Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14j04
(368 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican hom... 28 3.3
BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p pro... 28 3.3
BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p pro... 28 3.3
BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p pro... 28 3.3
BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p pro... 28 3.3
AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p pro... 28 3.3
AY119510-1|AAM50164.1| 998|Drosophila melanogaster GH12664p pro... 28 3.3
AE014297-4541|AAN14216.1| 742|Drosophila melanogaster CG31025-P... 28 3.3
AE014297-4540|AAF57010.4| 998|Drosophila melanogaster CG31025-P... 28 3.3
AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-P... 28 3.3
X95179-1|CAA64486.1| 716|Drosophila melanogaster araucan homeop... 27 5.8
BT004853-1|AAO45209.1| 443|Drosophila melanogaster RE66853p pro... 27 5.8
AE014296-2164|AAF49896.1| 717|Drosophila melanogaster CG10571-P... 27 5.8
D50542-1|BAA09102.1| 486|Drosophila melanogaster GATA transcrip... 27 7.7
AY119444-1|AAM50098.1| 1133|Drosophila melanogaster AT03104p pro... 27 7.7
AY071369-1|AAL48991.1| 486|Drosophila melanogaster RE40104p pro... 27 7.7
AY061587-1|AAL29135.1| 842|Drosophila melanogaster SD03976p pro... 27 7.7
AF001796-1|AAB63271.1| 959|Drosophila melanogaster putative Kru... 27 7.7
AE014297-3436|AAN13968.1| 1175|Drosophila melanogaster CG5405-PB... 27 7.7
AE014297-3435|AAF56220.3| 1175|Drosophila melanogaster CG5405-PA... 27 7.7
AE014297-3434|AAN13970.2| 1133|Drosophila melanogaster CG5405-PC... 27 7.7
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 27 7.7
AE014297-700|AAF54195.1| 486|Drosophila melanogaster CG9656-PA ... 27 7.7
>X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican
homeoprotein protein.
Length = 693
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 179 FGDVHPGVVIGHKPCMFLRPGLPVPAKMGWLWNAADTPGAK-PRXWMAALG 30
+G G K + G+PVPA +W+ ADT K P A LG
Sbjct: 432 YGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAAYLG 482
>BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p
protein.
Length = 693
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 179 FGDVHPGVVIGHKPCMFLRPGLPVPAKMGWLWNAADTPGAK-PRXWMAALG 30
+G G K + G+PVPA +W+ ADT K P A LG
Sbjct: 432 YGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAAYLG 482
>BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p
protein.
Length = 693
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 179 FGDVHPGVVIGHKPCMFLRPGLPVPAKMGWLWNAADTPGAK-PRXWMAALG 30
+G G K + G+PVPA +W+ ADT K P A LG
Sbjct: 432 YGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAAYLG 482
>BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p
protein.
Length = 742
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Frame = -1
Query: 110 VPAKMGWLWNA---ADTPGAKP 54
VP+ MGWLW A A+ PG +P
Sbjct: 347 VPSHMGWLWTAHPLANKPGWRP 368
>BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p
protein.
Length = 998
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Frame = -1
Query: 110 VPAKMGWLWNA---ADTPGAKP 54
VP+ MGWLW A A+ PG +P
Sbjct: 603 VPSHMGWLWTAHPLANKPGWRP 624
>AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p
protein.
Length = 325
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 179 FGDVHPGVVIGHKPCMFLRPGLPVPAKMGWLWNAADTPGAK-PRXWMAALG 30
+G G K + G+PVPA +W+ ADT K P A LG
Sbjct: 64 YGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAAYLG 114
>AY119510-1|AAM50164.1| 998|Drosophila melanogaster GH12664p
protein.
Length = 998
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Frame = -1
Query: 110 VPAKMGWLWNA---ADTPGAKP 54
VP+ MGWLW A A+ PG +P
Sbjct: 603 VPSHMGWLWTAHPLANKPGWRP 624
>AE014297-4541|AAN14216.1| 742|Drosophila melanogaster CG31025-PB,
isoform B protein.
Length = 742
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Frame = -1
Query: 110 VPAKMGWLWNA---ADTPGAKP 54
VP+ MGWLW A A+ PG +P
Sbjct: 347 VPSHMGWLWTAHPLANKPGWRP 368
>AE014297-4540|AAF57010.4| 998|Drosophila melanogaster CG31025-PA,
isoform A protein.
Length = 998
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Frame = -1
Query: 110 VPAKMGWLWNA---ADTPGAKP 54
VP+ MGWLW A A+ PG +P
Sbjct: 603 VPSHMGWLWTAHPLANKPGWRP 624
>AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-PA
protein.
