Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14j07
(219 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 34 0.016
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 0.19
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 0.34
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 0.34
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 0.34
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 0.45
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 0.78
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 1.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 1.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 27 1.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 27 1.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 27 1.8
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 27 2.4
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 26 3.2
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical pr... 26 4.2
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 26 4.2
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 26 4.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 26 4.2
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 26 4.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 26 4.2
AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical ... 26 4.2
Z81475-3|CAB03909.1| 303|Caenorhabditis elegans Hypothetical pr... 25 5.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 25 5.5
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 25 5.5
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 25 7.3
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 25 7.3
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 25 7.3
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 25 7.3
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 25 7.3
Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical p... 25 9.6
Z73972-9|CAB60280.2| 353|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z71177-10|CAB60279.2| 353|Caenorhabditis elegans Hypothetical p... 25 9.6
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z29560-6|CAA82658.1| 156|Caenorhabditis elegans Hypothetical pr... 25 9.6
AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical... 25 9.6
AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical ... 25 9.6
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 33.9 bits (74), Expect = 0.016
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 145 CPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPC 32
C P C P C+P C PL Q+ VP +C P PC
Sbjct: 372 CVPSCMPA-CQPSCTNPVPLTTQAPVPVVNQCIP--PC 406
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.15
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 148 YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 44
Y P +P C+P C PA C P +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVP 153
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.3 bits (65), Expect = 0.19
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 148 YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 44
Y P +P C+P C PA C P +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAPVQCVP 153
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.5 bits (63), Expect = 0.34
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 130 SPPDCRPICGPASPLLCQSSVPPTQRCYP 44
+P C+P C PA C + P T +C P
Sbjct: 124 APVQCQPSCMPACEQSCVAPAPVTVQCVP 152
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.5 bits (63), Expect = 0.34
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 130 SPPDCRPICGPASPLLCQSSVPPTQRCYP 44
+P C+P C PA C + P T +C P
Sbjct: 125 APVQCQPSCMPACEQSCVAPAPVTVQCVP 153
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 0.34
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 133 CSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPC 32
C PP+ +P C C +SVPP R P PC
Sbjct: 200 CCPPE-QPCCPELKLDNCLASVPPCLRACPSCPC 232
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = -3
Query: 142 PPVCSPPDCRPI-------CGPASPLLCQSSVPPTQRCYPVNPC 32
P C+ P+CRP+ CG PL ++ + T C P++ C
Sbjct: 1255 PVKCTTPECRPVAKCIPNMCGTGEPLALENHLLAT--CSPISSC 1296
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 0.78
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVP 65
P C PP P C P++P++ P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPP 145
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVP 65
P C PP P C P +P++ P
Sbjct: 93 PACPPPCFGPACAPPAPIIVNGPPP 117
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVP 65
P C PP P C P +P++ P
Sbjct: 65 PACPPPCFGPACVPLAPIIVNGPPP 89
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 145 CPPVCSPPDCRPICGPASPLL 83
CPP C P C P P +P+L
Sbjct: 151 CPPPCFGPACAP--PPPAPIL 169
