Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14f18
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006525-1|AAH06525.1|  261|Homo sapiens pyridoxamine 5'-phospha...   209   7e-54
AK001397-1|BAA91668.1|  261|Homo sapiens protein ( Homo sapiens ...   209   7e-54
AF468030-1|AAM76918.1|  261|Homo sapiens pyridoxine-5'-phosphate...   209   7e-54
AK223242-1|BAD96962.1|  261|Homo sapiens pyridoxine 5'-phosphate...   206   5e-53
BC108280-1|AAI08281.1|  896|Homo sapiens echinoderm microtubule ...    30   6.2  
AK128679-1|BAC87566.1|  780|Homo sapiens protein ( Homo sapiens ...    30   6.2  
AK093146-1|BAC04073.1|  889|Homo sapiens protein ( Homo sapiens ...    30   6.2  

>BC006525-1|AAH06525.1|  261|Homo sapiens pyridoxamine 5'-phosphate
           oxidase protein.
          Length = 261

 Score =  209 bits (510), Expect = 7e-54
 Identities = 97/190 (51%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
 Frame = -2

Query: 642 EILEPNAMCLXTVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYW 463
           +I E NAMCL T +++G PSAR +L KG+GK+GF+F+TN+ S+K K+++ NP  +  FYW
Sbjct: 74  DIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYW 133

Query: 462 EILNRSVRIEGRVEKLSEDDSTKYFHTRPVVSQIAACASYQSTPIESRDVLCEREKLLEQ 283
           E LNR VR+EG V+KL E+++  YFH+RP  SQI A  S+QS+ I  R+ L ++ + LEQ
Sbjct: 134 EPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQ 193

Query: 282 QYMIPGKEVPKPSYWGGYLLIPRSVEFWQGQRDRLHDRIKFRRP-NKGEVSDERLLHEGE 106
            Y    +EVPKP  WGGY+L P+ +EFWQGQ +RLHDRI FRR    G+     + H GE
Sbjct: 194 LYQ--DQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGE 251

Query: 105 DGWVFERLSP 76
           + W++ERL+P
Sbjct: 252 EDWLYERLAP 261


>AK001397-1|BAA91668.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10535 fis, clone NT2RP2001070, weakly similar to
           PUTATIVE PYRIDOXAMINE 5'-PHOSPHATE OXIDASE (EC 1.4.3.5).
           ).
          Length = 261

 Score =  209 bits (510), Expect = 7e-54
 Identities = 97/190 (51%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
 Frame = -2

Query: 642 EILEPNAMCLXTVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYW 463
           +I E NAMCL T +++G PSAR +L KG+GK+GF+F+TN+ S+K K+++ NP  +  FYW
Sbjct: 74  DIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYW 133

Query: 462 EILNRSVRIEGRVEKLSEDDSTKYFHTRPVVSQIAACASYQSTPIESRDVLCEREKLLEQ 283
           E LNR VR+EG V+KL E+++  YFH+RP  SQI A  S+QS+ I  R+ L ++ + LEQ
Sbjct: 134 EPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQ 193

Query: 282 QYMIPGKEVPKPSYWGGYLLIPRSVEFWQGQRDRLHDRIKFRRP-NKGEVSDERLLHEGE 106
            Y    +EVPKP  WGGY+L P+ +EFWQGQ +RLHDRI FRR    G+     + H GE
Sbjct: 194 LYQ--DQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGE 251

Query: 105 DGWVFERLSP 76
           + W++ERL+P
Sbjct: 252 EDWLYERLAP 261


>AF468030-1|AAM76918.1|  261|Homo sapiens pyridoxine-5'-phosphate
           oxidase protein.
          Length = 261

 Score =  209 bits (510), Expect = 7e-54
 Identities = 97/190 (51%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
 Frame = -2

Query: 642 EILEPNAMCLXTVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYW 463
           +I E NAMCL T +++G PSAR +L KG+GK+GF+F+TN+ S+K K+++ NP  +  FYW
Sbjct: 74  DIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYW 133

