Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14j19
(332 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 0.42
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 0.42
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 2.2
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 2.2
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 3.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 5.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 5.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 5.2
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 20 6.8
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 20 9.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 0.42
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 239 SNRNALLLHGRNGQGGGAYPCGLT 168
S +++LLH ++G GGA G T
Sbjct: 1415 STSSSILLHWKSGHNGGASLTGYT 1438
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 0.42
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 239 SNRNALLLHGRNGQGGGAYPCGLT 168
S +++LLH ++G GGA G T
Sbjct: 1411 STSSSILLHWKSGHNGGASLTGYT 1434
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 2.2
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 21 ITHIILSLLKYIDKQAHG 74
+ HI++ ++K + K+ HG
Sbjct: 142 LEHIVIGIVKTVAKKLHG 159
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 2.2
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 21 ITHIILSLLKYIDKQAHG 74
+ HI++ ++K + K+ HG
Sbjct: 142 LEHIVIGIVKTVAKKLHG 159
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.0 bits (42), Expect = 3.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 30 IILSLLKYIDKQAHGKFDV*WL 95
IILS YIDK +F WL
Sbjct: 101 IILSSNVYIDKSTEYRFFKPWL 122
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 5.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 140 KYFTGSKDILLIRTGRHHRPAHFCRE 217
KY T S + G H +H+ RE
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSHYSRE 234
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 5.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 140 KYFTGSKDILLIRTGRHHRPAHFCRE 217
KY T S + G H +H+ RE
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSHYSRE 234
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 5.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 140 KYFTGSKDILLIRTGRHHRPAHFCRE 217
KY T S + G H +H+ RE
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSHYSRE 234
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 5.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 140 KYFTGSKDILLIRTGRHHRPAHFCRE 217
KY T S + G H +H+ RE
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSHYSRE 234
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 5.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 140 KYFTGSKDILLIRTGRHHRPAHFCRE 217
KY T S + G H +H+ RE
Sbjct: 198 KYATSSNSLRSRTHGFQHTSSHYSRE 223
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 5.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 140 KYFTGSKDILLIRTGRHHRPAHFCRE 217
KY T S + G H +H+ RE
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSHYSRE 234
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 20.2 bits (40), Expect = 6.8
Identities = 5/18 (27%), Positives = 9/18 (50%)
Frame = -3
Query: 243 PFKPKRITASRQKWAGRW 190
P + +R+T W +W
Sbjct: 56 PLRHRRVTCDVLSWQSKW 73
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 19.8 bits (39), Expect = 9.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 278 LSSQI*LQRLSHPSNRNAL 222
L S I RLSHP + N L
Sbjct: 348 LPSAILAMRLSHPLHGNLL 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,914
Number of Sequences: 438
Number of extensions: 1998
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7466580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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