Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14f07
(704 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 206 7e-55
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 206 7e-55
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 206 7e-55
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 26 1.3
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 23 9.4
EF588455-1|ABQ96691.1| 177|Anopheles gambiae transposase protein. 23 9.4
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 9.4
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 23 9.4
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 206 bits (502), Expect = 7e-55
Identities = 90/142 (63%), Positives = 114/142 (80%)
Frame = -1
Query: 701 AAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSD 522
+ V YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D
Sbjct: 140 SGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCND 199
Query: 521 KLDCGVSMKWTAGSADTLFGVGAKYALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLS 342
+L+ V + W +GS T FG+GAKY LD+DA + AK+NN+S IGLGYQQKLR G+TLTLS
Sbjct: 200 RLETAVQLSWASGSNATKFGMGAKYDLDKDACVRAKVNNQSQIGLGYQQKLRDGITLTLS 259
Query: 341 AAIDGQNFNAGGHKVGVALELE 276
+DG+NFNAGGHK+GVALELE
Sbjct: 260 TLVDGKNFNAGGHKIGVALELE 281
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 206 bits (502), Expect = 7e-55
Identities = 90/142 (63%), Positives = 114/142 (80%)
Frame = -1
Query: 701 AAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSD 522
+ V YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D
Sbjct: 140 SGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCND 199
Query: 521 KLDCGVSMKWTAGSADTLFGVGAKYALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLS 342
+L+ V + W +GS T FG+GAKY LD+DA + AK+NN+S IGLGYQQKLR G+TLTLS
Sbjct: 200 RLETAVQLSWASGSNATKFGMGAKYDLDKDACVRAKVNNQSQIGLGYQQKLRDGITLTLS 259
Query: 341 AAIDGQNFNAGGHKVGVALELE 276
+DG+NFNAGGHK+GVALELE
Sbjct: 260 TLVDGKNFNAGGHKIGVALELE 281
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 206 bits (502), Expect = 7e-55
Identities = 90/142 (63%), Positives = 114/142 (80%)
Frame = -1
Query: 701 AAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSD 522
+ V YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D
Sbjct: 140 SGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCND 199
Query: 521 KLDCGVSMKWTAGSADTLFGVGAKYALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLS 342
+L+ V + W +GS T FG+GAKY LD+DA + AK+NN+S IGLGYQQKLR G+TLTLS
Sbjct: 200 RLETAVQLSWASGSNATKFGMGAKYDLDKDACVRAKVNNQSQIGLGYQQKLRDGITLTLS 259
Query: 341 AAIDGQNFNAGGHKVGVALELE 276
+DG+NFNAGGHK+GVALELE
Sbjct: 260 TLVDGKNFNAGGHKIGVALELE 281
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 25.8 bits (54), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -3
Query: 513 LRRQHEVDGGFGRHI----IRSWSEVRAGPRRVSARQDQQQVPH 394
L+R + +DG FGR I S ++ +++ AR++QQ+ H
Sbjct: 971 LKRSNTMDGSFGRQFSNEGISGQSWLQLQQQKLRARREQQRREH 1014
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 23.0 bits (47), Expect = 9.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 683 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 540
+GW +G+ QF ++ + GYQ D V++G F S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653
>EF588455-1|ABQ96691.1| 177|Anopheles gambiae transposase protein.
Length = 177
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 612 SKVVLGELCFLCIKLGVYTSQPT 680
S V G CF C+K+ YT T
Sbjct: 17 SPVETGAKCFYCLKVFKYTKGTT 39
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.0 bits (47), Expect = 9.4
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = +2
Query: 593 HQIGNLEQSCSWRTLLFVYQTGCVHQPANPG 685
H+ + + W ++F+Y C+ + + PG
Sbjct: 335 HRNADTHEMSDWVRVIFLYWLPCILRMSRPG 365
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 9.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 683 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 540
+GW +G+ QF ++ + GYQ D V++G F S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,877
Number of Sequences: 2352
Number of extensions: 18222
Number of successful extensions: 245
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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