Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14i20
(453 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 30 4.3
AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer kerat... 30 4.3
AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated prot... 30 4.3
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 29 5.6
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 29 7.4
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 29 7.4
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 29 7.4
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 29 7.4
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 9.8
AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protei... 29 9.8
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 216 CCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 106
CC + CCV A CS SC CG G RG GS
Sbjct: 33 CCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 66
>AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer keratin
protein.
Length = 194
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 216 CCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 106
CC + CCV A CS SC CG G RG GS
Sbjct: 40 CCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 73
>AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated protein
protein.
Length = 187
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 216 CCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 106
CC + CCV A CS SC CG G RG GS
Sbjct: 33 CCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 66
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +1
Query: 64 SSAASDTXVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHSIGQGTA 243
S + SDT +P A+ G ++ AV + + + TS V ++GT+ + ++ +
Sbjct: 3216 SHSKSDTTLPVAITSPGPEASSAVSTTTISPDMSDLVTSLVPSSGTDTSTTFPTLSE--- 3272
Query: 244 RAXHRPLTTQTAITY 288
+ P TT T +T+
Sbjct: 3273 -TPYEPETTATWLTH 3286
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 SRAYLRTANTSLNNKHLSRARNRDQLDRSNPFYRPG-DRTGXT*APDNPNS 278
SR+Y R+ + S + SR+R+R Q + Y PG R + +P P+S
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSS 791
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 SRAYLRTANTSLNNKHLSRARNRDQLDRSNPFYRPG-DRTGXT*APDNPNS 278
SR+Y R+ + S + SR+R+R Q + Y PG R + +P P+S
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSS 791
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +1
Query: 64 SSAASDTXVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHSIGQGTA 243
S + SDT +P A+ G ++ AV + + + TS V ++GT+ + ++ +
Sbjct: 11512 SHSKSDTTLPVAITSPGPEASSAVSTTTISPDMSDLVTSLVPSSGTDTSTTFPTLSE--- 11568
Query: 244 RAXHRPLTTQTAITY 288
+ P TT T +T+
Sbjct: 11569 -TPYEPETTVTWLTH 11582
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 129 SRAYLRTANTSLNNKHLSRARNRDQLDRSNPFYRPG-DRTGXT*APDNPNS 278
SR+Y R+ + S + SR+R+R Q + Y PG R + +P P+S
Sbjct: 256 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSS 306
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 28.7 bits (61), Expect = 9.8
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 43 TARSAEPS-SAASDTXVPTAVVRAGYSSTVAV-HISAPPTRV*T-ISTSRVHATGTNLTA 213
+A S EP+ + + +PT G + ++ S PPT T ++TSR TGT TA
Sbjct: 353 SAGSTEPTVPGVATSTLPTRSALPGTTGSLGTWRPSQPPTLAPTTMATSRARPTGTASTA 412
Query: 214 AIHSIGQGTARAXHRPLTTQTAIT 285
+ + A L+T A T
Sbjct: 413 SKEPLTTSLAPTLTSELSTSQAET 436
>AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protein 2
protein.
Length = 1841
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 52 SAEPSSAASDTXVPTAVVRAGYSSTVAVHISAP 150
S PSS S+T VP+ R + S + ISAP
Sbjct: 880 SPAPSSTKSETRVPSETARTPFKSPLLKGISAP 912
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,299,640
Number of Sequences: 237096
Number of extensions: 1106261
Number of successful extensions: 2427
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2421
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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