Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14g03
(783 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029274-1|ABK30911.1| 336|Drosophila melanogaster IP09655p pro... 88 1e-17
AY119152-1|AAM51012.1| 336|Drosophila melanogaster RE60471p pro... 88 1e-17
AE014297-2468|AAF55516.1| 336|Drosophila melanogaster CG7998-PA... 88 1e-17
AY075238-1|AAL68105.1| 349|Drosophila melanogaster AT19883p pro... 82 7e-16
AE014296-2222|AAF49863.1| 349|Drosophila melanogaster CG10748-P... 82 7e-16
AY089402-1|AAL90140.1| 347|Drosophila melanogaster AT22817p pro... 69 7e-12
AE014296-2223|AAF49862.1| 347|Drosophila melanogaster CG10749-P... 69 7e-12
X73975-1|CAA52155.1| 1146|Drosophila melanogaster integrin protein. 29 5.4
AY075338-1|AAL68203.1| 1049|Drosophila melanogaster GH14509p pro... 29 5.4
AE014298-1867|AAN09652.1| 1049|Drosophila melanogaster CG1771-PA... 29 5.4
AE014298-1866|AAF48242.2| 1146|Drosophila melanogaster CG1771-PB... 29 5.4
AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-P... 29 9.5
>BT029274-1|ABK30911.1| 336|Drosophila melanogaster IP09655p
protein.
Length = 336
Score = 88.2 bits (209), Expect = 1e-17
Identities = 46/137 (33%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Frame = -1
Query: 750 VPVIGGHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGC-IPNLSVAY 574
+PVIGGHS TI+P+LSQ++P + + +E+ T++++ + KAK G LS+AY
Sbjct: 194 IPVIGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAY 253
Query: 573 SSFLFTKSILDALEGSPAKIH-AFVDNNDFGTSYFSSLVNLDKNGVKEMVRYSEFSKFEC 397
+ F S+L L G I ++V + ++FS+ + L KNGV+E + + + +E
Sbjct: 254 AGARFAGSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEK 313
Query: 396 DLIEKSLQQLRKDVSKG 346
L+E ++ +L+K++ KG
Sbjct: 314 KLLEAAIPELKKNIQKG 330
>AY119152-1|AAM51012.1| 336|Drosophila melanogaster RE60471p
protein.
Length = 336
Score = 88.2 bits (209), Expect = 1e-17
Identities = 46/137 (33%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Frame = -1
Query: 750 VPVIGGHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGC-IPNLSVAY 574
+PVIGGHS TI+P+LSQ++P + + +E+ T++++ + KAK G LS+AY
Sbjct: 194 IPVIGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAY 253
Query: 573 SSFLFTKSILDALEGSPAKIH-AFVDNNDFGTSYFSSLVNLDKNGVKEMVRYSEFSKFEC 397
+ F S+L L G I ++V + ++FS+ + L KNGV+E + + + +E
Sbjct: 254 AGARFAGSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEK 313
Query: 396 DLIEKSLQQLRKDVSKG 346
L+E ++ +L+K++ KG
Sbjct: 314 KLLEAAIPELKKNIQKG 330
>AE014297-2468|AAF55516.1| 336|Drosophila melanogaster CG7998-PA
protein.
Length = 336
Score = 88.2 bits (209), Expect = 1e-17
Identities = 46/137 (33%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Frame = -1
Query: 750 VPVIGGHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGC-IPNLSVAY 574
+PVIGGHS TI+P+LSQ++P + + +E+ T++++ + KAK G LS+AY
Sbjct: 194 IPVIGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAY 253
Query: 573 SSFLFTKSILDALEGSPAKIH-AFVDNNDFGTSYFSSLVNLDKNGVKEMVRYSEFSKFEC 397
+ F S+L L G I ++V + ++FS+ + L KNGV+E + + + +E
Sbjct: 254 AGARFAGSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEK 313
Query: 396 DLIEKSLQQLRKDVSKG 346
L+E ++ +L+K++ KG
Sbjct: 314 KLLEAAIPELKKNIQKG 330
>AY075238-1|AAL68105.1| 349|Drosophila melanogaster AT19883p
protein.
Length = 349
Score = 82.2 bits (194), Expect = 7e-16
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Frame = -1
Query: 774 NLKANDCYVPVIGGHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRG-C 598
N+ +D +PVIGGH+ TI+PL+SQ +P ++++ T +++ + AK G
Sbjct: 184 NISPDDVNIPVIGGHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKG 243
Query: 597 IPNLSVAYSSFLFTKSILDALEGSPAKIH-AFVDNNDFGTSYFSSLVNLDKNGVKEMVRY 421
LS+AY+ F S+L + G I AFV + +F+S + L K+G+K +
Sbjct: 244 SATLSMAYAGATFVNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPL 303
Query: 420 SEFSKFECDLIEKSLQQLRKDVSKG 346
+ S +E + +EK L LR++ +G
Sbjct: 304 PQMSDYEKEALEKLLPILRQNADEG 328
>AE014296-2222|AAF49863.1| 349|Drosophila melanogaster CG10748-PA
protein.
