Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14f12
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   186   2e-49
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   1.4  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   1.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   1.9  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    22   7.7  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  186 bits (454), Expect = 2e-49
 Identities = 90/104 (86%), Positives = 97/104 (93%)
 Frame = -2

Query: 324 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 145
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76

Query: 144 ERERRDNYVPEVSALEHDIXEVDPDTKDMLKMLDFNNINGLQLT 13
           ERERRDNYVP+VSALE DI EVDP+TK+MLK LDFNNI  +QLT
Sbjct: 77  ERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLT 119


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 93  DIXEVDPDTKDMLKMLDFNNINGLQLTTAS 4
           DI +VDPD    L  +  NNI G+  +T S
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGIIDSTFS 665


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -2

Query: 171 GISIKLQEEERERRDNYVPEVSALE-HDIXEVDPDTKDMLKMLDFNNINGLQLTT 10
           G + +L+EEE + +  + PE+   E  +  +V  + K+M+ + D +N    Q TT
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-LQDISNQPKQQSTT 140


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 194 VSDTRKCEESLSNFRKRSVRGVTTMSQKCLLSNMTS 87
           +++TR C E++S F+    R   T+ +K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 135 RRDNYVPEVSALEHDIXEVDPDTKDMLKMLDFNNI 31
           R D Y   ++ L H    V  D   ++  LDF NI
Sbjct: 208 RSDGYQLGITVLSHVNSSVFMDIPAIINYLDFVNI 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,978
Number of Sequences: 2352
Number of extensions: 7172
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)