Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14f08
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094839-1|AAH94839.1|  352|Homo sapiens ADP-ribosylation-like f...    99   4e-21
BC015909-1|AAH15909.2|  360|Homo sapiens ADP-ribosylation-like f...    99   4e-21
BC001958-1|AAH01958.1|  218|Homo sapiens ARL6IP4 protein protein.      99   4e-21
AB035384-1|BAA94744.1|  218|Homo sapiens SRp25 nuclear protein p...    99   4e-21
BC015569-1|AAH15569.1|  215|Homo sapiens ARL6IP4 protein protein.      89   7e-18
AK074098-1|BAB84924.1|  432|Homo sapiens FLJ00169 protein protein.     89   7e-18
DQ099385-1|AAZ13761.1|  181|Homo sapiens ADP-ribosylation-like f...    86   5e-17

>BC094839-1|AAH94839.1|  352|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 352

 Score =   99 bits (238), Expect = 4e-21
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -2

Query: 471 KAMXPMSKEEWEKXQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 292
           +AM PM+KEEW+  QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D 
Sbjct: 282 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 341

Query: 291 ALFQ 280
             FQ
Sbjct: 342 LAFQ 345


>BC015909-1|AAH15909.2|  360|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 360

 Score =   99 bits (238), Expect = 4e-21
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -2

Query: 471 KAMXPMSKEEWEKXQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 292
           +AM PM+KEEW+  QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D 
Sbjct: 290 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 349

Query: 291 ALFQ 280
             FQ
Sbjct: 350 LAFQ 353


>BC001958-1|AAH01958.1|  218|Homo sapiens ARL6IP4 protein protein.
          Length = 218

 Score =   99 bits (238), Expect = 4e-21
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -2

Query: 471 KAMXPMSKEEWEKXQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 292
           +AM PM+KEEW+  QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D 
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 207

Query: 291 ALFQ 280
             FQ
Sbjct: 208 LAFQ 211


>AB035384-1|BAA94744.1|  218|Homo sapiens SRp25 nuclear protein
           protein.
          Length = 218

 Score =   99 bits (238), Expect = 4e-21
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -2

Query: 471 KAMXPMSKEEWEKXQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 292
           +AM PM+KEEW+  QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D 
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 207

Query: 291 ALFQ 280
             FQ
Sbjct: 208 LAFQ 211


>BC015569-1|AAH15569.1|  215|Homo sapiens ARL6IP4 protein protein.
          Length = 215

 Score = 89.0 bits (211), Expect = 7e-18
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = -2

Query: 471 KAMXPMSKEEWEKXQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINR 313
           +AM PM+KEEW+  QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINK 200


>AK074098-1|BAB84924.1|  432|Homo sapiens FLJ00169 protein protein.
          Length = 432

 Score = 89.0 bits (211), Expect = 7e-18
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = -2

Query: 471 KAMXPMSKEEWEKXQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINR 313
           +AM PM+KEEW+  QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+
Sbjct: 365 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINK 417


>DQ099385-1|AAZ13761.1|  181|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 181

 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 42/64 (65%), Positives = 50/64 (78%)
 Frame = -2

Query: 471 KAMXPMSKEEWEKXQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 292
           K +    KE+ E  QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D 
Sbjct: 111 KKLKKKGKEKAEAQQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 170

Query: 291 ALFQ 280
             FQ
Sbjct: 171 LAFQ 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,591,345
Number of Sequences: 237096
Number of extensions: 1192718
Number of successful extensions: 1803
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)