Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14h21
(773 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose) polym... 109 1e-23
BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose) polym... 108 2e-23
AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens ... 72 3e-12
BC075801-1|AAH75801.1| 812|Homo sapiens PARP8 protein protein. 35 0.017
BC110902-1|AAI10903.1| 630|Homo sapiens poly (ADP-ribose) polym... 35 0.018
BC015314-1|AAH15314.1| 563|Homo sapiens PARP6 protein protein. 35 0.018
AK024961-1|BAB15044.1| 501|Homo sapiens protein ( Homo sapiens ... 35 0.018
BC037386-1|AAH37386.1| 494|Homo sapiens PARP8 protein protein. 35 0.28
BC119689-1|AAI19690.1| 554|Homo sapiens PARP6 protein protein. 35 0.37
BC119688-1|AAI19689.1| 554|Homo sapiens PARP6 protein protein. 35 0.37
D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein. 33 0.86
AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polym... 33 0.86
AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein. 33 0.86
AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribos... 33 0.86
BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase... 30 8.0
AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine ... 30 8.0
AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein. 30 8.0
>BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 323
Score = 109 bits (262), Expect = 1e-23
Identities = 54/145 (37%), Positives = 86/145 (59%)
Frame = -3
Query: 771 KWKELSKNHNVFYAYHGNRXENFYTILNFGLQQHLNKNTSLGNGVYLSPELSATIPHSHG 592
K+ E ++ YA+HG+R ENF++I++ GL HLNK + G G YL+ +LS + +S
Sbjct: 137 KFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPH 196
Query: 591 GFGWGASCIGGHLSCVALCEVVDAPEGINYQKPVSNEGDGLYKDGKTDHMRVNGETQVTQ 412
G GW S +G LSCVA+CEV+D P+ + Q + + + + H G+
Sbjct: 197 GHGWQHSLLGPILSCVAVCEVIDHPD-VKCQTKKKDSKEIDRRRARIKHSE-GGDIPPKY 254
Query: 411 YIVTNCDLVRIRYLLVYAKQPASLR 337
++VTN L+R++YLLVY+++P R
Sbjct: 255 FVVTNNQLLRVKYLLVYSQKPPKSR 279
>BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 322
Score = 108 bits (260), Expect = 2e-23
Identities = 53/141 (37%), Positives = 85/141 (60%)
Frame = -3
Query: 771 KWKELSKNHNVFYAYHGNRXENFYTILNFGLQQHLNKNTSLGNGVYLSPELSATIPHSHG 592
K+ E ++ YA+HG+R ENF++I++ GL HLNK + G G YL+ +LS + +S
Sbjct: 137 KFYETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPH 196
Query: 591 GFGWGASCIGGHLSCVALCEVVDAPEGINYQKPVSNEGDGLYKDGKTDHMRVNGETQVTQ 412
G GW S +G LSCVA+CEV+D P+ + Q + + + + H G+
Sbjct: 197 GHGWQHSLLGPILSCVAVCEVIDHPD-VKCQTKKKDSKEIDRRRARIKHSE-GGDIPPKY 254
Query: 411 YIVTNCDLVRIRYLLVYAKQP 349
++VTN L+R++YLLVY+++P
Sbjct: 255 FVVTNNQLLRVKYLLVYSQKP 275
>AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ20509 fis, clone KAT09623. ).
Length = 207
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = -3
Query: 657 TSL-GNGVYLSPELSATIPHSHGGFGWGASCIGGHLSCVALCEVVDAPEGINYQKPVSNE 481
TSL G G YL+ +LS + +S G GW S +G LSCVA+CEV+D P+ + Q +
Sbjct: 59 TSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPD-VKCQTKKKDS 117
Query: 480 GDGLYKDGKTDHMRVNGETQVTQYIVTNCDLVRIRYLLVYAKQP 349
+ + + H G+ ++VTN L+R++YLLVY+++P
Sbjct: 118 KEIDRRRARIKHSE-GGDIPPKYFVVTNNQLLRVKYLLVYSQKP 160
>BC075801-1|AAH75801.1| 812|Homo sapiens PARP8 protein protein.
Length = 812
Score = 35.1 bits (77), Expect(2) = 0.017
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = -3
Query: 735 YAYHGNRXENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHS 598
+A+HG+ EN+++IL GL N L G+G+YLSP S + +S
Sbjct: 652 FAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 702
Score = 23.0 bits (47), Expect(2) = 0.017
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 558 HLSCVALCEVVDAPE 514
+L C+ALCEV+ + +
Sbjct: 742 NLKCIALCEVITSSD 756
>BC110902-1|AAI10903.1| 630|Homo sapiens poly (ADP-ribose)
polymerase family, member 6 protein.
Length = 630
Score = 34.7 bits (76), Expect(2) = 0.018
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -3
Query: 771 KWKELSKNHNVFYAYHGNRXENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATI 607
+++ K + +A+HG+ EN+++IL GL L G G+YLSP S +
Sbjct: 458 RFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISF 517
Query: 606 PHSHGGFG 583
+S G G
Sbjct: 518 GYSGMGKG 525
Score = 23.4 bits (48), Expect(2) = 0.018
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -3
Query: 558 HLSCVALCEVVDAPE 514
+L+C+ALCEV+ + +
Sbjct: 560 NLNCIALCEVITSKD 574
>BC015314-1|AAH15314.1| 563|Homo sapiens PARP6 protein protein.
