Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14k15
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060741-1|AAL28289.1|  287|Drosophila melanogaster GH19142p pro...    35   0.13 
AE014134-3076|AAN11033.1|  287|Drosophila melanogaster CG17549-P...    35   0.13 
AE014134-3075|AAF53789.2|  262|Drosophila melanogaster CG17549-P...    35   0.13 
AE014134-3074|AAF53788.1|  262|Drosophila melanogaster CG17549-P...    35   0.13 
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB...    29   6.7  
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD...    29   6.7  
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA...    29   6.7  
AY075499-1|AAL68309.1|  667|Drosophila melanogaster RE51073p pro...    29   8.8  
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei...    29   8.8  
AE014134-110|AAF51492.1|  667|Drosophila melanogaster CG4133-PA ...    29   8.8  

>AY060741-1|AAL28289.1|  287|Drosophila melanogaster GH19142p
           protein.
          Length = 287

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 457 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 371
           + NG+  + R A+T VN+NGK+T Y V +
Sbjct: 259 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 287


>AE014134-3076|AAN11033.1|  287|Drosophila melanogaster CG17549-PA,
           isoform A protein.
          Length = 287

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 457 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 371
           + NG+  + R A+T VN+NGK+T Y V +
Sbjct: 259 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 287


>AE014134-3075|AAF53789.2|  262|Drosophila melanogaster CG17549-PC,
           isoform C protein.
          Length = 262

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 457 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 371
           + NG+  + R A+T VN+NGK+T Y V +
Sbjct: 234 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 262


>AE014134-3074|AAF53788.1|  262|Drosophila melanogaster CG17549-PB,
           isoform B protein.
          Length = 262

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 457 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 371
           + NG+  + R A+T VN+NGK+T Y V +
Sbjct: 234 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 262


>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
           isoform B protein.
          Length = 1374

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 699 LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 604
           L+  +PDSP N++P   T   SS+++P P+LA
Sbjct: 403 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 433


>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
           isoform D protein.
          Length = 1450

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 699 LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 604
           L+  +PDSP N++P   T   SS+++P P+LA
Sbjct: 479 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 509


>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
            isoform A protein.
          Length = 2786

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 699  LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 604
            L+  +PDSP N++P   T   SS+++P P+LA
Sbjct: 1815 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 1845


>AY075499-1|AAL68309.1|  667|Drosophila melanogaster RE51073p
           protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 726 HHIHRGSRYLISHRPDSPTNSSPRCRTIRISSARSPEPRLARV 598
           +H H    Y+   RP  PT  +P    +R SS+ +  P   RV
Sbjct: 506 YHRHSPRHYIADQRPVGPTVGTPTQGAVRSSSSNANTPLHHRV 548


>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1462

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 699 LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 604
           L+  +PDSP N++P   T   SS+++P P LA
Sbjct: 491 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPHLA 521


>AE014134-110|AAF51492.1|  667|Drosophila melanogaster CG4133-PA
           protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 726 HHIHRGSRYLISHRPDSPTNSSPRCRTIRISSARSPEPRLARV 598
           +H H    Y+   RP  PT  +P    +R SS+ +  P   RV
Sbjct: 506 YHRHSPRHYIADQRPVGPTVGTPTQGAVRSSSSNANTPLHHRV 548


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,868,430
Number of Sequences: 53049
Number of extensions: 507910
Number of successful extensions: 1388
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)