Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14e17
(542 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77635-1|CAB55438.1| 187|Drosophila melanogaster lethal(2)essen... 117 1e-26
AY047516-1|AAK77248.1| 187|Drosophila melanogaster GH01960p pro... 117 1e-26
AJ250883-1|CAB60198.1| 187|Drosophila melanogaster Efl21 protei... 117 1e-26
AE013599-3658|AAF47041.1| 187|Drosophila melanogaster CG4533-PA... 117 1e-26
X03889-1|CAA27525.1| 186|Drosophila melanogaster heat shock pro... 100 1e-21
V00210-1|CAA23494.1| 186|Drosophila melanogaster protein ( D. m... 100 1e-21
J01100-1|AAA28637.1| 186|Drosophila melanogaster heat shock pro... 100 1e-21
AY061081-1|AAL28629.1| 186|Drosophila melanogaster LD06759p pro... 100 1e-21
AE014296-1632|AAF50286.1| 186|Drosophila melanogaster CG4463-PA... 100 1e-21
X03891-1|CAA27527.1| 213|Drosophila melanogaster heat shock pro... 97 1e-20
J01101-1|AAA28638.1| 213|Drosophila melanogaster heat shock pro... 97 1e-20
AY118471-1|AAM49840.1| 213|Drosophila melanogaster GM13686p pro... 97 1e-20
AE014296-1633|AAF50285.1| 213|Drosophila melanogaster CG4466-PA... 97 1e-20
BT023289-1|AAY55705.1| 199|Drosophila melanogaster IP02523p pro... 97 2e-20
AE014296-1624|AAF50292.1| 199|Drosophila melanogaster CG4190-PA... 97 2e-20
X03890-1|CAA27526.1| 208|Drosophila melanogaster heat shock pro... 96 2e-20
J01099-1|AAA28636.1| 208|Drosophila melanogaster heat shock pro... 96 2e-20
AY069419-1|AAL39564.1| 208|Drosophila melanogaster LD11379p pro... 96 2e-20
AE014296-1630|AAF50288.1| 208|Drosophila melanogaster CG4183-PA... 96 2e-20
BT001462-1|AAN71217.1| 137|Drosophila melanogaster GM22862p pro... 85 4e-17
AE013599-3659|AAM68267.1| 145|Drosophila melanogaster CG4533-PB... 85 4e-17
BT016062-1|AAV36947.1| 445|Drosophila melanogaster LP13637p pro... 83 3e-16
AE014296-1631|AAF50287.1| 445|Drosophila melanogaster CG4167-PA... 83 3e-16
M26267-1|AAA28634.1| 238|Drosophila melanogaster protein ( D.me... 81 1e-15
BT022082-1|AAY33498.1| 154|Drosophila melanogaster RH03891p pro... 73 3e-13
AE014296-1313|AAF50518.1| 154|Drosophila melanogaster CG7409-PA... 73 3e-13
J01098-1|AAA28635.1| 174|Drosophila melanogaster heat shock pro... 70 2e-12
AY119034-1|AAM50894.1| 174|Drosophila melanogaster LP05734p pro... 70 2e-12
AY060412-1|AAL25451.1| 174|Drosophila melanogaster LD36162p pro... 70 2e-12
AE014296-1628|AAN11962.1| 174|Drosophila melanogaster CG4460-PB... 70 2e-12
AE014296-1627|AAF50290.1| 174|Drosophila melanogaster CG4460-PA... 70 2e-12
BT023400-1|AAY55816.1| 200|Drosophila melanogaster IP01061p pro... 68 7e-12
BT022727-1|AAY55143.1| 200|Drosophila melanogaster RH36186p pro... 68 7e-12
AE014296-1629|AAF50289.1| 200|Drosophila melanogaster CG4461-PA... 68 7e-12
AY061439-1|AAL28987.1| 183|Drosophila melanogaster LD37169p pro... 68 1e-11
AE014298-2885|AAF48980.1| 183|Drosophila melanogaster CG14207-P... 68 1e-11
AE014298-2884|AAN09508.1| 192|Drosophila melanogaster CG14207-P... 68 1e-11
X06542-1|CAA29788.1| 169|Drosophila melanogaster protein ( Dros... 56 2e-08
BT025130-1|ABE73301.1| 217|Drosophila melanogaster IP07647p pro... 56 2e-08
AE014134-1762|AAF52857.1| 217|Drosophila melanogaster CG13133-P... 56 2e-08
AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-P... 28 9.5
>X77635-1|CAB55438.1| 187|Drosophila melanogaster
lethal(2)essential for life protein.
