Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14i01
(539 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p pro... 190 1e-48
AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA... 190 1e-48
AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-P... 33 0.33
DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1 ... 32 0.58
BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p pro... 32 0.58
AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB... 32 0.58
AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC... 32 0.58
AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA... 32 0.58
AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute pr... 32 0.58
BT021238-1|AAX33386.1| 255|Drosophila melanogaster RH05486p pro... 29 5.4
AY113540-1|AAM29545.1| 372|Drosophila melanogaster RE61424p pro... 29 5.4
AL109630-11|CAB65876.1| 251|Drosophila melanogaster EG:BACR7A4.... 29 5.4
AE014298-2921|AAF49010.2| 580|Drosophila melanogaster CG14230-P... 29 5.4
AE014298-134|AAF45573.2| 251|Drosophila melanogaster CG3699-PA ... 29 5.4
AE013599-874|AAF58929.1| 372|Drosophila melanogaster CG1888-PA ... 29 5.4
BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p pro... 28 9.4
BT004497-1|AAO42661.1| 339|Drosophila melanogaster GH12873p pro... 28 9.4
AE013599-3312|AAF46787.1| 346|Drosophila melanogaster CG10138-P... 28 9.4
AE013599-1459|AAM68673.2| 762|Drosophila melanogaster CG30049-P... 28 9.4
>AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p
protein.
Length = 135
Score = 190 bits (463), Expect = 1e-48
Identities = 87/118 (73%), Positives = 101/118 (85%), Gaps = 1/118 (0%)
Frame = -3
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 49
K+ K+SK+KPF+K +NYNHLMPTRYT D SFEK S KDLKDP KRK RF TRV+FE
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFE 118
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1
Query: 41 YKSGKNKWFFQKL 3
YK GKNKWFFQKL
Sbjct: 121 YKEGKNKWFFQKL 133
>AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA
protein.
Length = 135
Score = 190 bits (463), Expect = 1e-48
Identities = 87/118 (73%), Positives = 101/118 (85%), Gaps = 1/118 (0%)
Frame = -3
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 49
K+ K+SK+KPF+K +NYNHLMPTRYT D SFEK S KDLKDP KRK RF TRV+FE
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFE 118
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1
Query: 41 YKSGKNKWFFQKL 3
YK GKNKWFFQKL
Sbjct: 121 YKEGKNKWFFQKL 133
>AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-PA
protein.
Length = 506
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 156 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 70
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 117
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 118 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 160
>BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p
protein.
Length = 984
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 204
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 205 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 247
>AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB,
isoform B protein.
Length = 950
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 170
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 171 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 213
>AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC,
isoform C protein.
Length = 984
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 204
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 205 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 247
>AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA,
isoform A protein.
Length = 984
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 204
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 205 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 247
>AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute
protein protein.
Length = 950
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVK-VVN 172
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V +
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPVFD 170
Query: 171 YNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEV 40
+ + TR + E+ ++ P + K F ++++ +V
Sbjct: 171 GRNNLYTRDPLPIGNERLEL-EVTLPGEGKDRIFRVTIKWQAQV 213
>BT021238-1|AAX33386.1| 255|Drosophila melanogaster RH05486p
protein.
Length = 255
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 PATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGL-LVSHKFN 433
P A YG+S+ F +AL A + ++ ++ PGF++ I + +V ++N
Sbjct: 146 PFAGALSYGVSKAALDQFTKIVALEMAPQGVRVNSVNPGFVVTNIHRNIGIVDEEYN 202
>AY113540-1|AAM29545.1| 372|Drosophila melanogaster RE61424p
protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 84 KKLRFNTRVRFEDEVQKWEEQVVLP 10
+ RF TR+RFE +++W + +P
Sbjct: 81 RNFRFGTRIRFEHHLERWRRWLNVP 105
>AL109630-11|CAB65876.1| 251|Drosophila melanogaster EG:BACR7A4.14
protein.
