Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14f06
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 408 e-114
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 405 e-113
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 405 e-113
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 400 e-112
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 398 e-111
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 396 e-110
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 209 1e-54
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 209 1e-54
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 161 6e-40
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 161 6e-40
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 161 6e-40
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 161 6e-40
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 160 7e-40
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 160 7e-40
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 160 7e-40
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 160 7e-40
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 158 3e-39
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 158 3e-39
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 158 3e-39
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 157 7e-39
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 156 2e-38
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 153 1e-37
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 153 1e-37
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 144 5e-35
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 5e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 41 0.001
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 41 0.001
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 32 0.44
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 31 1.0
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 30 1.8
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 29 3.1
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 28 7.1
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 28 7.1
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 27 9.4
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 27 9.4
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 408 bits (1004), Expect = e-114
Identities = 186/195 (95%), Positives = 195/195 (100%)
Frame = -2
Query: 677 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQ 498
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSRGSQQYR+LTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQ 291
Query: 497 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKT 318
QMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQM+N+QNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 317 AVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 138
AVCDIPPRG+KM+ATF+GNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 137 ESNMNDLVSEYQQYQ 93
ESNMNDLVSEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 405 bits (997), Expect = e-113
Identities = 186/196 (94%), Positives = 193/196 (98%)
Frame = -2
Query: 680 ATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELT 501
ATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSR +QQYRA+TVPELT
Sbjct: 231 ATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELT 290
Query: 500 QQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVK 321
QQ FDAKNMMAACDPRHGRYLT AA+FRGRMSMKEVDEQM+NIQNKNSSYFV+WIPNNVK
Sbjct: 291 QQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVK 350
Query: 320 TAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 141
TAVCDIPPRGLKMSATFIGNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTE
Sbjct: 351 TAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 140 AESNMNDLVSEYQQYQ 93
AESNMNDLVSEYQQYQ
Sbjct: 411 AESNMNDLVSEYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 405 bits (997), Expect = e-113
Identities = 186/196 (94%), Positives = 193/196 (98%)
Frame = -2
Query: 680 ATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELT 501
ATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSR +QQYRA+TVPELT
Sbjct: 231 ATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELT 290
Query: 500 QQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVK 321
QQ FDAKNMMAACDPRHGRYLT AA+FRGRMSMKEVDEQM+NIQNKNSSYFV+WIPNNVK
Sbjct: 291 QQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVK 350
Query: 320 TAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 141
TAVCDIPPRGLKMSATFIGNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTE
Sbjct: 351 TAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 140 AESNMNDLVSEYQQYQ 93
AESNMNDLVSEYQQYQ
Sbjct: 411 AESNMNDLVSEYQQYQ 426
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 400 bits (984), Expect = e-112
Identities = 183/195 (93%), Positives = 193/195 (98%)
Frame = -2
Query: 677 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQ 498
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPL+++G+Q YRALTV ELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQ 291
Query: 497 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKT 318
QMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD+QMMN+QNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKT 351
Query: 317 AVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 138
AVCDIPPRGLKMSATFIGNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 137 ESNMNDLVSEYQQYQ 93
ESNMNDLVSEYQQYQ
Sbjct: 412 ESNMNDLVSEYQQYQ 426
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 398 bits (979), Expect = e-111
Identities = 180/195 (92%), Positives = 193/195 (98%)
Frame = -2
Query: 677 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQ 498
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPL+++G+Q YRALTV ELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQ 291
Query: 497 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKT 318
QMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQM+N+QNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 317 AVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 138
AVCDIPPRGLKM+ATF+GNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 137 ESNMNDLVSEYQQYQ 93
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLISEYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 396 bits (974), Expect = e-110
Identities = 179/195 (91%), Positives = 193/195 (98%)
Frame = -2
Query: 677 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQ 498
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPL+++G+Q YRALTV ELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQ 291
Query: 497 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKT 318
QMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQM+++QNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKT 351
Query: 317 AVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 138
AVCDIPPRGLKM+ATF+GNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 137 ESNMNDLVSEYQQYQ 93
ESNMNDL+SEYQQYQ
Sbjct: 412 ESNMNDLISEYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 209 bits (511), Expect = 1e-54
Identities = 99/194 (51%), Positives = 140/194 (72%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+SG+TT RF G L D+RKL N PRLHFF+ FAP+ +G +A ++ +LTQQ
Sbjct: 234 LSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQ 291
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
+ DAKN+M C+ G++L+ A ++RG+ + K+ EQ+++++N++ S +E +P + T
Sbjct: 292 VLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTD 350
Query: 314 VCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 135
VCDIP RGLK SATFI NSTAIQE KR+S+QF +FRRKAFLHWYT M+E EFT+AE
Sbjct: 351 VCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAE 407
Query: 134 SNMNDLVSEYQQYQ 93
+ +NDL+SE+QQY+
Sbjct: 408 NKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 209 bits (511), Expect = 1e-54
Identities = 99/194 (51%), Positives = 140/194 (72%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+SG+TT RF G L D+RKL N PRLHFF+ FAP+ +G +A ++ +LTQQ
Sbjct: 234 LSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQ 291
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
+ DAKN+M C+ G++L+ A ++RG+ + K+ EQ+++++N++ S +E +P + T
Sbjct: 292 VLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTD 350
Query: 314 VCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 135
VCDIP RGLK SATFI NSTAIQE KR+S+QF +FRRKAFLHWYT M+E EFT+AE
Sbjct: 351 VCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAE 407
Query: 134 SNMNDLVSEYQQYQ 93
+ +NDL+SE+QQY+
Sbjct: 408 NKVNDLISEFQQYE 421
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 161 bits (390), Expect = 6e-40
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 294
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K
Sbjct: 295 CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVG 354
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 355 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA ++ L +Y++
Sbjct: 415 EGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 161 bits (390), Expect = 6e-40
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 234 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 293
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K
Sbjct: 294 CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVG 353
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 354 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 413
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA ++ L +Y++
Sbjct: 414 EGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 161 bits (390), Expect = 6e-40
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 294
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K
Sbjct: 295 CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVG 354
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 355 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA ++ L +Y++
Sbjct: 415 EGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 161 bits (390), Expect = 6e-40
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 294
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K
Sbjct: 295 CFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVG 354
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 355 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA ++ L +Y++
Sbjct: 415 EGEFSEAREDLAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 160 bits (389), Expect = 7e-40
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 233 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNS 292
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K
Sbjct: 293 CFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVG 352
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 353 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EFTEA ++ L +Y++
Sbjct: 413 EGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 160 bits (389), Expect = 7e-40
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 233 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNS 292
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K
Sbjct: 293 CFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVG 352
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 353 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EFTEA ++ L +Y++
Sbjct: 413 EGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 160 bits (389), Expect = 7e-40
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 233 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNS 292
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K
Sbjct: 293 CFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVG 352
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 353 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EFTEA ++ L +Y++
Sbjct: 413 EGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 160 bits (389), Expect = 7e-40