Length = 187
Score = 117 bits (281), Expect = 1e-26
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 7/134 (5%)
Frame = -2
Query: 541 PEISRSQF--SWRQPGLRE---GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEA 377
P + RS + W L++ GS++ D KF++ LD+Q FSP +ITVK+ D FV+VE
Sbjct: 47 PTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEG 106
Query: 376 LHEEKQDQHGWVSRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQR--RISNERRVP 203
HEEKQD+HG+VSR+F+RR +P + D V S LSSDG+LT+ P++ ER V
Sbjct: 107 KHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKAPMKALPPPQTERLVQ 166
Query: 202 IIQTGPVKISDEPK 161
I QTGP D K
Sbjct: 167 ITQTGPSSKEDNAK 180
>AY047516-1|AAK77248.1| 187|Drosophila melanogaster GH01960p
protein.
Length = 187
Score = 117 bits (281), Expect = 1e-26
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 7/134 (5%)
Frame = -2
Query: 541 PEISRSQF--SWRQPGLRE---GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEA 377
P + RS + W L++ GS++ D KF++ LD+Q FSP +ITVK+ D FV+VE
Sbjct: 47 PTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEG 106
Query: 376 LHEEKQDQHGWVSRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQR--RISNERRVP 203
HEEKQD+HG+VSR+F+RR +P + D V S LSSDG+LT+ P++ ER V
Sbjct: 107 KHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKAPMKALPPPQTERLVQ 166
Query: 202 IIQTGPVKISDEPK 161
I QTGP D K
Sbjct: 167 ITQTGPSSKEDNAK 180
>AJ250883-1|CAB60198.1| 187|Drosophila melanogaster Efl21 protein
protein.
Length = 187
Score = 117 bits (281), Expect = 1e-26
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 7/134 (5%)
Frame = -2
Query: 541 PEISRSQF--SWRQPGLRE---GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEA 377
P + RS + W L++ GS++ D KF++ LD+Q FSP +ITVK+ D FV+VE
Sbjct: 47 PTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEG 106
Query: 376 LHEEKQDQHGWVSRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQR--RISNERRVP 203
HEEKQD+HG+VSR+F+RR +P + D V S LSSDG+LT+ P++ ER V
Sbjct: 107 KHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKAPMKALPPPQTERLVQ 166
Query: 202 IIQTGPVKISDEPK 161
I QTGP D K
Sbjct: 167 ITQTGPSSKEDNAK 180
>AE013599-3658|AAF47041.1| 187|Drosophila melanogaster CG4533-PA,
isoform A protein.
Length = 187
Score = 117 bits (281), Expect = 1e-26
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 7/134 (5%)
Frame = -2
Query: 541 PEISRSQF--SWRQPGLRE---GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEA 377
P + RS + W L++ GS++ D KF++ LD+Q FSP +ITVK+ D FV+VE
Sbjct: 47 PTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEG 106
Query: 376 LHEEKQDQHGWVSRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQR--RISNERRVP 203
HEEKQD+HG+VSR+F+RR +P + D V S LSSDG+LT+ P++ ER V
Sbjct: 107 KHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKAPMKALPPPQTERLVQ 166
Query: 202 IIQTGPVKISDEPK 161
I QTGP D K
Sbjct: 167 ITQTGPSSKEDNAK 180
>X03889-1|CAA27525.1| 186|Drosophila melanogaster heat shock
protein hsp 23 protein.
Length = 186
Score = 100 bits (239), Expect = 1e-21
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Frame = -2
Query: 511 RQPGLREGSS---IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWV 341
+Q G GSS K K FQ+ +D+ HF P ++ VK+ D V+VE HEE++D HG++
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISD 170
+R F RR +P + D V S LSSDGVLT+ +P I NER V I Q GP ++
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 169 EPKPE 155
+ P+
Sbjct: 171 KENPK 175
>V00210-1|CAA23494.1| 186|Drosophila melanogaster protein ( D.
melanogaster heatshock gene hsp23 with flanking
sequences. ).