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.9 bits (59), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Frame = -3
Query: 154 MGYCPPVC-----SPPDCRPICGPASPLLCQSSVPPT--QRCYPV-NP-CINIYQL 14
M C P C P +C P C P+ C V P+ Q+C PV P CI Q+
Sbjct: 112 MPLCLPACINAIQGPTECAPQCMPSCSSNCIQQVFPSCPQQCQPVCTPQCIQSIQV 167
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%)
Frame = -3
Query: 145 CPPVCSPPDCRPICGPASPLLC----QSSV---PPTQRC 50
CP +CS +C P C P C Q SV PP RC
Sbjct: 224 CPSICSQANCIPQCMPRCLPTCIQQIQISVPLPPPAPRC 262
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 118 CRPICGPASPLLCQSSVPPTQRCYP 44
C P C P+ C S+ P Q+CYP
Sbjct: 306 CLPACMPSCTSSCVQSMCP-QQCYP 329
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 142 PPVCSPPDCRPICGPASPLLC-QSSVPPTQRCYPVNPC 32
PP C PP P+C P PL C + P Q C P C
Sbjct: 27 PPPCPPPP-PPMCAP-PPLPCPPPPICPPQFCPPPPMC 62
Score = 27.5 bits (58), Expect = 1.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = -3
Query: 148 YCPPVCSPPDCRPICGPASPLLCQSSVPPTQ-----RCYPVNPCINIYQLLHSN 2
+CPP PP C P P P +C PP + Y P N Y + +N
Sbjct: 55 FCPP---PPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAPVFNQYAMQPAN 105
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = -3
Query: 145 CPPVCSP--PDCRPICGPA-SPLLCQSSVPPTQRCYPVNPCINI 23
CPP +P P C P P SPL+C P P NPC I
Sbjct: 110 CPPPPAPAAPCCPPPPPPTPSPLVCCKQAP-----VPENPCCQI 148
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -3
Query: 142 PPVCSPPDCRPI---CGPASPLLCQSSVPPTQRCYPVNP 35
P VCS P RP+ CG A P+ C + P RC + P
Sbjct: 182 PCVCSAP--RPVPCRCG-APPMECPNCDMPAPRCSMMAP 217
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 133 CSPPDCRPICGPASPLLCQSSV--PPTQRCYPVNPCINIYQ 17
C PP P+C P P C + PP P + +YQ
Sbjct: 241 CLPPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPPVTMYQ 281
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNP 35
PVC PP P P +C PP C P P
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -3
Query: 142 PPVCSPPDCRPI-CGPASPLLCQSSVP 65
PP+C PP P+ C P P + + S P
Sbjct: 68 PPICPPPPPPPMPCPPPPPPMPRPSCP 94
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 145 CPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCI 29
CP PP PIC P P PP P PC+
Sbjct: 60 CPAQFCPPP--PICPPPPPPPMPCPPPPPPMPRPSCPCM 96
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 145 CPPVC-SPPDCRPICGPASPLLCQSSVPPTQRCYPVNP 35
C P C P C P+C P P C + PP C V P
Sbjct: 48 CAPACPQAPSC-PVCPPPQP--CPA--PPAAYCPQVQP 80
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 145 CPPVCSPPDCRPICGPASPLLCQSSVPPTQR 53
C P C P + C PA +C SS Q+
Sbjct: 178 CMPACLPSCVQSSCAPACQPMCSSSCVQQQQ 208
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -3
Query: 145 CPPVCSPPDCRPICGPASPLLCQSSVPPTQR 53
C P C P + C PA +C S Q+
Sbjct: 225 CMPSCQPSCVQQACAPACQPMCSSQCVEQQQ 255
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/39 (30%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = -3
Query: 154 MGYCPPVCSPPD--CRPICGPASPLLCQSSVPPTQRCYP 44
M C P C C C P+ C S+ Q C P
Sbjct: 323 MPQCTPQCVQQQTICAAACQPSCQSSCSSNAQCVQACLP 361
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 26.2 bits (55), Expect = 3.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -1
Query: 114 VRSVDLHLRSFARAACHQH 58
+ +D+H+ +RA CH H
Sbjct: 483 INHIDMHMAHVSRAVCHSH 501
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 118 CRPICGPASPLLCQSSVPPTQRCYP 44
C P C PA C +V T+ C P
Sbjct: 298 CIPACQPACTPQCVQAVTTTETCIP 322
>Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical
protein F59F5.5 protein.
Length = 388
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 118 CRPICGPASPLLCQSSVPPTQRCYPVNPC 32
C+ + G P+ C PP ++C N C
Sbjct: 16 CKTVNGKVDPVNCDCKSPPNEQC-SANAC 43
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 145 CPPVCSPPDCRPICGPASP 89
C P C C+P C PA+P
Sbjct: 317 CAPQCDA-QCQPACSPAAP 334
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 154 MGYCPPVCSPPDCRPICGPASPLL 83
MGY PP+ P P+ P +P++
Sbjct: 23 MGYAPPIAPIPMVAPMPVPVAPMM 46
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -3
Query: 142 PPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNP 35
PP SPP RP P SP PP+ P NP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPE--PRNP 183
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 148 YCPPVCSPPDCRPICGPASPLLCQSSVP 65
Y P +P C+P C PA C + P
Sbjct: 119 YTPVAPAPVQCQPSCMPACEQSCVAPAP 146
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 148 YCPPVCSPPDCRPICGPASPLLCQSSVP 65
Y P +P C+P C PA C + P
Sbjct: 119 YTPVAPAPVQCQPSCMPACEQSCVAPAP 146
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -3
Query: 145 CP---PVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCIN 26
CP PVC+ P C P P P +P Y PC N
Sbjct: 29 CPEPMPVCATPPCPPQYAPLPP----PPMPAPAPAYNPYPCAN 67
>AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical
protein M04F3.2 protein.
