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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14g09
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089443-1|AAL90181.1|  366|Drosophila melanogaster AT26187p pro...    37   0.031
AE014298-1321|AAF46482.2|  366|Drosophila melanogaster CG17440-P...    37   0.031
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot...    36   0.071
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot...    36   0.071
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit...    36   0.071
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit...    36   0.071
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me...    36   0.071
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE...    36   0.071
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC...    36   0.071
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB...    36   0.071
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD...    36   0.071
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA...    36   0.071
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r...    35   0.12 
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,...    35   0.12 
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,...    35   0.12 
AE014298-1322|AAF46483.1|  663|Drosophila melanogaster CG17446-P...    34   0.22 
Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein p...    32   0.87 
AY069276-1|AAL39421.1|  363|Drosophila melanogaster GM10839p pro...    32   0.87 
AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155 pro...    32   0.87 
AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein...    32   0.87 
AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA p...    32   0.87 
AE014297-1323|AAF54658.2|  788|Drosophila melanogaster CG5342-PA...    30   2.7  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    30   2.7  
BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro...    30   3.5  
AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA...    30   3.5  
U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft ...    29   8.1  
AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD2272...    29   8.1  
AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA...    29   8.1  
AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB...    29   8.1  

>AY089443-1|AAL90181.1|  366|Drosophila melanogaster AT26187p
           protein.
          Length = 366

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 237 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 124
           IGCD C  WYH  C   + +D E++  K + C  C  +
Sbjct: 53  IGCDGCEEWYHGDCIEITEKDAEHI--KNYYCRRCKKE 88


>AE014298-1321|AAF46482.2|  366|Drosophila melanogaster CG17440-PA
           protein.
          Length = 366

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 237 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 124
           IGCD C  WYH  C   + +D E++  K + C  C  +
Sbjct: 53  IGCDGCEEWYHGDCIEITEKDAEHI--KNYYCRRCKKE 88


>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
            trxI protein.
          Length = 3358

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1059 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1113

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1114 RNESSKIKAEEW 1125


>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
            trxII protein.
          Length = 3726

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1427 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1481

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1482 RNESSKIKAEEW 1493


>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3358

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1059 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1113

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1114 RNESSKIKAEEW 1125


>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3726

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1427 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1481

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1482 RNESSKIKAEEW 1493


>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
            D.melanogaster zinc-binding protein (trithorax) mRNA,
            complete cds. ).
          Length = 3759

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1427 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1481

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1482 RNESSKIKAEEW 1493


>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
            isoform E protein.
          Length = 3358

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1059 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1113

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1114 RNESSKIKAEEW 1125


>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
            isoform C protein.
          Length = 3358

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1059 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1113

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1114 RNESSKIKAEEW 1125


>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
            isoform B protein.
          Length = 3358

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1059 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1113

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1114 RNESSKIKAEEW 1125


>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
            isoform D protein.
          Length = 3726

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1427 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1481

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1482 RNESSKIKAEEW 1493


>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
            isoform A protein.
          Length = 3726

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -3

Query: 294  CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENV----YNKEFVCPTC-- 133
            C  C ++  ND D+ +++   C +C  W H KC   S E Y  +     + EF+C  C  
Sbjct: 1427 CQRCYDD--NDFDLKMME---CGDCGQWVHSKCEGLSDEQYNLLSTLPESIEFICKKCAR 1481

Query: 132  ---NNK*KADYW 106
               ++K KA+ W
Sbjct: 1482 RNESSKIKAEEW 1493


>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
            remodeling factor largesubunit NURF301 protein.
          Length = 2669

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 124
            I CD C  W+H +C      + E  +  E+VCP C  K
Sbjct: 2511 ICCDKCQDWFHGRCVGILQSEAE--FIDEYVCPECQRK 2546



 Score = 31.9 bits (69), Expect = 0.87
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 133
            +GCD C  W+H  C   + E  + +   EF+C  C
Sbjct: 2455 VGCDLCSNWFHGDCVSITEEASKKL--SEFICIDC 2487


>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
            isoform A protein.
          Length = 2669

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 124
            I CD C  W+H +C      + E  +  E+VCP C  K
Sbjct: 2511 ICCDKCQDWFHGRCVGILQSEAE--FIDEYVCPECQRK 2546



 Score = 31.9 bits (69), Expect = 0.87
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 133
            +GCD C  W+H  C   + E  + +   EF+C  C
Sbjct: 2455 VGCDLCSNWFHGDCVSITEEASKKL--SEFICIDC 2487


>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
            isoform B protein.
          Length = 2649

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 124
            I CD C  W+H +C      + E  +  E+VCP C  K
Sbjct: 2491 ICCDKCQDWFHGRCVGILQSEAE--FIDEYVCPECQRK 2526



 Score = 31.9 bits (69), Expect = 0.87
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 133
            +GCD C  W+H  C   + E  + +   EF+C  C
Sbjct: 2435 VGCDLCSNWFHGDCVSITEEASKKL--SEFICIDC 2467


