Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14g13
         (812 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M68941-1|AAA36530.1|  926|Homo sapiens protein-tyrosine phophata...    31   5.0  
BC010674-1|AAH10674.1|  926|Homo sapiens protein tyrosine phosph...    31   5.0  
AC104668-1|AAY24016.1|  303|Homo sapiens unknown protein.              31   5.0  
BC035008-1|AAH35008.1|  652|Homo sapiens gametogenetin protein.        31   6.5  
AK093032-1|BAC04025.1|  652|Homo sapiens protein ( Homo sapiens ...    31   6.5  
AF538035-1|AAP31500.1|  652|Homo sapiens gametogenetin protein 1...    31   6.5  

>M68941-1|AAA36530.1|  926|Homo sapiens protein-tyrosine phophatase
           protein.
          Length = 926

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 810 LDESSLPKKSLPCA--HRNXSFXERNQRVSESNIKHSVX*EIISADSVFTLSKRGP 649
           L+  SLP +S P    HRN +F +   R+  S++ H V   + ++ S   +++R P
Sbjct: 383 LETQSLPSRSPPGTPNHRNSTFTQEGTRLRPSSVGHLVDHMVHTSPSEVFVNQRSP 438


>BC010674-1|AAH10674.1|  926|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 4 (megakaryocyte)
           protein.
          Length = 926

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 810 LDESSLPKKSLPCA--HRNXSFXERNQRVSESNIKHSVX*EIISADSVFTLSKRGP 649
           L+  SLP +S P    HRN +F +   R+  S++ H V   + ++ S   +++R P
Sbjct: 383 LETQSLPSRSPPGTPNHRNSTFTQEGTRLRPSSVGHLVDHMVHTSPSEVFVNQRSP 438


>AC104668-1|AAY24016.1|  303|Homo sapiens unknown protein.
          Length = 303

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 810 LDESSLPKKSLPCA--HRNXSFXERNQRVSESNIKHSVX*EIISADSVFTLSKRGP 649
           L+  SLP +S P    HRN +F +   R+  S++ H V   + ++ S   +++R P
Sbjct: 26  LETQSLPSRSPPGTPNHRNSTFTQEGTRLRPSSVGHLVDHMVHTSPSEVFVNQRSP 81


>BC035008-1|AAH35008.1|  652|Homo sapiens gametogenetin protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 737 KGCPSPTSSILSXKRSYQPIPYSHYQNEVPKYD 639
           +GC  P S+  S  R+  P PY+ +    PK+D
Sbjct: 320 EGCSGPPSAPASQARALPPPPYTTFPGSKPKFD 352


>AK093032-1|BAC04025.1|  652|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35713 fis, clone TESTI1000019. ).
          Length = 652

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 737 KGCPSPTSSILSXKRSYQPIPYSHYQNEVPKYD 639
           +GC  P S+  S  R+  P PY+ +    PK+D
Sbjct: 320 EGCSGPPSAPASQARALPPPPYTTFPGSKPKFD 352


>AF538035-1|AAP31500.1|  652|Homo sapiens gametogenetin protein 1a
           protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 737 KGCPSPTSSILSXKRSYQPIPYSHYQNEVPKYD 639
           +GC  P S+  S  R+  P PY+ +    PK+D
Sbjct: 320 EGCSGPPSAPASQARALPPPPYTTFPGSKPKFD 352


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,672,771
Number of Sequences: 237096
Number of extensions: 1753439
Number of successful extensions: 4696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4569
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)