Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14f24
(344 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 25 0.25
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 2.3
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 22 2.3
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 3.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 7.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 7.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 7.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 7.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 7.2
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 9.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 20 9.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 9.5
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 20 9.5
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 20 9.5
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 25.0 bits (52), Expect = 0.25
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 98 KLPWFQYQGSDSYNCTHYSKRY 163
K PWF SD NC H ++
Sbjct: 170 KDPWFPRHASDLDNCNHLMTKF 191
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 2.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 288 KLKNNCF*QIS*SQKCSDCPLEK 220
K NNC + +KC +C L+K
Sbjct: 224 KYGNNCEIDMYMRRKCQECRLKK 246
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 21.8 bits (44), Expect = 2.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 288 KLKNNCF*QIS*SQKCSDCPLEK 220
K NNC + +KC +C L+K
Sbjct: 21 KYGNNCEIDMYMRRKCQECRLKK 43
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 3.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 245 FCD*LIC*KQLFFNFIYIALENKW 316
F D L+ + F+ IY LEN+W
Sbjct: 89 FADCLVGLVVMPFSAIYEVLENRW 112
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = +2
Query: 110 FQYQGSDSYNCTHYSKRYY 166
+ Y +YN +Y+K+ Y
Sbjct: 98 YNYNNKYNYNNNNYNKKLY 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 332 NNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 128 DSYNCTHYSKRYYAIDSV 181
++YN +Y+K YY I+ +
Sbjct: 332 NNYNKHNYNKLYYNINYI 349
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 90 PTENYHGSSTKGAILI 137
PT YH S K AI +
Sbjct: 259 PTSPYHVSDHKAAITV 274
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.8 bits (39), Expect = 9.5
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -3
Query: 249 QKCSDCPLEK 220
Q+C++CP+ K
Sbjct: 260 QECTECPIGK 269
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 134 YNCTHYSKRYYAIDSV 181
YN +Y K YY I+ +
Sbjct: 318 YNNNNYKKLYYNINYI 333
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 305 LMQYR*N*KIIVSSKLVNRKN 243
L+ + N I+ SKLVN++N
Sbjct: 506 LINFSKNNTIVDISKLVNKRN 526
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 117 YWNHGSFQ*ADSAVCSDMI 61
+W++GS Q A S CS +
Sbjct: 405 WWDNGSNQIAFSRGCSGFV 423
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,930
Number of Sequences: 438
Number of extensions: 1521
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7812315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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