Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14h05
         (292 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0207 - 2219247-2219902,2220203-2221156,2223739-2224897           27   1.9  
05_07_0137 + 27955876-27956000,27957626-27957714,27957963-279580...    25   7.7  

>10_01_0207 - 2219247-2219902,2220203-2221156,2223739-2224897
          Length = 922

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = +1

Query: 58  SAVKKSMADISIGVQLSKYFFRNKMSQKKQMQRN*FYTAKVSEIIQKSN 204
           SAV   +    I   +SKY  R+++S++KQ++R      +VS ++++++
Sbjct: 395 SAVTGELVTRFISYLMSKYSRRHEISEEKQLKRLQQLLLRVSMVVEEAD 443


>05_07_0137 +
           27955876-27956000,27957626-27957714,27957963-27958054,
           27959338-27959419,27960038-27960454,27960539-27960876,
           27961066-27961233
          Length = 436

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -3

Query: 134 DILLRKKYF-DSCTPIDMSAMDFLT 63
           +I   K+YF DSC P+D S +  LT
Sbjct: 340 NIFFTKRYFRDSCLPVDGSYLKDLT 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,878,952
Number of Sequences: 37544
Number of extensions: 81515
Number of successful extensions: 96
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 316296968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)