Length = 349
Score = 82.2 bits (194), Expect = 7e-16
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Frame = -1
Query: 774 NLKANDCYVPVIGGHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRG-C 598
N+ +D +PVIGGH+ TI+PL+SQ +P ++++ T +++ + AK G
Sbjct: 184 NISPDDVNIPVIGGHAGITILPLISQCQPIYRCDLQEIQNLTHRIQEAGTEVVNAKAGKG 243
Query: 597 IPNLSVAYSSFLFTKSILDALEGSPAKIH-AFVDNNDFGTSYFSSLVNLDKNGVKEMVRY 421
LS+AY+ F S+L + G I AFV + +F+S + L K+G+K +
Sbjct: 244 SATLSMAYAGATFVNSLLRGIAGQDGLIECAFVASKLTDAPFFASPLELGKDGIKRYIPL 303
Query: 420 SEFSKFECDLIEKSLQQLRKDVSKG 346
+ S +E + +EK L LR++ +G
Sbjct: 304 PQMSDYEKEALEKLLPILRQNADEG 328
>AY089402-1|AAL90140.1| 347|Drosophila melanogaster AT22817p
protein.
Length = 347
Score = 68.9 bits (161), Expect = 7e-12
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = -1
Query: 774 NLKANDCYVPVIGGHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGC- 598
N+ +PVIGGH+ +TI+P+LSQ P + +K+ E +++N + AK G
Sbjct: 189 NVDPQKVNIPVIGGHTGRTILPILSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDGLG 248
Query: 597 IPNLSVAYSSFLFTKSILDALEGSPAKI---HAFVDNNDFGTSYFSSLVNLDKNGVKEMV 427
LS+A+++ F S++ ++GS + A+V+++ +F++ + L GVKE
Sbjct: 249 SATLSMAFAATQFVNSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILGPQGVKENT 308
Query: 426 RYSEFSKFECDLIEKSLQQLRKDVSKGRKILE 331
+ E + L L++ ++KG K+ E
Sbjct: 309 GLPDLDDEERKALNGMLPILKESIAKGIKLGE 340
>AE014296-2223|AAF49862.1| 347|Drosophila melanogaster CG10749-PA
protein.
Length = 347
Score = 68.9 bits (161), Expect = 7e-12
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = -1
Query: 774 NLKANDCYVPVIGGHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGC- 598
N+ +PVIGGH+ +TI+P+LSQ P + +K+ E +++N + AK G
Sbjct: 189 NVDPQKVNIPVIGGHTGRTILPILSQCDPPFKGTDKEREALIQRIQNAGTEVVNAKDGLG 248
Query: 597 IPNLSVAYSSFLFTKSILDALEGSPAKI---HAFVDNNDFGTSYFSSLVNLDKNGVKEMV 427
LS+A+++ F S++ ++GS + A+V+++ +F++ + L GVKE
Sbjct: 249 SATLSMAFAATQFVSSLIKGIKGSKDECIVECAYVESDVTEAQFFATPLILGPQGVKENT 308
Query: 426 RYSEFSKFECDLIEKSLQQLRKDVSKGRKILE 331
+ E + L L++ ++KG K+ E
Sbjct: 309 GLPDLDDEERKALNGMLPILKESIAKGIKLGE 340
>X73975-1|CAA52155.1| 1146|Drosophila melanogaster integrin protein.
Length = 1146
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 549 ILDALEGSPAKIHAFVDNNDFGTSYFSSLVNLDKNG 442
I D +P +H+ +D FG+S+ L D NG
Sbjct: 297 IFDKSTDNPIPVHSILDGEQFGSSFGYELATADING 332
>AY075338-1|AAL68203.1| 1049|Drosophila melanogaster GH14509p
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 549 ILDALEGSPAKIHAFVDNNDFGTSYFSSLVNLDKNG 442
I D +P +H+ +D FG+S+ L D NG
Sbjct: 200 IFDKSTDNPIPVHSILDGEQFGSSFGYELATADING 235
>AE014298-1867|AAN09652.1| 1049|Drosophila melanogaster CG1771-PA,
isoform A protein.
Length = 1049
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 549 ILDALEGSPAKIHAFVDNNDFGTSYFSSLVNLDKNG 442
I D +P +H+ +D FG+S+ L D NG
Sbjct: 200 IFDKSTDNPIPVHSILDGEQFGSSFGYELATADING 235
>AE014298-1866|AAF48242.2| 1146|Drosophila melanogaster CG1771-PB,
isoform B protein.
Length = 1146
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 549 ILDALEGSPAKIHAFVDNNDFGTSYFSSLVNLDKNG 442
I D +P +H+ +D FG+S+ L D NG
Sbjct: 297 IFDKSTDNPIPVHSILDGEQFGSSFGYELATADING 332
>AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-PA
protein.
Length = 1067
Score = 28.7 bits (61), Expect = 9.5
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +2
Query: 293 DFHFYQKMSIYASSNIFLPLDTSFRNCCKLFSIKSHSNFENSEYLTISLTPFLSRFTR 466
DF +K+ I + NIF D S+ FSIK H E Y T++L L +F R
Sbjct: 903 DFRELRKLLIERNLNIFAENDASYYITNGYFSIK-HIALELHTYNTMALQCKLMKFCR 959
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,916,825
Number of Sequences: 53049
Number of extensions: 537963
Number of successful extensions: 1202
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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