Length = 186
Score = 100 bits (239), Expect = 1e-21
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Frame = -2
Query: 511 RQPGLREGSS---IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWV 341
+Q G GSS K K FQ+ +D+ HF P ++ VK+ D V+VE HEE++D HG++
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISD 170
+R F RR +P + D V S LSSDGVLT+ +P I NER V I Q GP ++
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 169 EPKPE 155
+ P+
Sbjct: 171 KENPK 175
>J01100-1|AAA28637.1| 186|Drosophila melanogaster heat shock
protein hsp23 protein.
Length = 186
Score = 100 bits (239), Expect = 1e-21
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Frame = -2
Query: 511 RQPGLREGSS---IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWV 341
+Q G GSS K K FQ+ +D+ HF P ++ VK+ D V+VE HEE++D HG++
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISD 170
+R F RR +P + D V S LSSDGVLT+ +P I NER V I Q GP ++
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 169 EPKPE 155
+ P+
Sbjct: 171 KENPK 175
>AY061081-1|AAL28629.1| 186|Drosophila melanogaster LD06759p
protein.
Length = 186
Score = 100 bits (239), Expect = 1e-21
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Frame = -2
Query: 511 RQPGLREGSS---IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWV 341
+Q G GSS K K FQ+ +D+ HF P ++ VK+ D V+VE HEE++D HG++
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISD 170
+R F RR +P + D V S LSSDGVLT+ +P I NER V I Q GP ++
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 169 EPKPE 155
+ P+
Sbjct: 171 KENPK 175
>AE014296-1632|AAF50286.1| 186|Drosophila melanogaster CG4463-PA
protein.
Length = 186
Score = 100 bits (239), Expect = 1e-21
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Frame = -2
Query: 511 RQPGLREGSS---IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWV 341
+Q G GSS K K FQ+ +D+ HF P ++ VK+ D V+VE HEE++D HG++
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISD 170
+R F RR +P + D V S LSSDGVLT+ +P I NER V I Q GP ++
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 169 EPKPE 155
+ P+
Sbjct: 171 KENPK 175
>X03891-1|CAA27527.1| 213|Drosophila melanogaster heat shock
protein hsp 27 protein.
Length = 213
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P+++TVK+VD VVVE HEE++D HG + R F R+ +P+ D +
Sbjct: 87 KDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFDPN 146
Query: 289 AVESRLSSDGVLTVSM---PLQRRISNERRVPIIQTGPVKIS-DEPKPECVD 146
V S +SSDGVLT+ P + + +ER V I QTGP +S P PE D
Sbjct: 147 EVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPAPEAGD 198
>J01101-1|AAA28638.1| 213|Drosophila melanogaster heat shock
protein hsp27 protein.
Length = 213
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P+++TVK+VD VVVE HEE++D HG + R F R+ +P+ D +
Sbjct: 87 KDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFDPN 146
Query: 289 AVESRLSSDGVLTVSM---PLQRRISNERRVPIIQTGPVKIS-DEPKPECVD 146
V S +SSDGVLT+ P + + +ER V I QTGP +S P PE D
Sbjct: 147 EVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPAPEAGD 198
>AY118471-1|AAM49840.1| 213|Drosophila melanogaster GM13686p
protein.
Length = 213
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P+++TVK+VD VVVE HEE++D HG + R F R+ +P+ D +
Sbjct: 87 KDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFDPN 146
Query: 289 AVESRLSSDGVLTVSM---PLQRRISNERRVPIIQTGPVKIS-DEPKPECVD 146
V S +SSDGVLT+ P + + +ER V I QTGP +S P PE D
Sbjct: 147 EVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPAPEAGD 198
>AE014296-1633|AAF50285.1| 213|Drosophila melanogaster CG4466-PA
protein.
