Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14j19
         (332 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101496-1|AAI01497.1|  840|Homo sapiens ATP13A4 protein protein.      31   0.64 
AY823162-1|AAX24102.1| 1196|Homo sapiens cation-transporting P5-...    31   0.64 
AK095277-1|BAC04520.1|  840|Homo sapiens protein ( Homo sapiens ...    31   0.64 

>BC101496-1|AAI01497.1|  840|Homo sapiens ATP13A4 protein protein.
          Length = 840

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = -3

Query: 297 PP*DISSKLSNIVTTAVPPFKPKRITAS------RQKWAGRWCL-PVRINKISLLPVKYF 139
           PP ++  K  +++T AVPP  P  +T        R K  G +C+ P RIN    L +  F
Sbjct: 426 PPEEVVRKALDVITIAVPPALPAALTTGIIYAQRRLKKRGIFCISPQRINVCGQLNLVCF 485

Query: 138 D 136
           D
Sbjct: 486 D 486


>AY823162-1|AAX24102.1| 1196|Homo sapiens cation-transporting
           P5-ATPase protein.
          Length = 1196

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = -3

Query: 297 PP*DISSKLSNIVTTAVPPFKPKRITAS------RQKWAGRWCL-PVRINKISLLPVKYF 139
           PP ++  K  +++T AVPP  P  +T        R K  G +C+ P RIN    L +  F
Sbjct: 426 PPEEVVRKALDVITIAVPPALPAALTTGIIYAQRRLKKRGIFCISPQRINVCGQLNLVCF 485

Query: 138 D 136
           D
Sbjct: 486 D 486


>AK095277-1|BAC04520.1|  840|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37958 fis, clone CTONG2009534, weakly similar to
           PROBABLE CATION-TRANSPORTING ATPASE W08D2.5 IN
           CHROMOSOME IV ).
          Length = 840

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = -3

Query: 297 PP*DISSKLSNIVTTAVPPFKPKRITAS------RQKWAGRWCL-PVRINKISLLPVKYF 139
           PP ++  K  +++T AVPP  P  +T        R K  G +C+ P RIN    L +  F
Sbjct: 426 PPEEVVRKALDVITIAVPPALPAALTTGIIYAQRRLKKRGIFCISPQRINVCGQLNLVCF 485

Query: 138 D 136
           D
Sbjct: 486 D 486


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,933,931
Number of Sequences: 237096
Number of extensions: 940634
Number of successful extensions: 1624
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)