Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14j19
(332 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75630-1|CAA53295.1| 790|Drosophila melanogaster secreted gelso... 29 1.9
X75629-1|CAA53294.1| 740|Drosophila melanogaster cytoplasmic ge... 29 1.9
L08794-1|AAA28568.1| 790|Drosophila melanogaster protein ( Dros... 29 1.9
AY119662-1|AAM50316.1| 535|Drosophila melanogaster SD07495p pro... 29 1.9
AE014297-22|ABI31119.1| 535|Drosophila melanogaster CG1106-PI, ... 29 1.9
AE014297-21|AAF52162.2| 740|Drosophila melanogaster CG1106-PA, ... 29 1.9
AE014297-20|AAO41510.1| 798|Drosophila melanogaster CG1106-PF, ... 29 1.9
AE014297-19|AAF52164.3| 798|Drosophila melanogaster CG1106-PD, ... 29 1.9
AE014297-18|AAF52163.1| 798|Drosophila melanogaster CG1106-PB, ... 29 1.9
AE014297-17|AAO41509.2| 872|Drosophila melanogaster CG1106-PG, ... 29 1.9
AE014297-16|AAN13333.2| 883|Drosophila melanogaster CG1106-PH, ... 29 1.9
U01035-1|AAC46467.1| 303|Drosophila melanogaster Bottleneck pro... 28 2.5
AE014297-4714|AAF57125.1| 303|Drosophila melanogaster CG1480-PA... 28 2.5
AE014134-1086|AAF52377.2| 948|Drosophila melanogaster CG9508-PA... 27 4.4
AE014134-2018|AAF53056.1| 395|Drosophila melanogaster CG14913-P... 27 5.9
EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein. 27 7.8
AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p pro... 27 7.8
AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA... 27 7.8
>X75630-1|CAA53295.1| 790|Drosophila melanogaster secreted gelsolin
protein.
Length = 790
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 525 GSKDGLLVQTNQGHEPRHF 543
>X75629-1|CAA53294.1| 740|Drosophila melanogaster cytoplasmic
gelsolin protein.
Length = 740
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 475 GSKDGLLVQTNQGHEPRHF 493
>L08794-1|AAA28568.1| 790|Drosophila melanogaster protein (
Drosophila melanogastersecretoty gelsolin mRNA, complete
cds. ).
Length = 790
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 525 GSKDGLLVQTNQGHEPRHF 543
>AY119662-1|AAM50316.1| 535|Drosophila melanogaster SD07495p
protein.
Length = 535
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 319 GSKDGLLVQTNQGHEPRHF 337
>AE014297-22|ABI31119.1| 535|Drosophila melanogaster CG1106-PI,
isoform I protein.
Length = 535
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 319 GSKDGLLVQTNQGHEPRHF 337
>AE014297-21|AAF52162.2| 740|Drosophila melanogaster CG1106-PA,
isoform A protein.
Length = 740
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 475 GSKDGLLVQTNQGHEPRHF 493
>AE014297-20|AAO41510.1| 798|Drosophila melanogaster CG1106-PF,
isoform F protein.
Length = 798
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 533 GSKDGLLVQTNQGHEPRHF 551
>AE014297-19|AAF52164.3| 798|Drosophila melanogaster CG1106-PD,
isoform D protein.
Length = 798
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 533 GSKDGLLVQTNQGHEPRHF 551
>AE014297-18|AAF52163.1| 798|Drosophila melanogaster CG1106-PB,
isoform B protein.
Length = 798
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 533 GSKDGLLVQTNQGHEPRHF 551
>AE014297-17|AAO41509.2| 872|Drosophila melanogaster CG1106-PG,
isoform G protein.
Length = 872
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 607 GSKDGLLVQTNQGHEPRHF 625
>AE014297-16|AAN13333.2| 883|Drosophila melanogaster CG1106-PH,
isoform H protein.
Length = 883
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 GSKDILLIRTGRHHRPAHF 208
GSKD LL++T + H P HF
Sbjct: 618 GSKDGLLVQTNQGHEPRHF 636
>U01035-1|AAC46467.1| 303|Drosophila melanogaster Bottleneck
protein.
Length = 303
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 273 LSNIVTTAVPPFKPKRITASRQKWA 199
LS VT VPP KPKR++A+ ++A
Sbjct: 205 LSGSVTGQVPPPKPKRLSATTAQFA 229
>AE014297-4714|AAF57125.1| 303|Drosophila melanogaster CG1480-PA
protein.
Length = 303
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 273 LSNIVTTAVPPFKPKRITASRQKWA 199
LS VT VPP KPKR++A+ ++A
Sbjct: 205 LSGSVTGQVPPPKPKRLSATTAQFA 229
>AE014134-1086|AAF52377.2| 948|Drosophila melanogaster CG9508-PA
protein.
Length = 948
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 107 SYHKVIQCRKSKYFTGSKDIL 169
S+H V+Q + +KYFTG K ++
Sbjct: 568 SHHYVMQAQNAKYFTGLKRLM 588
>AE014134-2018|AAF53056.1| 395|Drosophila melanogaster CG14913-PA
protein.
Length = 395
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 231 KRITASRQKWAGRWCLPVRINKISLLPVKYFDLRHW 124
K + + KW G W L RI LPV+ +RHW
Sbjct: 250 KILCTFKNKWGGPWLLMTRIE----LPVR-VHMRHW 280
>EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p
protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
>AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA
protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 246 PPFKPKRITASRQKWAGRWCL 184
P KP + + KW RWCL
Sbjct: 316 PTCKPFELKIAAAKWLNRWCL 336
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,736,527
Number of Sequences: 53049
Number of extensions: 285419
Number of successful extensions: 521
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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