Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e17
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   111   2e-26
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   3.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   4.9  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   6.5  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.6  
AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    23   8.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.6  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  111 bits (266), Expect = 2e-26
 Identities = 56/116 (48%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
 Frame = -2

Query: 490 GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPI 311
           GS++   K KFQINLD+Q FSP++I+VK VD  V+VE  HEEKQD HG+VSR F RR  +
Sbjct: 5   GSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYML 64

Query: 310 PEXXDTDAVESRLSSDGVLTVSMPLQ--RRISNERRVPIIQTG-PVK-ISDEPKPE 155
           P+  +   + S LSSDG+LT++ P +   + + ER +PI  TG P+K ++ +  PE
Sbjct: 65  PKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPE 120


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 346 WVSRRFTRRCPIPEXXDTDAVE 281
           W +  F+R C  P+  D DAV+
Sbjct: 422 WETGHFSRDCKGPDRTDCDAVK 443


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 431 KVLNVQIDLEFRFILLNRTSLTQSWLPP*KLAP 529
           KV    + L  R   ++  S+T SW PP +L P
Sbjct: 300 KVKPEDVPLNLRAHDVSTHSMTLSWAPPIRLNP 332


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 357 SCFSS*RASTTTKPSTIFTVMSSGEKC 437
           SC S+   STT  P+  F    SG+ C
Sbjct: 125 SCSSNECVSTTETPTRHFFCCCSGDNC 151


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 186 GPVCMMGTLRSLEIRRCKGMDTVRTPS 266
           G VC  G +R  +   C  +DT   P+
Sbjct: 57  GCVCKKGFVRETQFGNCVPVDTTYNPT 83


>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 134 RFNRINAFWLRLIGYLHRTSLYDGHSAL 217
           + N+I A +     Y+H T+L++G  AL
Sbjct: 169 QMNKIKATFDTTRFYMHLTNLFNGDKAL 196


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 102  PVTAYSPFAGGVSIESTHSGFGSSDIFTGPVCMMGT 209
            P T+     GG S     S   +S + TGP    GT
Sbjct: 1870 PATSSVSTTGGSSSTMVSSAVSNSAVATGPAVNNGT 1905


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 284 HGVCVAXFGYRAASCEPTGHPA 349
           HG  +A    ++AS  P+ HPA
Sbjct: 727 HGAPLALTSSKSASTHPSPHPA 748


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,255
Number of Sequences: 2352
Number of extensions: 11711
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)