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 233 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNS 292
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K
Sbjct: 293 CFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVG 352
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 353 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EFTEA ++ L +Y++
Sbjct: 413 EGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 158 bits (384), Expect = 3e-39
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 233 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNS 292
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K
Sbjct: 293 CFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVG 352
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 353 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EFTEA ++ L +Y++
Sbjct: 413 EGEFTEAREDLAALEKDYEE 432
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 158 bits (384), Expect = 3e-39
Identities = 73/200 (36%), Positives = 116/200 (58%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S VT LRF G LN DL + N+VP+PR+HF + +AP+ S + +TV E+TQQ
Sbjct: 240 ISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQ 299
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ M CDPR G+Y+ ++RG + K+V+ + +++ K S FV+W P K
Sbjct: 300 CFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVG 359
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP L+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 360 INYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 419
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA ++ L +Y++
Sbjct: 420 EGEFSEAREDLAALEKDYEE 439
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 158 bits (384), Expect = 3e-39
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T
Sbjct: 233 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNS 292
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K
Sbjct: 293 CFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVG 352
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 353 INYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EFTEA ++ L +Y++
Sbjct: 413 EGEFTEAREDLAALEKDYEE 432
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 157 bits (381), Expect = 7e-39
Identities = 72/200 (36%), Positives = 116/200 (58%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNV 294
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ + M CDPR+G+Y+ ++RG + KE++ + I+ K + FV+W P K
Sbjct: 295 CFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVG 354
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP L+ + + N+TAIQE + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 355 INYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA +M L +Y++
Sbjct: 415 EGEFSEAREDMAALEKDYEE 434
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 156 bits (378), Expect = 2e-38
Identities = 72/200 (36%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + + PL S ++ L+V E+T+
Sbjct: 232 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISSAHHEF--LSVDEITKS 289
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+A N M CDP+HG+Y+ V ++RG + K+V + +I+ + S FV+W P K
Sbjct: 290 CFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVG 349
Query: 314 VCDIPP--------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + + + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+
Sbjct: 350 LNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGME 409
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA ++ L +Y++
Sbjct: 410 EGEFSEAREDLAALEKDYEE 429
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 153 bits (370), Expect = 1e-37
Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + +APL S + TV ++T
Sbjct: 241 ISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHA 300
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K
Sbjct: 301 CFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVG 360
Query: 314 VCDIPPRGL--------KMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + S I N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 361 INYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 420
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA +M L +Y++
Sbjct: 421 EGEFSEAREDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 153 bits (370), Expect = 1e-37
Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + +APL S + TV ++T
Sbjct: 213 ISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHA 272
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K
Sbjct: 273 CFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVG 332
Query: 314 VCDIPPRGL--------KMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ PP + S I N+TAI E + R+ +F M+ ++AF+HWY GEGM+
Sbjct: 333 INYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 392
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF+EA +M L +Y++
Sbjct: 393 EGEFSEAREDMAALEKDYEE 412
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 144 bits (349), Expect = 5e-35
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 8/200 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
+S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V ++T
Sbjct: 238 VSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHM 297
Query: 494 MFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTA 315
F+ N M CDP G+Y+ V ++RG + K+V+ + +++ K FV+W P K
Sbjct: 298 CFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVG 357
Query: 314 V---CDIPPRG-----LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMD 159
+ I G + + + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+
Sbjct: 358 INYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGME 417
Query: 158 EMEFTEAESNMNDLVSEYQQ 99
E EF EA ++ L +Y +
Sbjct: 418 EGEFMEARDDLAALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -2
Query: 269 IGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 99
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 8/199 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