Length = 213
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P+++TVK+VD VVVE HEE++D HG + R F R+ +P+ D +
Sbjct: 87 KDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFDPN 146
Query: 289 AVESRLSSDGVLTVSM---PLQRRISNERRVPIIQTGPVKIS-DEPKPECVD 146
V S +SSDGVLT+ P + + +ER V I QTGP +S P PE D
Sbjct: 147 EVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPAPEAGD 198
>BT023289-1|AAY55705.1| 199|Drosophila melanogaster IP02523p
protein.
Length = 199
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Frame = -2
Query: 496 REGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRC 317
R G+S K+ F+++LD+ F P ++TVK+V+ +VVE HEE++D HG VSR F RR
Sbjct: 71 RGGASNKQ--GNFEVHLDVGLFQPGELTVKLVNECIVVEGKHEEREDDHGHVSRHFVRRY 128
Query: 316 PIPEXXDTDAVESRLSSDGVLTVSMP--LQRRISNERRVPIIQTGP 185
P+P+ D+DA+ S LS DGVL +++P + + ER +PI GP
Sbjct: 129 PLPKEFDSDAIVSTLSEDGVLNITVPPLVSKEELKERIIPIKHVGP 174
>AE014296-1624|AAF50292.1| 199|Drosophila melanogaster CG4190-PA
protein.
Length = 199
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Frame = -2
Query: 496 REGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRC 317
R G+S K+ F+++LD+ F P ++TVK+V+ +VVE HEE++D HG VSR F RR
Sbjct: 71 RGGASNKQ--GNFEVHLDVGLFQPGELTVKLVNECIVVEGKHEEREDDHGHVSRHFVRRY 128
Query: 316 PIPEXXDTDAVESRLSSDGVLTVSMP--LQRRISNERRVPIIQTGP 185
P+P+ D+DA+ S LS DGVL +++P + + ER +PI GP
Sbjct: 129 PLPKEFDSDAIVSTLSEDGVLNITVPPLVSKEELKERIIPIKHVGP 174
>X03890-1|CAA27526.1| 208|Drosophila melanogaster heat shock
protein hsp26 protein.
Length = 208
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P ++ VK+VD ++VE HEE+QD HG + R F RR +P+ +
Sbjct: 86 KDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYKAE 145
Query: 289 AVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISDEPKPECVDSIETPPANG 119
V S+LSSDGVLTVS+P + + S ER + I Q GP ++ + V E NG
Sbjct: 146 QVVSQLSSDGVLTVSIPKPQAVEDKSKERIIQIQQVGPAHLNVKANESEVKGKENGAPNG 205
Query: 118 E 116
+
Sbjct: 206 K 206
>J01099-1|AAA28636.1| 208|Drosophila melanogaster heat shock
protein hsp26 protein.
Length = 208
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P ++ VK+VD ++VE HEE+QD HG + R F RR +P+ +
Sbjct: 86 KDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYKAE 145
Query: 289 AVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISDEPKPECVDSIETPPANG 119
V S+LSSDGVLTVS+P + + S ER + I Q GP ++ + V E NG
Sbjct: 146 QVVSQLSSDGVLTVSIPKPQAVEDKSKERIIQIQQVGPAHLNVKANESEVKGKENGAPNG 205
Query: 118 E 116
+
Sbjct: 206 K 206
>AY069419-1|AAL39564.1| 208|Drosophila melanogaster LD11379p
protein.
Length = 208
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P ++ VK+VD ++VE HEE+QD HG + R F RR +P+ +
Sbjct: 86 KDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYKAE 145
Query: 289 AVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISDEPKPECVDSIETPPANG 119
V S+LSSDGVLTVS+P + + S ER + I Q GP ++ + V E NG
Sbjct: 146 QVVSQLSSDGVLTVSIPKPQAVEDKSKERIIQIQQVGPAHLNVKANESEVKGKENGAPNG 205
Query: 118 E 116
+
Sbjct: 206 K 206
>AE014296-1630|AAF50288.1| 208|Drosophila melanogaster CG4183-PA
protein.
