Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14h08
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 31 3.4
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 31 3.4
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein. 31 3.4
U02330-1|AAA19955.1| 175|Homo sapiens neu differentiation facto... 31 4.5
U02328-1|AAA19953.1| 552|Homo sapiens neu differentiation facto... 31 4.5
U02326-1|AAA19951.1| 462|Homo sapiens neu differentiation facto... 31 4.5
M94168-1|AAA58641.1| 241|Homo sapiens heregulin-beta3 protein. 31 4.5
M94167-1|AAA58640.1| 637|Homo sapiens heregulin-beta2 protein. 31 4.5
M94166-1|AAA58639.1| 645|Homo sapiens heregulin-beta1 protein. 31 4.5
M94165-1|AAA58638.1| 640|Homo sapiens heregulin-alpha protein. 31 4.5
L12261-1|AAB59358.1| 241|Homo sapiens recombinant glial growth ... 31 4.5
EF517296-1|ABR13843.1| 498|Homo sapiens neuregulin 1 type IV fe... 31 4.5
BC006492-1|AAH06492.1| 241|Homo sapiens neuregulin 1 protein. 31 4.5
AF026146-1|AAD01795.1| 211|Homo sapiens heregulin gamma protein. 31 4.5
AF009227-1|AAC51756.1| 768|Homo sapiens gamma-heregulin protein. 31 4.5
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -2
Query: 402 TRDGSSIAIPRYRIQPLGPSIILRNG---SSSNVTFGPTVNCC 283
T+D +S A R++PLGP R G V GPT+ CC
Sbjct: 3166 TKDSTSTAPDSQRLEPLGPGSSGRPGKEPGEPGVLDGPTLPCC 3208
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -2
Query: 402 TRDGSSIAIPRYRIQPLGPSIILRNG---SSSNVTFGPTVNCC 283
T+D +S A R++PLGP R G V GPT+ CC
Sbjct: 3241 TKDSTSTAPDSQRLEPLGPGSSGRPGKEPGEPGVLDGPTLPCC 3283
>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
Length = 1571
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -2
Query: 402 TRDGSSIAIPRYRIQPLGPSIILRNG---SSSNVTFGPTVNCC 283
T+D +S A R++PLGP R G V GPT+ CC
Sbjct: 886 TKDSTSTAPDSQRLEPLGPGSSGRPGKEPGEPGVLDGPTLPCC 928
>U02330-1|AAA19955.1| 175|Homo sapiens neu differentiation factor
protein.
Length = 175
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 34 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 93
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 94 TEGANTSSSTSTSTTGTSHLV 114
>U02328-1|AAA19953.1| 552|Homo sapiens neu differentiation factor
protein.
Length = 552
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 7 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 66
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 67 TEGANTSSSTSTSTTGTSHLV 87
>U02326-1|AAA19951.1| 462|Homo sapiens neu differentiation factor
protein.
Length = 462
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>M94168-1|AAA58641.1| 241|Homo sapiens heregulin-beta3 protein.
Length = 241
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>M94167-1|AAA58640.1| 637|Homo sapiens heregulin-beta2 protein.
Length = 637
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>M94166-1|AAA58639.1| 645|Homo sapiens heregulin-beta1 protein.
Length = 645
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>M94165-1|AAA58638.1| 640|Homo sapiens heregulin-alpha protein.
Length = 640
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>L12261-1|AAB59358.1| 241|Homo sapiens recombinant glial growth
factor protein.
Length = 241
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>EF517296-1|ABR13843.1| 498|Homo sapiens neuregulin 1 type IV fetal
B beta 1a protein.
Length = 498
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 79 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 138
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 139 TEGANTSSSTSTSTTGTSHLV 159
>BC006492-1|AAH06492.1| 241|Homo sapiens neuregulin 1 protein.
Length = 241
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>AF026146-1|AAD01795.1| 211|Homo sapiens heregulin gamma protein.
Length = 211
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 100 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 159
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 160 TEGANTSSSTSTSTTGTSHLV 180
>AF009227-1|AAC51756.1| 768|Homo sapiens gamma-heregulin protein.
Length = 768
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 494 SKRAIFSSTHSSCRVKSKLNNNSKSVYATFVD-NLFRLHVSSATTGIWLKVAR--RVGVA 664
+K ++ S C+V SKL N+S S T V+ N + ++T G ++ R+ V+
Sbjct: 627 NKASLADSGEYMCKVISKLGNDSASANITIVESNEIITGMPASTEGAYVSSESPIRISVS 686
Query: 665 TVTPENRNMAPSETTVTSKLL 727
T + + TT TS L+
Sbjct: 687 TEGANTSSSTSTSTTGTSHLV 707
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,287,783
Number of Sequences: 237096
Number of extensions: 2048412
Number of successful extensions: 7618
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7618
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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