Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14g07
         (794 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL355377-7|CAI13810.1|  348|Homo sapiens DnaJ (Hsp40) homolog, s...    48   4e-05
AF088982-1|AAC35860.1|  348|Homo sapiens heat shock protein hsp4...    48   4e-05
AF087870-1|AAM10498.1|  348|Homo sapiens heat shock protein 40 p...    48   4e-05
BC012115-1|AAH12115.1|  386|Homo sapiens DNAJB5 protein protein.       46   2e-04
U40992-1|AAC14483.2|  337|Homo sapiens heat shock protein hsp40 ...    45   3e-04
BC034721-1|AAH34721.1|  337|Homo sapiens DnaJ (Hsp40) homolog, s...    45   3e-04
AB209922-1|BAD93159.1|  344|Homo sapiens DnaJ (Hsp40) homolog, s...    45   3e-04
AY138810-1|AAN15929.1|  316|Homo sapiens testis spermatogenesis ...    44   6e-04
AF516185-1|AAP47195.1|  141|Homo sapiens testis spermatogenesis ...    44   6e-04
D85429-1|BAA12819.1|  340|Homo sapiens heat shock protein 40 pro...    37   0.096
D49547-1|BAA08495.1|  340|Homo sapiens HSP40 protein.                  37   0.096
CR541677-1|CAG46478.1|  340|Homo sapiens DNAJB1 protein.               37   0.096
CR536485-1|CAG38724.1|  340|Homo sapiens DNAJB1 protein.               37   0.096
BC019827-1|AAH19827.1|  340|Homo sapiens DnaJ (Hsp40) homolog, s...    37   0.096
BC002352-1|AAH02352.1|  340|Homo sapiens DnaJ (Hsp40) homolog, s...    37   0.096
X62421-1|CAA44287.1|  339|Homo sapiens homologue to E.coli DnaJ ...    35   0.29 

>AL355377-7|CAI13810.1|  348|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 5 protein.
          Length = 348

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEIFNGH 688
           PFPK PT++GDL+V F ++FP+RLT   ++I   H
Sbjct: 310 PFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQH 344


>AF088982-1|AAC35860.1|  348|Homo sapiens heat shock protein hsp40-3
           protein.
          Length = 348

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEIFNGH 688
           PFPK PT++GDL+V F ++FP+RLT   ++I   H
Sbjct: 310 PFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQH 344


>AF087870-1|AAM10498.1|  348|Homo sapiens heat shock protein 40
           protein.
          Length = 348

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEIFNGH 688
           PFPK PT++GDL+V F ++FP+RLT   ++I   H
Sbjct: 310 PFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQH 344


>BC012115-1|AAH12115.1|  386|Homo sapiens DNAJB5 protein protein.
          Length = 386

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEIFNGHF 685
           PFPK PT++GDL+V F ++FP+RLT   ++I    +
Sbjct: 310 PFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQQY 345


>U40992-1|AAC14483.2|  337|Homo sapiens heat shock protein hsp40
           homolog protein.
          Length = 337

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEIFNGH 688
           PFPK P ++GDLL+ F++ FP+ +++  KE+   H
Sbjct: 299 PFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKH 333


>BC034721-1|AAH34721.1|  337|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 4 protein.
          Length = 337

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEIFNGH 688
           PFPK P ++GDLL+ F++ FP+ +++  KE+   H
Sbjct: 299 PFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKH 333


>AB209922-1|BAD93159.1|  344|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 4 variant protein.
          Length = 344

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEIFNGH 688
           PFPK P ++GDLL+ F++ FP+ +++  KE+   H
Sbjct: 306 PFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKH 340


>AY138810-1|AAN15929.1|  316|Homo sapiens testis spermatogenesis
           apoptosis related gene 6 protein protein.
          Length = 316

 Score = 44.0 bits (99), Expect = 6e-04
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEI 700
           P P++PT+KGDL + FDI+FP RLT   K++
Sbjct: 279 PLPEDPTKKGDLFIFFDIQFPTRLTPQKKQM 309


>AF516185-1|AAP47195.1|  141|Homo sapiens testis spermatogenesis
           apoptosis-related gene 5 protein protein.
          Length = 141

 Score = 44.0 bits (99), Expect = 6e-04
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERLTTGVKEI 700
           P P++PT+KGDL + FDI+FP RLT   K++
Sbjct: 104 PLPEDPTKKGDLFIFFDIQFPTRLTPQKKQM 134


>D85429-1|BAA12819.1|  340|Homo sapiens heat shock protein 40
           protein.
          Length = 340

 Score = 36.7 bits (81), Expect = 0.096
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERL 721
           P PK P ++GDL++ F++ FPER+
Sbjct: 303 PLPKTPEKRGDLIIEFEVIFPERI 326


>D49547-1|BAA08495.1|  340|Homo sapiens HSP40 protein.
          Length = 340

 Score = 36.7 bits (81), Expect = 0.096
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERL 721
           P PK P ++GDL++ F++ FPER+
Sbjct: 303 PLPKTPEKRGDLIIEFEVIFPERI 326


>CR541677-1|CAG46478.1|  340|Homo sapiens DNAJB1 protein.
          Length = 340

 Score = 36.7 bits (81), Expect = 0.096
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERL 721
           P PK P ++GDL++ F++ FPER+
Sbjct: 303 PLPKTPEKRGDLIIEFEVIFPERI 326


>CR536485-1|CAG38724.1|  340|Homo sapiens DNAJB1 protein.
          Length = 340

 Score = 36.7 bits (81), Expect = 0.096
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERL 721
           P PK P ++GDL++ F++ FPER+
Sbjct: 303 PLPKTPEKRGDLIIEFEVIFPERI 326


>BC019827-1|AAH19827.1|  340|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 1 protein.
          Length = 340

 Score = 36.7 bits (81), Expect = 0.096
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERL 721
           P PK P ++GDL++ F++ FPER+
Sbjct: 303 PLPKTPEKRGDLIIEFEVIFPERI 326


>BC002352-1|AAH02352.1|  340|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 1 protein.
          Length = 340

 Score = 36.7 bits (81), Expect = 0.096
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERL 721
           P PK P ++GDL++ F++ FPER+
Sbjct: 303 PLPKTPEKRGDLIIEFEVIFPERI 326


>X62421-1|CAA44287.1|  339|Homo sapiens homologue to E.coli DnaJ
           protein protein.
          Length = 339

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 792 PFPKEPTRKGDLLVAFDIKFPERL 721
           P PK P ++GDL++ F+  FPER+
Sbjct: 302 PLPKTPEKRGDLIIEFEAIFPERI 325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,533,807
Number of Sequences: 237096
Number of extensions: 2237146
Number of successful extensions: 7052
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7052
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)