Length = 208
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K FQ+ +D+ F P ++ VK+VD ++VE HEE+QD HG + R F RR +P+ +
Sbjct: 86 KDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYKAE 145
Query: 289 AVESRLSSDGVLTVSMPLQRRI---SNERRVPIIQTGPVKISDEPKPECVDSIETPPANG 119
V S+LSSDGVLTVS+P + + S ER + I Q GP ++ + V E NG
Sbjct: 146 QVVSQLSSDGVLTVSIPKPQAVEDKSKERIIQIQQVGPAHLNVKANESEVKGKENGAPNG 205
Query: 118 E 116
+
Sbjct: 206 K 206
>BT001462-1|AAN71217.1| 137|Drosophila melanogaster GM22862p
protein.
Length = 137
Score = 85.4 bits (202), Expect = 4e-17
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
Frame = -2
Query: 541 PEISRSQF--SWRQPGLRE---GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEA 377
P + RS + W L++ GS++ D KF++ LD+Q FSP +ITVK+ D FV+VE
Sbjct: 47 PTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEG 106
Query: 376 LHEEKQDQHGWVSRRFTRRCPIP 308
HEEKQD+HG+VSR+F+RR +P
Sbjct: 107 KHEEKQDEHGYVSRQFSRRYQLP 129
>AE013599-3659|AAM68267.1| 145|Drosophila melanogaster CG4533-PB,
isoform B protein.
Length = 145
Score = 85.4 bits (202), Expect = 4e-17
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
Frame = -2
Query: 541 PEISRSQF--SWRQPGLRE---GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEA 377
P + RS + W L++ GS++ D KF++ LD+Q FSP +ITVK+ D FV+VE
Sbjct: 47 PTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEG 106
Query: 376 LHEEKQDQHGWVSRRFTRRCPIP 308
HEEKQD+HG+VSR+F+RR +P
Sbjct: 107 KHEEKQDEHGYVSRQFSRRYQLP 129
>BT016062-1|AAV36947.1| 445|Drosophila melanogaster LP13637p
protein.
Length = 445
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/90 (38%), Positives = 60/90 (66%)
Frame = -2
Query: 508 QPGLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRF 329
QP + + +++ FQ++++++ F+ +++TVK +D +VVE H+EK+D HG +SR F
Sbjct: 111 QPAASKSAYSVVNRNGFQVSMNVKQFAANELTVKTIDNCIVVEGQHDEKEDGHGVISRHF 170
Query: 328 TRRCPIPEXXDTDAVESRLSSDGVLTVSMP 239
R+ +P+ D + V S LSSDG+LTV P
Sbjct: 171 IRKYILPKGYDPNEVHSTLSSDGILTVKAP 200
>AE014296-1631|AAF50287.1| 445|Drosophila melanogaster CG4167-PA
protein.
Length = 445
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/90 (38%), Positives = 60/90 (66%)
Frame = -2
Query: 508 QPGLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRF 329
QP + + +++ FQ++++++ F+ +++TVK +D +VVE H+EK+D HG +SR F
Sbjct: 111 QPAASKSAYSVVNRNGFQVSMNVKQFAANELTVKTIDNCIVVEGQHDEKEDGHGVISRHF 170
Query: 328 TRRCPIPEXXDTDAVESRLSSDGVLTVSMP 239
R+ +P+ D + V S LSSDG+LTV P
Sbjct: 171 IRKYILPKGYDPNEVHSTLSSDGILTVKAP 200
>M26267-1|AAA28634.1| 238|Drosophila melanogaster protein (
D.melanogaster heatshock protein 1 gene, complete cds.
).
Length = 238
Score = 81.0 bits (191), Expect = 1e-15
Identities = 33/78 (42%), Positives = 56/78 (71%)
Frame = -2
Query: 472 DKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDT 293
+++ FQ++++++ F+ +++TVK +D +VVE H+EK+D HG +SR F R+ +P+ D
Sbjct: 123 NRNGFQVSMNVKQFAANELTVKTIDNCIVVEGQHDEKEDGHGVISRHFIRKYILPKGYDP 182
Query: 292 DAVESRLSSDGVLTVSMP 239
+ V S LSSDG+LTV P
Sbjct: 183 NEVHSTLSSDGILTVKAP 200
>BT022082-1|AAY33498.1| 154|Drosophila melanogaster RH03891p
protein.
