHHHPLSASSSSASAS 333
>AE014297-1781|AAF55008.2| 829|Drosophila melanogaster CG9924-PE,
isoform E protein.
Length = 829
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 493 SVIIRALCLAKSKYSTAFENSGTSDSPSVPPTIGTLVYR-GSRHRALAASVLARISGTAR 669
S+I L A S S++ +S ++ S SV + + + S H AL S+ RI+ + R
Sbjct: 252 SIIASRLFGAASSSSSSSSSSASASSSSVAASSSSSSHHLHSHHSALTNSITNRINQSIR 311
Query: 670 EPSTFRGSYQPVSFSVSAINGT 735
+ + P+S S S+ + +
Sbjct: 312 RHLNQQQHHHPLSASSSSASAS 333
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,555,472
Number of Sequences: 53049
Number of extensions: 766759
Number of successful extensions: 2180
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2175
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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