Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14g16
         (532 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF056618-1|AAF00005.1|  517|Homo sapiens BWSCR2 associated zinc-...    31   1.9  
BC069730-1|AAH69730.1|  336|Homo sapiens ATF7IP2 protein protein.      30   4.4  
BC069713-1|AAH69713.1|  336|Homo sapiens ATF7IP2 protein protein.      30   4.4  
BC069695-1|AAH69695.1|  336|Homo sapiens ATF7IP2 protein protein.      30   4.4  
BC033891-1|AAH33891.1|  681|Homo sapiens activating transcriptio...    30   4.4  
AY560615-1|AAT66299.1|  681|Homo sapiens MBD1-containing chromat...    30   4.4  
AK223492-1|BAD97212.1|  358|Homo sapiens activating transcriptio...    30   4.4  
AK093414-1|BAC04157.1|  543|Homo sapiens protein ( Homo sapiens ...    30   4.4  
AK022730-1|BAB14209.1|  293|Homo sapiens protein ( Homo sapiens ...    30   4.4  
BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein LO...    30   5.8  
BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence si...    30   5.8  
AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of ...    30   5.8  
AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA seq...    30   5.8  
AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens ...    30   5.8  

>AF056618-1|AAF00005.1|  517|Homo sapiens BWSCR2 associated
           zinc-finger protein BAZ2 protein.
          Length = 517

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 19/83 (22%), Positives = 40/83 (48%)
 Frame = -3

Query: 383 FQFGRSRERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNANRRAIAE 204
           +Q G++  R + L+   +  + E   +   E     + +TN  +T+H+ + +A  +A   
Sbjct: 382 YQCGKAFCRSSSLIRHQIIHTGEK-PYKCSECGRFFNRRTN--LTKHQKL-HAEAKACTS 437

Query: 203 DESNVPFNDRDDINEPNIEFGKN 135
           ++    F+  +D N P + FG N
Sbjct: 438 NKCGKAFSKSEDSNNPTLHFGNN 460


>BC069730-1|AAH69730.1|  336|Homo sapiens ATF7IP2 protein protein.
          Length = 336

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 62  DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 106


>BC069713-1|AAH69713.1|  336|Homo sapiens ATF7IP2 protein protein.
          Length = 336

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 62  DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 106


>BC069695-1|AAH69695.1|  336|Homo sapiens ATF7IP2 protein protein.
          Length = 336

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 62  DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 106


>BC033891-1|AAH33891.1|  681|Homo sapiens activating transcription
           factor 7 interacting protein 2 protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 407 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 451


>AY560615-1|AAT66299.1|  681|Homo sapiens MBD1-containing chromatin
           associated factor 2 protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 407 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 451


>AK223492-1|BAD97212.1|  358|Homo sapiens activating transcription
           factor 7 interacting protein 2 variant protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 84  DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 128


>AK093414-1|BAC04157.1|  543|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36095 fis, clone TESTI2020905. ).
          Length = 543

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 408 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 452


>AK022730-1|BAB14209.1|  293|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12668 fis, clone NT2RM4002287. ).
          Length = 293

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 362 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 222
           ++  E VN+ + +S+ N+      P+EK S K N +  Q++SVS +N
Sbjct: 19  DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 63


>BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein
           LOC222584 protein.
          Length = 1011

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = -3

Query: 371 RSRERQAELVNTNVYESTENFH---FNGDEPTEKVSNKTNKNITQHESVSNANRRAIAED 201
           R+R RQ E    ++ +S+++ H    N +E  E+V+ + + + T  +SVS A    + ++
Sbjct: 690 RNRVRQPEKPKEDLLKSSKSMHNVTHNLEEDEEEVTKRNSPSGTTTKSVSIAALLDVNKE 749

Query: 200 ESNVPFNDRDDI 165
           ESN     + ++
Sbjct: 750 ESNKELASKKEV 761


>BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence
           similarity 83, member B protein.
          Length = 1011

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = -3

Query: 371 RSRERQAELVNTNVYESTENFH---FNGDEPTEKVSNKTNKNITQHESVSNANRRAIAED 201
           R+R RQ E    ++ +S+++ H    N +E  E+V+ + + + T  +SVS A    + ++
Sbjct: 690 RNRVRQPEKPKEDLLKSSKSMHNVTHNLEEDEEEVTKRNSPSGTTTKSVSIAALLDVNKE 749

Query: 200 ESNVPFNDRDDI 165
           ESN     + ++
Sbjct: 750 ESNKELASKKEV 761


>AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of the
           gene for a novel proteinA, member 8) protein.
          Length = 1011

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = -3

Query: 371 RSRERQAELVNTNVYESTENFH---FNGDEPTEKVSNKTNKNITQHESVSNANRRAIAED 201
           R+R RQ E    ++ +S+++ H    N +E  E+V+ + + + T  +SVS A    + ++
Sbjct: 690 RNRVRQPEKPKEDLLKSSKSMHNVTHNLEEDEEEVTKRNSPSGTTTKSVSIAALLDVNKE 749

Query: 200 ESNVPFNDRDDI 165
           ESN     + ++
Sbjct: 750 ESNKELASKKEV 761


>AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA
           sequence from clone RP3-523K23 on chromosome 6p12.1-12.3
            Contains the 3' end of the gene for a novel protein.
           ).
          Length = 1011

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = -3

Query: 371 RSRERQAELVNTNVYESTENFH---FNGDEPTEKVSNKTNKNITQHESVSNANRRAIAED 201
           R+R RQ E    ++ +S+++ H    N +E  E+V+ + + + T  +SVS A    + ++
Sbjct: 690 RNRVRQPEKPKEDLLKSSKSMHNVTHNLEEDEEEVTKRNSPSGTTTKSVSIAALLDVNKE 749

Query: 200 ESNVPFNDRDDI 165
           ESN     + ++
Sbjct: 750 ESNKELASKKEV 761


>AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30642 fis, clone CTONG2002965. ).
          Length = 811

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = -3

Query: 371 RSRERQAELVNTNVYESTENFH---FNGDEPTEKVSNKTNKNITQHESVSNANRRAIAED 201
           R+R RQ E    ++ +S+++ H    N +E  E+V+ + + + T  +SVS A    + ++
Sbjct: 690 RNRVRQPEKPKEDLLKSSKSMHNVTHNLEEDEEEVTKRNSPSGTTTKSVSIAALLDVNKE 749

Query: 200 ESNVPFNDRDDI 165
           ESN     + ++
Sbjct: 750 ESNKELASKKEV 761


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,914,143
Number of Sequences: 237096
Number of extensions: 1394863
Number of successful extensions: 3320
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3320
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)