Length = 154
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/99 (40%), Positives = 57/99 (57%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K F+ N+D+ F P +I+VK VVVEA HE+++D +V R +R +P +
Sbjct: 55 KDGFEANVDVHLFKPYEISVKTSGDTVVVEAKHEKRRDGDTFVGRHIVKRFVLPRGYYPN 114
Query: 289 AVESRLSSDGVLTVSMPLQRRISNERRVPIIQTGPVKIS 173
V S LSSDG+LTV P ++NER V + Q GP +S
Sbjct: 115 DVRSELSSDGILTVKCP--PYLTNERSVYVRQVGPSYLS 151
>AE014296-1313|AAF50518.1| 154|Drosophila melanogaster CG7409-PA
protein.
Length = 154
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/99 (40%), Positives = 57/99 (57%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDTD 290
K F+ N+D+ F P +I+VK VVVEA HE+++D +V R +R +P +
Sbjct: 55 KDGFEANVDVHLFKPYEISVKTSGDTVVVEAKHEKRRDGDTFVGRHIVKRFVLPRGYYPN 114
Query: 289 AVESRLSSDGVLTVSMPLQRRISNERRVPIIQTGPVKIS 173
V S LSSDG+LTV P ++NER V + Q GP +S
Sbjct: 115 DVRSELSSDGILTVKCP--PYLTNERSVYVRQVGPSYLS 151
>J01098-1|AAA28635.1| 174|Drosophila melanogaster heat shock
protein hsp22 protein.
Length = 174
Score = 70.1 bits (164), Expect = 2e-12
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Frame = -2
Query: 514 WRQPGLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVV-VEALHEEKQ-DQHGWV 341
W++ L +++ KD +++ LD++ +S ++ VK++D VV VEA E+++ +Q G+
Sbjct: 48 WQEQELAPPATVNKDG--YKLTLDVKDYS--ELKVKVLDESVVLVEAKSEQQEAEQGGYS 103
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRIS---NERRVPIIQTG-PVKIS 173
SR F R +P+ + D V S LS DGVLT+S+P + ER V I QTG P K S
Sbjct: 104 SRHFLGRYVLPDGYEADKVSSSLSDDGVLTISVPNPPGVQETLKEREVTIEQTGEPAKKS 163
Query: 172 -DEPK 161
+EPK
Sbjct: 164 AEEPK 168
>AY119034-1|AAM50894.1| 174|Drosophila melanogaster LP05734p
protein.
Length = 174
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Frame = -2
Query: 514 WRQPGLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVV-VEALHEEKQ-DQHGWV 341
W++ +++ KD +++ LD++ +S ++ VK++D VV VE E+++ +Q G+
Sbjct: 48 WQEQEFAPPATVNKDG--YKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEAEQGGYS 103
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRIS---NERRVPIIQTG-PVKIS 173
SR F RR +PE + D V S LSSDGVLT+S+P + ER V I QTG P K S
Sbjct: 104 SRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKEREVTIEQTGEPAKKS 163
Query: 172 DE 167
E
Sbjct: 164 AE 165
>AY060412-1|AAL25451.1| 174|Drosophila melanogaster LD36162p
protein.
Length = 174
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Frame = -2
Query: 514 WRQPGLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVV-VEALHEEKQ-DQHGWV 341
W++ +++ KD +++ LD++ +S ++ VK++D VV VE E+++ +Q G+
Sbjct: 48 WQEQEFAPPATVNKDG--YKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEAEQGGYS 103
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRIS---NERRVPIIQTG-PVKIS 173
SR F RR +PE + D V S LSSDGVLT+S+P + ER V I QTG P K S
Sbjct: 104 SRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKEREVTIEQTGEPAKKS 163
Query: 172 DE 167
E
Sbjct: 164 AE 165
>AE014296-1628|AAN11962.1| 174|Drosophila melanogaster CG4460-PB,
isoform B protein.
Length = 174
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Frame = -2
Query: 514 WRQPGLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVV-VEALHEEKQ-DQHGWV 341
W++ +++ KD +++ LD++ +S ++ VK++D VV VE E+++ +Q G+
Sbjct: 48 WQEQEFAPPATVNKDG--YKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEAEQGGYS 103
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRIS---NERRVPIIQTG-PVKIS 173
SR F RR +PE + D V S LSSDGVLT+S+P + ER V I QTG P K S
Sbjct: 104 SRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKEREVTIEQTGEPAKKS 163
Query: 172 DE 167
E
Sbjct: 164 AE 165
>AE014296-1627|AAF50290.1| 174|Drosophila melanogaster CG4460-PA,
isoform A protein.