Length = 251
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 PATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGL-LVSHKFN 433
P A YG+S+ F +AL A + ++ ++ PGF++ I + +V ++N
Sbjct: 142 PFAGALSYGVSKAALDQFTKIVALEMAPQGVRVNSVNPGFVVTNIHRNIGIVDEEYN 198
>AE014298-2921|AAF49010.2| 580|Drosophila melanogaster CG14230-PA
protein.
Length = 580
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/107 (21%), Positives = 50/107 (46%)
Frame = -3
Query: 327 VVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTR 148
V++ + + KP A V+ ++ ++ +M + K+S I+ + V++ R
Sbjct: 170 VIEQHRKAAKQKP--DANVSQAEQKRKESLNKMRQGHQQKKSAIQQALSVISVEGSQAKR 227
Query: 147 YTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEDEVQKWEEQVVLPE 7
F ++ P ++ K++ R FE++ + EEQ+VLP+
Sbjct: 228 ----IKFSDAEEEEASKPVQKAKIQ--KRDLFENDDDEEEEQIVLPQ 268
>AE014298-134|AAF45573.2| 251|Drosophila melanogaster CG3699-PA
protein.
Length = 251
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 PATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGL-LVSHKFN 433
P A YG+S+ F +AL A + ++ ++ PGF++ I + +V ++N
Sbjct: 142 PFAGALSYGVSKAALDQFTKIVALEMAPQGVRVNSVNPGFVVTNIHRNIGIVDEEYN 198
>AE013599-874|AAF58929.1| 372|Drosophila melanogaster CG1888-PA
protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 84 KKLRFNTRVRFEDEVQKWEEQVVLP 10
+ RF TR+RFE +++W + +P
Sbjct: 81 RNFRFGTRIRFEHHLERWRRWLNVP 105
>BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p
protein.
Length = 918
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 22 LFFPLLYLVFKTYSRVETQLLTFC-RVFQVFCAEFFKAEVNCIT--CWHQVIIVYNLHER 192
+FF L L F TY+ +L +C V VF F ++C++ ++ I++ H
Sbjct: 406 VFFDFLGLFFVTYTENTGIILNYCFAVASVFLVGFSLWRMSCVSEVSAGRISILFASHLG 465
Query: 193 LYLGPLVDFILSHPLVHFPGVPVDTSDESM 282
L+L + + PLV + D SD +M
Sbjct: 466 LHLAGCL-LCIGLPLV--MSILYDVSDRTM 492
>BT004497-1|AAO42661.1| 339|Drosophila melanogaster GH12873p
protein.
Length = 339
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 398 ILEGLLVSHKFNILVR 445
I+EG L+ HKFN++VR
Sbjct: 246 IVEGFLMQHKFNLIVR 261
>AE013599-3312|AAF46787.1| 346|Drosophila melanogaster CG10138-PA
protein.
Length = 346
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 398 ILEGLLVSHKFNILVR 445
I+EG L+ HKFN++VR
Sbjct: 246 IVEGFLMQHKFNLIVR 261
>AE013599-1459|AAM68673.2| 762|Drosophila melanogaster CG30049-PA
protein.
Length = 762
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 22 LFFPLLYLVFKTYSRVETQLLTFC-RVFQVFCAEFFKAEVNCIT--CWHQVIIVYNLHER 192
+FF L L F TY+ +L +C V VF F ++C++ ++ I++ H
Sbjct: 280 VFFDFLGLFFVTYTENTGIILNYCFAVASVFLVGFSLWRMSCVSEVSAGRISILFASHLG 339
Query: 193 LYLGPLVDFILSHPLVHFPGVPVDTSDESM 282
L+L + + PLV + D SD +M
Sbjct: 340 LHLAGCL-LCIGLPLV--MSILYDVSDRTM 366
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,877,348
Number of Sequences: 53049
Number of extensions: 488063
Number of successful extensions: 1360
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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