MS T RF + +R L ++ PFP +HF +P+ R +V ++T+
Sbjct: 238 MSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRF 295
Query: 494 MFDAKNMMAACDPR---HGRYLTVAAVFRGRMSMKEV--DEQMMNIQNKNSSYFVEWIPN 330
+ +MM + R + L+ +G++ + EQ ++ + +++
Sbjct: 296 LLKPTSMMVSTASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQNVDFAIRRPPFYMLKPLR 355
Query: 329 NVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEME 150
+ + K+S + NST++ LF+ + ++ + ++AF+ + E +D
Sbjct: 356 MMHAPLSPYVRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFS 413
Query: 149 FTEAESNMN---DLVSEYQ 102
+ M+ DL+ EY+
Sbjct: 414 LDMMDDAMHIVQDLLDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 8/199 (4%)
Frame = -2
Query: 674 MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQ 495
MS T RF + +R L ++ PFP +HF +P+ R +V ++T+
Sbjct: 238 MSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRF 295
Query: 494 MFDAKNMMAACDPR---HGRYLTVAAVFRGRMSMKEV--DEQMMNIQNKNSSYFVEWIPN 330
+ +MM + R + L+ +G++ + EQ ++ + +++
Sbjct: 296 LLKPTSMMVSTASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQNVDFAIRRPPFYMLKPLR 355
Query: 329 NVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEME 150
+ + K+S + NST++ LF+ + ++ + ++AF+ + E +D
Sbjct: 356 MMHAPLSPYVRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFS 413
Query: 149 FTEAESNMN---DLVSEYQ 102
+ M+ DL+ EY+
Sbjct: 414 LDMMDDAMHIVQDLLDEYK 432
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +2
Query: 407 TCDLGRQRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSAT 586
T +PQ + +G+ SS + AAS+ AP + GT S + + + +S+T
Sbjct: 1480 TSSASSTQPQMSTSQGSSAGSTVASSTASPAASSTAPSSTGTMSSTSSGTVGSTISESST 1539
Query: 587 VGTAPCSLLACADLHSTDQGTVDKSS 664
+A + + S+ V SS
Sbjct: 1540 TASASSQTGSTVTMGSSSTSGVSTSS 1565
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -2
Query: 614 LAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGRYL 438
L M PF LH IP + RG ++LT E+ +Q+ NM+ + + +G+ +
Sbjct: 6 LTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLT--EMHRQLLTKTNMIDSVIETYNGKPI 63
Query: 437 TVAAVFRGRMSMKEVDE 387
A + + +KE DE
Sbjct: 64 PAAIEAKKKQIIKERDE 80
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 425 QRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KS-ATVGTAP 601
++ +S SD D K P ++ TSA +TP P A S +S+ P K+ A P
Sbjct: 400 KKAESSSDSSDDEKKPV--AKPTSAKATPKPAAKKADSSSDSSDDEAPAKKTPAKAAPKP 457
Query: 602 CSLLACADLHSTD 640
S A + S+D
Sbjct: 458 ASKKAESSSDSSD 470
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 422 RQRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSATVGTAP 601
++ S SD D K P ++ TSA +TP P A S +S+ P K V P
Sbjct: 612 KKAASSSSDSSDDEKKPV--AKPTSAKATPKPAAKKADSSSDSSDDEAPA-KKTPVKPTP 668
Query: 602 CSLLACADLHSTDQGTVDK 658
++A S+D +K
Sbjct: 669 VKIVAKKVDSSSDSSDDEK 687
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +2
Query: 443 SDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSATVGTAPCSLLACA 622
+D +D +++T A + P P + S +S+ P KS T P A
Sbjct: 555 ADLSSDFSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAAKSTPAKTTPKPTAKKA 614
Query: 623 DLHSTDQGTVDK 658
S+D +K
Sbjct: 615 ASSSSDSSDDEK 626
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 422 RQRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSATVGTAP 601
++ S SD D K P ++ TSA +TP P A S +S+ P K V P
Sbjct: 337 KKAASSSSDSSDDEKKPV--AKPTSAKATPKPAAKKADSSSDSSDDEAPA-KKTPVKPTP 393
Query: 602 CSLLACADLHSTDQGTVDK 658
++A S+D +K
Sbjct: 394 VKIVAKKVDSSSDSSDDEK 412
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +2
Query: 443 SDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSATVGTAPCSLLACA 622
+D +D +++T A + P P + S +S+ P KS T P A
Sbjct: 280 ADLSSDFSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAAKSTPAKTTPKPTAKKA 339
Query: 623 DLHSTDQGTVDK 658
S+D +K
Sbjct: 340 ASSSSDSSDDEK 351
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 599 VPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 447
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 599 VPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 447
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical
protein F40F4.6 protein.
Length = 2214
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 481 FASNICCVNSGTVSARYC*LPRDVRGAKPGMKKC 582
+ NI C N GT S +C P G M +C
Sbjct: 864 YCQNIICYNGGTASGDHCVCPPGYAGESCEMARC 897
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 481 FASNICCVNSGTVSARYC*LPRDVRGAKPGMKKC 582
+ NI C N GTVS C P G + +C
Sbjct: 867 YCQNIVCYNGGTVSGGQCVCPPGYAGESCEVPRC 900
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 461 HKPPSCSSRQTSAASTPAPLAHGTADSRVTS-EARNPV*KSATVGTAPCS 607
H PP ++ T A TP A D + TS +ARNP TV T S
Sbjct: 86 HSPPCTTAGNTPAGGTPGYRAPVPPDPQPTSAQARNP---PVTVATTQAS 132
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -2
Query: 311 CDIPPRGLKMSATFIGNST------AIQELFKRVSEQFTAMFRRKAFLHWYT--GEGMDE 156
C I PR + T I N T +QEL K + E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 155 MEFTEAESNMNDLVSEY 105
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical
protein C06C6.5a protein.
Length = 359
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 461 HKPPSCSSRQTSAASTPAPLAHGTADSRV 547
+KPPS S TS++STP L SR+
Sbjct: 82 NKPPSISEALTSSSSTPPSLPISQLPSRI 110
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -2
Query: 311 CDIPPRGLKMSATFIGNST------AIQELFKRVSEQFTAMFRRKAFLHWYT--GEGMDE 156
C I PR + T I N T +QEL K + E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 155 MEFTEAESNMNDLVSEY 105
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -2
Query: 311 CDIPPRGLKMSATFIGNST------AIQELFKRVSEQFTAMFRRKAFLHWYT--GEGMDE 156
C I PR + T I N T +QEL K + E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 155 MEFTEAESNMNDLVSEY 105
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,824,564
Number of Sequences: 27780
Number of extensions: 273943
Number of successful extensions: 979
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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