Length = 174
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Frame = -2
Query: 514 WRQPGLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVV-VEALHEEKQ-DQHGWV 341
W++ +++ KD +++ LD++ +S ++ VK++D VV VE E+++ +Q G+
Sbjct: 48 WQEQEFAPPATVNKDG--YKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEAEQGGYS 103
Query: 340 SRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSMPLQRRIS---NERRVPIIQTG-PVKIS 173
SR F RR +PE + D V S LSSDGVLT+S+P + ER V I QTG P K S
Sbjct: 104 SRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKEREVTIEQTGEPAKKS 163
Query: 172 DE 167
E
Sbjct: 164 AE 165
>BT023400-1|AAY55816.1| 200|Drosophila melanogaster IP01061p
protein.
Length = 200
Score = 68.1 bits (159), Expect = 7e-12
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Frame = -2
Query: 535 ISRSQFSWRQP----GLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE 368
I + + W P G + D+ F+I++D++ F P DI VK D +V+V+ H
Sbjct: 69 IQSTPYEWAHPMRWDNYYSGERVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQGNHN 128
Query: 367 EKQD-QHGWVSRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSM----PLQRRISNERRVP 203
+ + +G V R F R+ +P + + V S +SSDG+LT+ P + ER V
Sbjct: 129 RRDEGSNGLVERHFVRKYLLPRGYNANEVISDISSDGILTIKAPPPPPAKYYTPGERLVR 188
Query: 202 IIQTGPVKI 176
+ +TG + +
Sbjct: 189 VHETGKLAL 197
>BT022727-1|AAY55143.1| 200|Drosophila melanogaster RH36186p
protein.
Length = 200
Score = 68.1 bits (159), Expect = 7e-12
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Frame = -2
Query: 535 ISRSQFSWRQP----GLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE 368
I + + W P G + D+ F+I++D++ F P DI VK D +V+V+ H
Sbjct: 69 IQSTPYEWAHPMRWDNYYSGERVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQGNHN 128
Query: 367 EKQD-QHGWVSRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSM----PLQRRISNERRVP 203
+ + +G V R F R+ +P + + V S +SSDG+LT+ P + ER V
Sbjct: 129 RRDEGSNGLVERHFVRKYLLPRGYNANEVISDISSDGILTIKAPPPPPAKYYTPGERLVR 188
Query: 202 IIQTGPVKI 176
+ +TG + +
Sbjct: 189 VHETGKLAL 197
>AE014296-1629|AAF50289.1| 200|Drosophila melanogaster CG4461-PA
protein.
Length = 200
Score = 68.1 bits (159), Expect = 7e-12
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Frame = -2
Query: 535 ISRSQFSWRQP----GLREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE 368
I + + W P G + D+ F+I++D++ F P DI VK D +V+V+ H
Sbjct: 69 IQSTPYEWAHPMRWDNYYSGERVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQGNHN 128
Query: 367 EKQD-QHGWVSRRFTRRCPIPEXXDTDAVESRLSSDGVLTVSM----PLQRRISNERRVP 203
+ + +G V R F R+ +P + + V S +SSDG+LT+ P + ER V
Sbjct: 129 RRDEGSNGLVERHFVRKYLLPRGYNANEVISDISSDGILTIKAPPPPPAKYYTPGERLVR 188
Query: 202 IIQTGPVKI 176
+ +TG + +
Sbjct: 189 VHETGKLAL 197
>AY061439-1|AAL28987.1| 183|Drosophila melanogaster LD37169p
protein.
Length = 183
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = -2
Query: 472 DKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDT 293
D ++ D+ ++P++I VK VD ++V A HEEK D V R + R +P+ +
Sbjct: 91 DNKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKS-VYREYNREFLLPKGVNP 149
Query: 292 DAVESRLSSDGVLTVSMPLQRRISNERRVPI 200
+++ S LS DGVLTV PL + E +PI
Sbjct: 150 ESIRSSLSKDGVLTVDAPLPALTAGETLIPI 180
>AE014298-2885|AAF48980.1| 183|Drosophila melanogaster CG14207-PA,
isoform A protein.
