Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14h04
         (179 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047597-1|AAH47597.1|  317|Homo sapiens C10orf73 protein protein.     29   2.7  
BC029839-1|AAH29839.1|  313|Homo sapiens C10orf73 protein protein.     29   2.7  

>BC047597-1|AAH47597.1|  317|Homo sapiens C10orf73 protein protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -1

Query: 149 DGTT-SHTSDQQIVIVMEVFLNKIISREGA*TRP-PSLDRKSAIIF 18
           DGTT S TS +     +EVF    I REG+  RP P++ R+  + F
Sbjct: 50  DGTTLSLTSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYF 95


>BC029839-1|AAH29839.1|  313|Homo sapiens C10orf73 protein protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -1

Query: 149 DGTT-SHTSDQQIVIVMEVFLNKIISREGA*TRP-PSLDRKSAIIF 18
           DGTT S TS +     +EVF    I REG+  RP P++ R+  + F
Sbjct: 46  DGTTLSLTSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYF 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,689,886
Number of Sequences: 237096
Number of extensions: 445809
Number of successful extensions: 721
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 76,859,062
effective HSP length: 39
effective length of database: 67,612,318
effective search space used: 1352246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)