Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e19
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3100|AAN13903.1|  551|Drosophila melanogaster CG31424-P...    30   2.1  
AY051693-1|AAK93117.1|  216|Drosophila melanogaster LD23959p pro...    29   4.9  
AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-P...    29   4.9  
AE014297-1007|AAO41528.1|  244|Drosophila melanogaster CG33105-P...    29   4.9  
AE014297-1001|AAG22137.2|  216|Drosophila melanogaster CG33104-P...    29   4.9  
AE014296-720|AAF47812.1|  320|Drosophila melanogaster CG12766-PA...    28   8.6  

>AE014297-3100|AAN13903.1|  551|Drosophila melanogaster CG31424-PA
           protein.
          Length = 551

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 488 FTQRLKILFSLLGTKKIIFF*SAFNLVSSFGR 583
           FT+R K+LFSL G      F  +F ++ S+ R
Sbjct: 396 FTERAKLLFSLKGNHAFTLFSESFAIIESYQR 427


>AY051693-1|AAK93117.1|  216|Drosophila melanogaster LD23959p
           protein.
          Length = 216

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/70 (28%), Positives = 29/70 (41%)
 Frame = -1

Query: 394 VNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRLARFM 215
           V+   QV  H  DY    QKE L   +LR     +L++V +I  E    R    R     
Sbjct: 120 VHLDIQVGEHAIDYAHVAQKEKLTELQLR--IRQLLDQVEQITKEQNYQRYREERFRHTS 177

Query: 214 VAISDRIAVW 185
            + + R+  W
Sbjct: 178 ESTNSRVLWW 187


>AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-PA
            protein.
          Length = 1602

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 445  KELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSN 317
            K L+DKQKE      + V  +  V YH+ + I +G  + L +N
Sbjct: 1064 KPLMDKQKERSTSYTYKVGQAVVVTYHMDNMIYRGIVQRLENN 1106


>AE014297-1007|AAO41528.1|  244|Drosophila melanogaster CG33105-PA
           protein.
          Length = 244

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/70 (28%), Positives = 29/70 (41%)
 Frame = -1

Query: 394 VNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRLARFM 215
           V+   QV  H  DY    QKE L   +LR     +L++V +I  E    R    R     
Sbjct: 120 VHLDIQVGEHAIDYAHVAQKEKLTELQLR--IRQLLDQVEQITKEQNYQRYREERFRHTS 177

Query: 214 VAISDRIAVW 185
            + + R+  W
Sbjct: 178 ESTNSRVLWW 187


>AE014297-1001|AAG22137.2|  216|Drosophila melanogaster CG33104-PA
           protein.
          Length = 216

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/70 (28%), Positives = 29/70 (41%)
 Frame = -1

Query: 394 VNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRLARFM 215
           V+   QV  H  DY    QKE L   +LR     +L++V +I  E    R    R     
Sbjct: 120 VHLDIQVGEHAIDYAHVAQKEKLTELQLR--IRQLLDQVEQITKEQNYQRYREERFRHTS 177

Query: 214 VAISDRIAVW 185
            + + R+  W
Sbjct: 178 ESTNSRVLWW 187


>AE014296-720|AAF47812.1|  320|Drosophila melanogaster CG12766-PA
           protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 355 YIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRL 227
           ++  G+ + +     +SIA VV+  V E+   P P  SNP R+
Sbjct: 229 FMYDGKVQAIADKYNKSIAQVVIRYVIELGTIPLPKSSNPKRI 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,893,260
Number of Sequences: 53049
Number of extensions: 488352
Number of successful extensions: 1337
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)