Length = 183
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = -2
Query: 472 DKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDT 293
D ++ D+ ++P++I VK VD ++V A HEEK D V R + R +P+ +
Sbjct: 91 DNKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKS-VYREYNREFLLPKGVNP 149
Query: 292 DAVESRLSSDGVLTVSMPLQRRISNERRVPI 200
+++ S LS DGVLTV PL + E +PI
Sbjct: 150 ESIRSSLSKDGVLTVDAPLPALTAGETLIPI 180
>AE014298-2884|AAN09508.1| 192|Drosophila melanogaster CG14207-PB,
isoform B protein.
Length = 192
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = -2
Query: 472 DKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEXXDT 293
D ++ D+ ++P++I VK VD ++V A HEEK D V R + R +P+ +
Sbjct: 100 DNKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKS-VYREYNREFLLPKGVNP 158
Query: 292 DAVESRLSSDGVLTVSMPLQRRISNERRVPI 200
+++ S LS DGVLTV PL + E +PI
Sbjct: 159 ESIRSSLSKDGVLTVDAPLPALTAGETLIPI 189
>X06542-1|CAA29788.1| 169|Drosophila melanogaster protein (
Drosophila heat shockgene 3 from 67B locus. ).
Length = 169
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = -2
Query: 496 REGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRF 329
R G+S K+ F+++LD+ F P ++TVK+V+ +VVE HEE++D HG VSR F
Sbjct: 71 RGGASNKQ--GNFEVHLDVGLFQPGELTVKLVNECIVVEGKHEEREDDHGHVSRHF 124
>BT025130-1|ABE73301.1| 217|Drosophila melanogaster IP07647p
protein.
Length = 217
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVV-VEALHEEKQDQHGW--VSRRFTRRCPIPEXX 299
+ F++ LD+ HF ++TVK + V VE + + + G ++R FTR +P
Sbjct: 84 RGTFKVVLDVHHFQISELTVKAKNSDTVCVEGKQADDRAEKGQLCITREFTRSYKLPRHY 143
Query: 298 DTDAVESRLSSDGVLTVSMPLQRRISN-ERRVPIIQTGPV--KISDEPKPECVDSIETPP 128
D + S+DG+L +++P ++ + ER + I TG +SD P+ ++ +
Sbjct: 144 DATQARATFSADGILMITVPAPPKLDDVEREIEIEPTGNYFGSVSDPTAPKAIEQADVDG 203
Query: 127 ANGE 116
GE
Sbjct: 204 DGGE 207
>AE014134-1762|AAF52857.1| 217|Drosophila melanogaster CG13133-PA
protein.
Length = 217
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = -2
Query: 469 KSKFQINLDIQHFSPDDITVKIVDGFVV-VEALHEEKQDQHGW--VSRRFTRRCPIPEXX 299
+ F++ LD+ HF ++TVK + V VE + + + G ++R FTR +P
Sbjct: 84 RGTFKVVLDVHHFQISELTVKAKNSDTVCVEGKQADDRAEKGQLCITREFTRSYKLPRHY 143
Query: 298 DTDAVESRLSSDGVLTVSMPLQRRISN-ERRVPIIQTGPV--KISDEPKPECVDSIETPP 128
D + S+DG+L +++P ++ + ER + I TG +SD P+ ++ +
Sbjct: 144 DATQARATFSADGILMITVPAPPKLDDVEREIEIEPTGNYFGSVSDPTAPKAIEQADVDG 203
Query: 127 ANGE 116
GE
Sbjct: 204 DGGE 207
>AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-PB
protein.
Length = 4547
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 144 ESTHSGFGSSDIFTGPVCMMGTLRSLEIRRCKGMDTVRTPSE 269
++T G S D F GP + T ++ +IR KG+ V S+
Sbjct: 493 DATKQGIMSVDKFEGPTSIQVTYKAKDIREPKGIIAVHALSQ 534
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,019,783
Number of Sequences: 53049
Number of extensions: 514349
Number of successful extensions: 1456
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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