Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14l03
(420 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC043144-1|AAH43144.1| 1163|Homo sapiens regulating synaptic mem... 31 1.2
AB018294-1|BAA34471.2| 1200|Homo sapiens KIAA0751 protein protein. 31 1.2
M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel al... 29 4.8
M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel al... 29 4.8
AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel, voltag... 29 4.8
AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel, voltag... 29 4.8
AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel, voltag... 29 4.8
AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel, voltag... 29 4.8
AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel, voltag... 29 4.8
AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel, voltag... 29 4.8
AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel, voltag... 29 4.8
AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel, voltag... 29 4.8
AC004755-2|AAC17601.1| 908|Homo sapiens fos37502_2 protein. 29 4.8
AB209467-1|BAD92704.1| 1370|Homo sapiens calcium channel, voltag... 29 4.8
BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 29 6.3
AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protei... 29 6.3
AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 29 6.3
AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 29 6.3
AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein. 29 6.3
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 29 6.3
X66403-1|CAA47030.1| 493|Homo sapiens acetylcholine receptor ep... 29 8.4
AF105999-1|AAD24503.1| 493|Homo sapiens acetylcholine receptor ... 29 8.4
>BC043144-1|AAH43144.1| 1163|Homo sapiens regulating synaptic membrane
exocytosis 2 protein.
Length = 1163
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 114 RSSPSSPAITR--PRVGS*LARARIT*FLRAGPHSGSRGRMMPQYSPAET 257
RS+P SPA++R PR GS T P +G RGR +PQ P T
Sbjct: 879 RSAPPSPALSRSHPRTGSVQTSPSST------PVAGRRGRQLPQLPPKGT 922
>AB018294-1|BAA34471.2| 1200|Homo sapiens KIAA0751 protein protein.
Length = 1200
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 114 RSSPSSPAITR--PRVGS*LARARIT*FLRAGPHSGSRGRMMPQYSPAET 257
RS+P SPA++R PR GS T P +G RGR +PQ P T
Sbjct: 916 RSAPPSPALSRSHPRTGSVQTSPSST------PVAGRRGRQLPQLPPKGT 959
>M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel alpha-1
subunit protein.
Length = 2237
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2099 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2129
>M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel alpha-1
subunit protein.
Length = 2339
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2099 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2129
>AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alphar), member 6 protein.
Length = 2337
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2097 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2127
>AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2339
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2099 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2129
>AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2338
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2098 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2128
>AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha7a (RPL7A) protein.
Length = 2237
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2099 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2129
>AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alpha(TBP)-associated factor,
100kD protein.
Length = 2337
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2097 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2127
>AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alphabeta family protein.
Length = 2339
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2099 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2129
>AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alphaate 3A protein.
Length = 2338
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2098 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2128
>AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha, alpha protein.
Length = 2237
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 2099 RRERERRQERGRSQERRQPSSSSSEKQRFYS 2129
>AC004755-2|AAC17601.1| 908|Homo sapiens fos37502_2 protein.
Length = 908
Score = 29.5 bits (63), Expect = 4.8
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -3
Query: 217 LPECGPA--RKNQVMRARANQEPTRGRVIAGDDGLLRRQSATKPRTDRAFLSHYCNFIYL 44
LP+CGPA R +Q R RA G + GDD LL A P + A ++ NF Y+
Sbjct: 306 LPQCGPAAPRADQRGRGRAGVLAPAGHLPHGDDQLL--YQAASP-DEGALVTAARNFGYV 362
Query: 43 LV 38
+
Sbjct: 363 FL 364
>AB209467-1|BAD92704.1| 1370|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1B subunit variant
protein.
Length = 1370
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 383 RRWQERRQTEDQRGERRTSASSTKDEKRPYS 291
RR +ERRQ + ERR +SS+ +++R YS
Sbjct: 1130 RRERERRQERGRSQERRQPSSSSSEKQRFYS 1160
>BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 351 PARRAKNISVQYKRRE---AAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRAR--I 187
P RRAK+ S++ KRRE + SP D R S AS + + R+R I
Sbjct: 388 PGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPI 447
Query: 186 R*CVRAPIRSQRA 148
R R+P+R R+
Sbjct: 448 RRRSRSPLRRSRS 460
>AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protein
kinase protein.
Length = 1007
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 351 PARRAKNISVQYKRRE---AAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRAR--I 187
P RRAK+ S++ KRRE + SP D R S AS + + R+R I
Sbjct: 388 PGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPI 447
Query: 186 R*CVRAPIRSQRA 148
R R+P+R R+
Sbjct: 448 RRRSRSPLRRSRS 460
>AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 351 PARRAKNISVQYKRRE---AAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRAR--I 187
P RRAK+ S++ KRRE + SP D R S AS + + R+R I
Sbjct: 388 PGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPI 447
Query: 186 R*CVRAPIRSQRA 148
R R+P+R R+
Sbjct: 448 RRRSRSPLRRSRS 460
>AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 351 PARRAKNISVQYKRRE---AAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRAR--I 187
P RRAK+ S++ KRRE + SP D R S AS + + R+R I
Sbjct: 388 PGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPI 447
Query: 186 R*CVRAPIRSQRA 148
R R+P+R R+
Sbjct: 448 RRRSRSPLRRSRS 460
>AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein.
Length = 1007
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 351 PARRAKNISVQYKRRE---AAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRAR--I 187
P RRAK+ S++ KRRE + SP D R S AS + + R+R I
Sbjct: 388 PGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPI 447
Query: 186 R*CVRAPIRSQRA 148
R R+P+R R+
Sbjct: 448 RRRSRSPLRRSRS 460
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 29.1 bits (62), Expect = 6.3
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 351 PARRAKNISVQYKRRE---AAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRAR--I 187
P RRAK+ S++ KRRE + SP D R S AS + + R+R I
Sbjct: 409 PGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPI 468
Query: 186 R*CVRAPIRSQRA 148
R R+P+R R+
Sbjct: 469 RRRSRSPLRRSRS 481
>X66403-1|CAA47030.1| 493|Homo sapiens acetylcholine receptor
epsilon subunit CHRNE protein.
Length = 493
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -1
Query: 351 PARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRARIR*CVR 172
P RRA ++ + + E ++ P + R R+G+ A+ C +A +R CV
Sbjct: 368 PPRRASSVGLLLRAEELILKKPRSELVFEGQRHRQGTWTAAFCQSLGAA--APEVRCCVD 425
Query: 171 A 169
A
Sbjct: 426 A 426
>AF105999-1|AAD24503.1| 493|Homo sapiens acetylcholine receptor
epsilon subunit protein.
Length = 493
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -1
Query: 351 PARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRARIR*CVR 172
P RRA ++ + + E ++ P + R R+G+ A+ C +A +R CV
Sbjct: 368 PPRRASSVGLLLRAEELILKKPRSELVFEGQRHRQGTWTAAFCQSLGAA--APEVRCCVD 425
Query: 171 A 169
A
Sbjct: 426 A 426
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,148,196
Number of Sequences: 237096
Number of extensions: 1207074
Number of successful extensions: 8715
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8663
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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