Length = 693
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 179 FGDVHPGVVIGHKPCMFLRPGLPVPAKMGWLWNAADTPGAK-PRXWMAALG 30
+G G K + G+PVPA +W+ ADT K P A LG
Sbjct: 432 YGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAAYLG 482
>X95179-1|CAA64486.1| 716|Drosophila melanogaster araucan
homeoprotein protein.
Length = 716
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 119 GLPVPAKMGWLWNAADTPGAK 57
G+P+PA +W+ ADT G K
Sbjct: 456 GVPIPATKPKIWSLADTVGCK 476
>BT004853-1|AAO45209.1| 443|Drosophila melanogaster RE66853p
protein.
Length = 443
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 119 GLPVPAKMGWLWNAADTPGAK 57
G+P+PA +W+ ADT G K
Sbjct: 183 GVPIPATKPKIWSLADTVGCK 203
>AE014296-2164|AAF49896.1| 717|Drosophila melanogaster CG10571-PA
protein.
Length = 717
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 119 GLPVPAKMGWLWNAADTPGAK 57
G+P+PA +W+ ADT G K
Sbjct: 457 GVPIPATKPKIWSLADTVGCK 477
>D50542-1|BAA09102.1| 486|Drosophila melanogaster GATA
transcription factor protein.
Length = 486
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 52 RGFAPGVSAAFHSHPILAGTGKPGLKNMHGLW 147
+GF G SA+ H L+ P +MHG W
Sbjct: 405 KGFGGGFSASMAQHGHLSSGLHPAHAHMHGSW 436
>AY119444-1|AAM50098.1| 1133|Drosophila melanogaster AT03104p
protein.
Length = 1133
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 331 FSVYNNQNCCVGPDQGP-IGSLSINKNPK 248
F + +CC G D GP + S+S+ PK
Sbjct: 436 FQELESLSCCEGDDSGPDMDSISVGSTPK 464
>AY071369-1|AAL48991.1| 486|Drosophila melanogaster RE40104p
protein.
Length = 486
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 52 RGFAPGVSAAFHSHPILAGTGKPGLKNMHGLW 147
+GF G SA+ H L+ P +MHG W
Sbjct: 405 KGFGGGFSASMAQHGHLSSGLHPAHAHMHGSW 436
>AY061587-1|AAL29135.1| 842|Drosophila melanogaster SD03976p
protein.
Length = 842
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 331 FSVYNNQNCCVGPDQGP-IGSLSINKNPK 248
F + +CC G D GP + S+S+ PK
Sbjct: 103 FQELESLSCCEGDDSGPDMDSISVGSTPK 131
>AF001796-1|AAB63271.1| 959|Drosophila melanogaster putative
Krueppel target geneprotein protein.
Length = 959
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 331 FSVYNNQNCCVGPDQGP-IGSLSINKNPK 248
F + +CC G D GP + S+S+ PK
Sbjct: 205 FQELESLSCCEGDDSGPDMDSISVGSTPK 233
>AE014297-3436|AAN13968.1| 1175|Drosophila melanogaster CG5405-PB,
isoform B protein.
Length = 1175
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 331 FSVYNNQNCCVGPDQGP-IGSLSINKNPK 248
F + +CC G D GP + S+S+ PK
Sbjct: 436 FQELESLSCCEGDDSGPDMDSISVGSTPK 464
>AE014297-3435|AAF56220.3| 1175|Drosophila melanogaster CG5405-PA,
isoform A protein.
Length = 1175
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 331 FSVYNNQNCCVGPDQGP-IGSLSINKNPK 248
F + +CC G D GP + S+S+ PK
Sbjct: 436 FQELESLSCCEGDDSGPDMDSISVGSTPK 464
>AE014297-3434|AAN13970.2| 1133|Drosophila melanogaster CG5405-PC,
isoform C protein.
Length = 1133
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 331 FSVYNNQNCCVGPDQGP-IGSLSINKNPK 248
F + +CC G D GP + S+S+ PK
Sbjct: 436 FQELESLSCCEGDDSGPDMDSISVGSTPK 464
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 85 GMRQTLLERSRXRGWQPWGH 26
G R+T LER R + W P H
Sbjct: 665 GSRETSLERQRPKSWAPSSH 684
>AE014297-700|AAF54195.1| 486|Drosophila melanogaster CG9656-PA
protein.
Length = 486
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 52 RGFAPGVSAAFHSHPILAGTGKPGLKNMHGLW 147
+GF G SA+ H L+ P +MHG W
Sbjct: 405 KGFGGGFSASMAQHGHLSSGLHPAHAHMHGSW 436
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,754,701
Number of Sequences: 53049
Number of extensions: 292440
Number of successful extensions: 657
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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