Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14i07
         (763 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022570-1|AAY54986.1|  187|Drosophila melanogaster IP06602p pro...    38   0.020
BT022513-1|AAY54929.1|  189|Drosophila melanogaster IP06402p pro...    38   0.020
AE014296-3462|AAF51671.2|  189|Drosophila melanogaster CG10581-P...    38   0.020
D90403-1|BAA14399.1| 2833|Drosophila melanogaster inositol 1,4,5...    29   5.2  
AJ238949-1|CAB51853.1| 2828|Drosophila melanogaster inositol 1,4...    29   5.2  
AE014297-265|AAF52015.2| 2828|Drosophila melanogaster CG1063-PA,...    29   5.2  
AE014297-264|AAN13240.1| 2837|Drosophila melanogaster CG1063-PB,...    29   5.2  

>BT022570-1|AAY54986.1|  187|Drosophila melanogaster IP06602p
           protein.
          Length = 187

 Score = 37.5 bits (83), Expect = 0.020
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 758 TXPVKNRSALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 624
           T P K+  ALVE +R    +K++ +TK NRN L  E+  E+   L
Sbjct: 142 TIPEKSTLALVEQLRKSAGSKIYQVTKFNRNALAGEITEEITKAL 186


>BT022513-1|AAY54929.1|  189|Drosophila melanogaster IP06402p
           protein.
          Length = 189

 Score = 37.5 bits (83), Expect = 0.020
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 758 TXPVKNRSALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 624
           T P K+  ALVE +R    +K++ +TK NRN L  E+  E+   L
Sbjct: 144 TIPEKSTLALVEQLRKSAGSKIYQVTKFNRNALAGEITEEITKAL 188


>AE014296-3462|AAF51671.2|  189|Drosophila melanogaster CG10581-PA
           protein.
          Length = 189

 Score = 37.5 bits (83), Expect = 0.020
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 758 TXPVKNRSALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 624
           T P K+  ALVE +R    +K++ +TK NRN L  E+  E+   L
Sbjct: 144 TIPEKSTLALVEQLRKSAGSKIYQVTKFNRNALAGEITEEITKAL 188


>D90403-1|BAA14399.1| 2833|Drosophila melanogaster inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2833

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 734  ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 624
            A VEN   +   KVW+ T + +NKL  EV+   + ++
Sbjct: 905  AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 941


>AJ238949-1|CAB51853.1| 2828|Drosophila melanogaster inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2828

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 734  ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 624
            A VEN   +   KVW+ T + +NKL  EV+   + ++
Sbjct: 905  AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 941


>AE014297-265|AAF52015.2| 2828|Drosophila melanogaster CG1063-PA,
            isoform A protein.
          Length = 2828

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 734  ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 624
            A VEN   +   KVW+ T + +NKL  EV+   + ++
Sbjct: 904  AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 940


>AE014297-264|AAN13240.1| 2837|Drosophila melanogaster CG1063-PB,
            isoform B protein.
          Length = 2837

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 734  ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 624
            A VEN   +   KVW+ T + +NKL  EV+   + ++
Sbjct: 904  AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 940


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,547,907
Number of Sequences: 53049
Number of extensions: 452675
Number of successful extensions: 809
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)