>AE014298-1322|AAF46483.1|  663|Drosophila melanogaster CG17446-PA
           protein.
          Length = 663

 Score = 33.9 bits (74), Expect = 0.22
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 237 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 124
           IGCD C  WYH  C   + ++ +++  K++ C  C  +
Sbjct: 75  IGCDGCEEWYHGDCIGITEKEAKHI--KQYYCRRCKKE 110


>Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein
            protein.
          Length = 1408

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCT--IFSSEDYENVYNKEFVCPTCNNK 124
            IGCD C AWYH  C    F+ +D     N ++ C  C  K
Sbjct: 1358 IGCDGCDAWYHWICVGITFAPKD-----NDDWFCRVCVTK 1392


>AY069276-1|AAL39421.1|  363|Drosophila melanogaster GM10839p
           protein.
          Length = 363

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 237 IGCDNCLAWYHLKCT--IFSSEDYENVYNKEFVCPTCNNK 124
           IGCD C AWYH  C    F+ +D     N ++ C  C  K
Sbjct: 313 IGCDGCDAWYHWICVGITFAPKD-----NDDWFCRVCVTK 347


>AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155 protein
            protein.
          Length = 1408

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCT--IFSSEDYENVYNKEFVCPTCNNK 124
            IGCD C AWYH  C    F+ +D     N ++ C  C  K
Sbjct: 1358 IGCDGCDAWYHWICVGITFAPKD-----NDDWFCRVCVTK 1392


>AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein
            protein.
          Length = 1406

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCT--IFSSEDYENVYNKEFVCPTCNNK 124
            IGCD C AWYH  C    F+ +D     N ++ C  C  K
Sbjct: 1356 IGCDGCDAWYHWICVGITFAPKD-----NDDWFCRVCVTK 1390


>AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA
            protein.
          Length = 1406

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 237  IGCDNCLAWYHLKCT--IFSSEDYENVYNKEFVCPTCNNK 124
            IGCD C AWYH  C    F+ +D     N ++ C  C  K
Sbjct: 1356 IGCDGCDAWYHWICVGITFAPKD-----NDDWFCRVCVTK 1390


>AE014297-1323|AAF54658.2|  788|Drosophila melanogaster CG5342-PA
           protein.
          Length = 788

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 106 GKTWLTCGEMRLTTGKKCHILFNIDFLYNSNKL 8
           G  W+ C    LT GKKC  L  I  + +S +L
Sbjct: 369 GIAWIYCLRCHLTVGKKCRNLIEIQEVISSKRL 401


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
           protein.
          Length = 3146

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 285 CEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 133
           C  ELT+D    +     CD C AW H+ C      D +N+  +E++C  C
Sbjct: 857 CICELTHDDGYMIC----CDKCSAWQHVDC---MGIDRQNI-PEEYMCELC 899


>BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p
           protein.
          Length = 1169

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 220 TIVTTNIF*DVYICVISQFLFTRI-ASYSVYCACRTFLLTYTF 345
           TI +   F    I +IS F   RI  +YSV+  C TFL   TF
Sbjct: 378 TITSVTDFISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITF 420


>AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA
           protein.
          Length = 1169

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 220 TIVTTNIF*DVYICVISQFLFTRI-ASYSVYCACRTFLLTYTF 345
           TI +   F    I +IS F   RI  +YSV+  C TFL   TF
Sbjct: 378 TITSVTDFISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITF 420


>U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft
           protein protein.
          Length = 1106

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 231 CDNCLAWYHLKCTI-FSSEDYENVYNKEFVCPTCNN 127
           C NC    HLKCTI ++S     V    + CP C N
Sbjct: 402 CRNCYHMLHLKCTITWASSSKSEV---GWRCPACQN 434


>AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD22726
           protein.
          Length = 1106

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 231 CDNCLAWYHLKCTI-FSSEDYENVYNKEFVCPTCNN 127
           C NC    HLKCTI ++S     V    + CP C N
Sbjct: 402 CRNCYHMLHLKCTITWASSSKSEV---GWRCPACQN 434


>AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA,
           isoform A protein.
          Length = 1099

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 231 CDNCLAWYHLKCTI-FSSEDYENVYNKEFVCPTCNN 127
           C NC    HLKCTI ++S     V    + CP C N
Sbjct: 395 CRNCYHMLHLKCTITWASSSKSEV---GWRCPACQN 427


>AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB,
           isoform B protein.
          Length = 1106

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 231 CDNCLAWYHLKCTI-FSSEDYENVYNKEFVCPTCNN 127
           C NC    HLKCTI ++S     V    + CP C N
Sbjct: 402 CRNCYHMLHLKCTITWASSSKSEV---GWRCPACQN 434


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,961,082
Number of Sequences: 53049
Number of extensions: 401682
Number of successful extensions: 1138
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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