Length = 563
Score = 34.7 bits (76), Expect(2) = 0.018
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -3
Query: 771 KWKELSKNHNVFYAYHGNRXENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATI 607
+++ K + +A+HG+ EN+++IL GL L G G+YLSP S +
Sbjct: 391 RFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISF 450
Query: 606 PHSHGGFG 583
+S G G
Sbjct: 451 GYSGMGKG 458
Score = 23.4 bits (48), Expect(2) = 0.018
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -3
Query: 558 HLSCVALCEVVDAPE 514
+L+C+ALCEV+ + +
Sbjct: 493 NLNCIALCEVITSKD 507
>AK024961-1|BAB15044.1| 501|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21308 fis, clone COL02131. ).
Length = 501
Score = 35.1 bits (77), Expect(2) = 0.018
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = -3
Query: 735 YAYHGNRXENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHS 598
+A+HG+ EN+++IL GL N L G+G+YLSP S + +S
Sbjct: 341 FAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 391
Score = 23.0 bits (47), Expect(2) = 0.018
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 558 HLSCVALCEVVDAPE 514
+L C+ALCEV+ + +
Sbjct: 431 NLKCIALCEVITSSD 445
>BC037386-1|AAH37386.1| 494|Homo sapiens PARP8 protein protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = -3
Query: 735 YAYHGNRXENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHS 598
+A+HG+ EN+++IL GL N L G+G+YLSP S + +S
Sbjct: 405 FAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 455
>BC119689-1|AAI19690.1| 554|Homo sapiens PARP6 protein protein.
Length = 554
Score = 34.7 bits (76), Expect = 0.37
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -3
Query: 771 KWKELSKNHNVFYAYHGNRXENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATI 607
+++ K + +A+HG+ EN+++IL GL L G G+YLSP S +
Sbjct: 459 RFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISF 518
Query: 606 PHSHGGFG 583
+S G G
Sbjct: 519 GYSGMGKG 526
>BC119688-1|AAI19689.1| 554|Homo sapiens PARP6 protein protein.
Length = 554
Score = 34.7 bits (76), Expect = 0.37
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -3
Query: 771 KWKELSKNHNVFYAYHGNRXENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATI 607
+++ K + +A+HG+ EN+++IL GL L G G+YLSP S +
Sbjct: 459 RFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISF 518
Query: 606 PHSHGGFG 583
+S G G
Sbjct: 519 GYSGMGKG 526
>D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein.
Length = 1725
Score = 33.5 bits (73), Expect = 0.86
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Frame = -3
Query: 759 LSKNHNVFYAYHGNRXENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 607
LSK NV HG+ +N IL GL + + T +GN G+Y S LS +I
Sbjct: 428 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 487
Query: 606 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEG-DGLYKDGKTDHMRVN 433
+SH G G + L C VAL + +D E ++ + G D ++ G + V
Sbjct: 488 KYSHPGETDGTRLL---LICDVALGKCMDLHEK-DFSLTEAPPGYDSVH--GVSQTASVT 541
Query: 432 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 331
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 542 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 576
>AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose)
polymerase family, member 4 protein.
Length = 1724
Score = 33.5 bits (73), Expect = 0.86
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Frame = -3
Query: 759 LSKNHNVFYAYHGNRXENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 607
LSK NV HG+ +N IL GL + + T +GN G+Y S LS +I
Sbjct: 427 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 486
Query: 606 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEG-DGLYKDGKTDHMRVN 433
+SH G G + L C VAL + +D E ++ + G D ++ G + V
Sbjct: 487 KYSHPGETDGTRLL---LICDVALGKCMDLHEK-DFSLTEAPPGYDSVH--GVSQTASVT 540
Query: 432 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 331
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 541 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 575
>AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein.
Length = 1724
Score = 33.5 bits (73), Expect = 0.86
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Frame = -3
Query: 759 LSKNHNVFYAYHGNRXENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 607
LSK NV HG+ +N IL GL + + T +GN G+Y S LS +I
Sbjct: 427 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 486
Query: 606 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEGDGLYK-DGKTDHMRVN 433
+SH G G + L C VAL + +D E P++ G G + V
Sbjct: 487 KYSHPGETDGTRLL---LICDVALGKCMDLHE---KDFPLTEAPPGYDSVHGVSQTASVT 540
Query: 432 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 331
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 541 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 575
>AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribosyl)
transferase protein.
Length = 1724
Score = 33.5 bits (73), Expect = 0.86
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Frame = -3
Query: 759 LSKNHNVFYAYHGNRXENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 607
LSK NV HG+ +N IL GL + + T +GN G+Y S LS +I
Sbjct: 427 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 486
Query: 606 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEG-DGLYKDGKTDHMRVN 433
+SH G G + L C VAL + +D E ++ + G D ++ G + V
Sbjct: 487 KYSHPGETDGTRLL---LICDVALGKCMDLHEK-DFSLTEAPPGYDSVH--GVSQTASVT 540
Query: 432 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 331
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 541 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 575
>BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase
36, fused homolog (Drosophila) protein.
Length = 1315
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -3
Query: 696 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 565
+ +FG + ++ NT + G +Y+SPEL P+ H W CI
Sbjct: 141 LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCI 189
>AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine
kinase protein.
Length = 1315
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -3
Query: 696 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 565
+ +FG + ++ NT + G +Y+SPEL P+ H W CI
Sbjct: 141 LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCI 189
>AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein.
Length = 1311
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -3
Query: 696 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 565
+ +FG + ++ NT + G +Y+SPEL P+ H W CI
Sbjct: 158 LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCI 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,084,947
Number of Sequences: 237096
Number of extensions: 2628807
Number of successful extensions: 12194
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12184
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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