Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e19
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    25   1.9  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   3.3  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    24   3.3  

>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 92  ERLLSIKSHVFIVPVVF*GFECIGTIHCVFNPDGNAI 202
           E++  IK   F+   V    EC+G    V N DG  I
Sbjct: 45  EKIHEIKKQCFMEMEVICAMECVGRKKEVVNEDGTLI 81


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 592 AILPPERRDKIKSAL 548
           A+LPP+ RDK K A+
Sbjct: 107 AMLPPDMRDKAKEAI 121


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 592 AILPPERRDKIKSAL 548
           A+LPP+ RDK K A+
Sbjct: 105 AMLPPDMRDKAKEAI 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,838
Number of Sequences: 2352
Number of extensions: 11607
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)