Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14j03
(349 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 0.45
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 2.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 4.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 5.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 7.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 7.3
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 9.6
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 20 9.6
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 20 9.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 20 9.6
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 0.45
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 275 REMLWQVLPTFVIFGVQFLTG 213
R+ L+ VLP VI+ V F+TG
Sbjct: 47 RDPLYIVLPITVIYAVIFVTG 67
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.8 bits (44), Expect = 2.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +3
Query: 240 YECWQNLPKHFSDK 281
+ C+ +L +HF DK
Sbjct: 15 FSCYYSLKRHFQDK 28
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 3.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 176 FFESGHHQVGRGNLSKIGPQI 238
F+ +G +VG G SK+ Q+
Sbjct: 1287 FWVTGSTRVGEGQSSKVAAQV 1307
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 3.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 176 FFESGHHQVGRGNLSKIGPQI 238
F+ +G +VG G SK+ Q+
Sbjct: 1283 FWVTGSTRVGEGQSSKVAAQV 1303
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 4.2
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 162 FMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSDKAKV-*FYSQNKI 314
F F++ +L + + + DP +Y +QN+ +F K+ YSQ+++
Sbjct: 395 FDFQNKNNLIPSALQSYSTSMRDPAFYMLYQNILSYFLRYKKLQPQYSQSEL 446
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.6 bits (41), Expect = 5.5
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = -2
Query: 234 WGPIFDRFPRPTW*WP 187
W P+ D P TW P
Sbjct: 530 WNPLTDTVPIHTWIHP 545
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 7.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 15 NKSSCSNRYLHQYKNEI*HKFKKI 86
N ++ +N Y + Y N + +KK+
Sbjct: 93 NYNNYNNNYNNNYNNNYNNNYKKL 116
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 7.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 15 NKSSCSNRYLHQYKNEI*HKFKKI 86
N ++ +N Y + Y N + +KK+
Sbjct: 93 NYNNYNNNYNNNYNNNYNNNYKKL 116
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.8 bits (39), Expect = 9.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 310 RFCMTCIIFDII 345
RFC T I FD++
Sbjct: 96 RFCDTWIAFDVM 107
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 193 SPSGARKPVKNWTPN 237
SPSG K V + PN
Sbjct: 86 SPSGQNKAVAPYPPN 100
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 193 SPSGARKPVKNWTPN 237
SPSG K V + PN
Sbjct: 86 SPSGQNKAVAPYPPN 100
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 19.8 bits (39), Expect = 9.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 234 KYYECWQNLPKHF 272
KYYE N+P +F
Sbjct: 309 KYYEVGSNVPFNF 321
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,803
Number of Sequences: 438
Number of extensions: 2271
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7936320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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