Query: 462 EILNRSVRIEGRVEKLSEDDSTKYFHTRPVVSQIAACASYQSTPIESRDVLCEREKLLEQ 283
           E LNR VR+EG V+KL E+++  YFH+RP  SQI A  S+QS+ I  R+ L ++ + LEQ
Sbjct: 134 EPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQ 193

Query: 282 QYMIPGKEVPKPSYWGGYLLIPRSVEFWQGQRDRLHDRIKFRRP-NKGEVSDERLLHEGE 106
            Y    +EVPKP  WGGY+L P+ +EFWQGQ +RLHDRI FRR    G+     + H GE
Sbjct: 194 LYQ--DQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGE 251

Query: 105 DGWVFERLSP 76
           + W++ERL+P
Sbjct: 252 EDWLYERLAP 261


>AK223242-1|BAD96962.1|  261|Homo sapiens pyridoxine 5'-phosphate
           oxidase variant protein.
          Length = 261

 Score =  206 bits (503), Expect = 5e-53
 Identities = 96/190 (50%), Positives = 134/190 (70%), Gaps = 1/190 (0%)
 Frame = -2

Query: 642 EILEPNAMCLXTVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYW 463
           +I E NAMCL T +++G PSAR +L KG+GK+GF+F+TN+ S+K K+++ NP  +  FYW
Sbjct: 74  DIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYW 133

Query: 462 EILNRSVRIEGRVEKLSEDDSTKYFHTRPVVSQIAACASYQSTPIESRDVLCEREKLLEQ 283
           E LNR VR+ G V+KL E+++  YFH+RP  SQI A  S+QS+ I  R+ L ++ + LEQ
Sbjct: 134 EPLNRQVRVGGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQ 193

Query: 282 QYMIPGKEVPKPSYWGGYLLIPRSVEFWQGQRDRLHDRIKFRRP-NKGEVSDERLLHEGE 106
            Y    +EVPKP  WGGY+L P+ +EFWQGQ +RLHDRI FRR    G+     + H GE
Sbjct: 194 LYQ--DQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGE 251

Query: 105 DGWVFERLSP 76
           + W++ERL+P
Sbjct: 252 EDWLYERLAP 261


>BC108280-1|AAI08281.1|  896|Homo sapiens echinoderm microtubule
           associated protein like 3 protein.
          Length = 896

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = -2

Query: 627 NAMCLXTVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNR 448
           N + + +VS +G  S+RF  C G+    F  + ++ SK    I  N       YW++   
Sbjct: 702 NVIYIYSVSSDGAKSSRFGRCMGH--SSFITHLDW-SKDGNFIMSNSGDYEILYWDVAGG 758

Query: 447 SVRIEGRVEKLSEDDST 397
             +++ R E    + +T
Sbjct: 759 CKQLKNRYESRDREWAT 775


>AK128679-1|BAC87566.1|  780|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46843 fis, clone UTERU3001029, moderately
           similar to Echinoderm microtubule-associated protein. ).
          Length = 780

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = -2

Query: 627 NAMCLXTVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNR 448
           N + + +VS +G  S+RF  C G+    F  + ++ SK    I  N       YW++   
Sbjct: 586 NVIYIYSVSSDGAKSSRFGRCMGH--SSFITHLDW-SKDGNFIMSNSGDYEILYWDVAGG 642

Query: 447 SVRIEGRVEKLSEDDST 397
             +++ R E    + +T
Sbjct: 643 CKQLKNRYESRDREWAT 659


>AK093146-1|BAC04073.1|  889|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35827 fis, clone TESTI2006453, weakly similar to
           Microtubule-associated protein like echinoderm EMAP. ).
          Length = 889

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = -2

Query: 627 NAMCLXTVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNR 448
           N + + +VS +G  S+RF  C G+    F  + ++ SK    I  N       YW++   
Sbjct: 674 NVIYIYSVSSDGAKSSRFGRCMGH--SSFITHLDW-SKDGNFIMSNSGDYEILYWDVAGG 730

Query: 447 SVRIEGRVEKLSEDDST 397
             +++ R E    + +T
Sbjct: 731 CKQLKNRYESRDREWAT 747


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,749,645
Number of Sequences: 237096
Number of extensions: 2146432
Number of successful extensions: 4288
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4280
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)