Length = 157
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 36 GFTG*HRCVGGTLLWQRSGDAGPQIGRQSGGEQTGGQ 146
GF G GG ++RS D G GR GG GGQ
Sbjct: 121 GFRGRREARGG---FRRSDDRGGFRGRDGGGGFRGGQ 154
>Z81475-3|CAB03909.1| 303|Caenorhabditis elegans Hypothetical
protein C24H11.3 protein.
Length = 303
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 53 VLSCKSLHQHIPAVTLK 3
V+ +S+H+HIP VT+K
Sbjct: 127 VILVQSMHKHIPVVTVK 143
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -3
Query: 124 PDCRPICGPASPLLCQSSVPPTQRCYPVN 38
P CRP C P+ + C P RC N
Sbjct: 309 PSCRPDCMPSCHVDCLIIPPQQVRCNSFN 337
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 142 PPVCSPPDCRPICGPASP 89
PP C+PP P CG +P
Sbjct: 37 PPACAPPPA-PACGGGAP 53
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = -3
Query: 148 YCPPVCSPP----DCRPICGPASPLLCQSSVPPTQRCYP 44
Y PP + P C+P+C C P +C P
Sbjct: 118 YNPPATTTPAPVVQCQPMCQQQCQSTCVQQQQPASQCQP 156
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/32 (28%), Positives = 12/32 (37%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 44
PV C+P+C C P +C P
Sbjct: 130 PVVQYQQCQPVCQQQCQSTCVQQQQPAAQCQP 161
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -3
Query: 118 CRPICGPASPLLCQSSVPPTQRCYPVNPCIN 26
C P C +CQ + TQ+ Y N +N
Sbjct: 219 CEPACNTQCSDICQQTAQATQQVYNNNQNMN 249
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/32 (28%), Positives = 12/32 (37%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 44
PV C+P+C C P +C P
Sbjct: 130 PVVQYQQCQPVCQQQCQSTCVQQQQPAAQCQP 161
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/32 (28%), Positives = 12/32 (37%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 44
PV C+P+C C P +C P
Sbjct: 130 PVVQYQQCQPVCQQQCQSTCVQQQQPAAQCQP 161
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/32 (28%), Positives = 12/32 (37%)
Frame = -3
Query: 139 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 44
PV C+P+C C P +C P
Sbjct: 130 PVVQYQQCQPVCQQQCQSTCVQQQQPAAQCQP 161
>Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 148 YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCY-PVNPCI 29
+C P+ PDC + P++ C + T Y V+ CI
Sbjct: 292 FCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCI 332
>Z73972-9|CAB60280.2| 353|Caenorhabditis elegans Hypothetical
protein F15H10.8 protein.
Length = 353
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 153 IFYFFNL*TCKFKKLYEY 206
+F+ FN+ T KFK+ Y Y
Sbjct: 6 LFHDFNVRTSKFKEFYRY 23
>Z71177-10|CAB60279.2| 353|Caenorhabditis elegans Hypothetical
protein F15H10.8 protein.
Length = 353
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 153 IFYFFNL*TCKFKKLYEY 206
+F+ FN+ T KFK+ Y Y
Sbjct: 6 LFHDFNVRTSKFKEFYRY 23
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
ZK287.4 protein.
Length = 1208
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -3
Query: 157 KMGYCPP--VCSPPDCRPICGPASPLLCQSSVPPTQRC 50
K CP VC+P C P+ C S PP C
Sbjct: 1091 KAAKCPGDHVCTPRGNEAYCCPSPMNFCLQSRPPISVC 1128
>Z29560-6|CAA82658.1| 156|Caenorhabditis elegans Hypothetical
protein K03H1.6 protein.
Length = 156
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 40 LQDSTVVLVARCSGK---GAEMQVHRSDDNPEVNRLVDNNPFFTF 165
LQ V C GK G + + SD+N E ++D+N F +
Sbjct: 23 LQSVAVSGQLNCLGKPAVGVRIDLMESDNNGEETGIIDDNDFMGY 67
>AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 148 YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCY-PVNPCI 29
+C P+ PDC + P++ C + T Y V+ CI
Sbjct: 292 FCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCI 332
>AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical
protein VW02B12L.3 protein.
Length = 299
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 142 PPVCSPPDCRPICGPASPLLCQSSVPPTQR 53
P +PP RP + ++SVPPT R
Sbjct: 154 PVAAAPPKPRPAAPAVAAPAVKASVPPTVR 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,023,980
Number of Sequences: 27780
Number of extensions: 97897
Number of successful extensions: 527
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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