Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14e16
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 49 4e-06
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 42 6e-04
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z30662-7|CAA83141.2| 566|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 36 0.041
U22831-6|AAK20068.1| 579|Caenorhabditis elegans Hypothetical pr... 36 0.041
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 36 0.041
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 36 0.041
Z81486-9|CAB03991.1| 430|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.88
U41559-3|AAC24262.1| 334|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical pr... 30 1.5
U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein ... 30 1.5
U58744-3|AAL65790.1| 105|Caenorhabditis elegans Hypothetical pr... 29 2.7
U41263-5|AAC24427.1| 400|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 6.2
U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine rece... 28 6.2
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 28 8.2
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 28 8.2
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 28 8.2
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 28 8.2
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 28 8.2
AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP ... 28 8.2
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = -2
Query: 741 MFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
M + R + ++ IGGFNG + LVE +D DTL+W +P+ RSAL+A
Sbjct: 337 MVTLRTRVGVAVNQRQVYAIGGFNGQDRLDLVEKFDYDTLKWTTLSPLTRKRSALAA 393
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALS 574
+ M R F I+V GG++G++ + VE YD +W +PMN+ RS +S
Sbjct: 475 IPSMIQQRCRFGAATFKGKIYVAGGYDGTSFLKSVEVYDPVEKKWSPVSPMNMRRSRVS 533
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 729 RXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVL 562
R A + + ++V GG++G ++ +E YD + W PM RSA V+
Sbjct: 388 RSALAAAFVTNRLYVCGGYDGLHSLSSIEIYDINRNVWEAGPPMENMRSAAGVTVI 443
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
V+ M R + V ++ +F + GF+G + +E YD T W A + + +
Sbjct: 522 VSPMNMRRSRVSLVSTNEGLFAVAGFDGENNLCSMEQYDDVTDSWTIATALTCHEGGVGV 581
Query: 570 CVLAGLPN 547
V+ P+
Sbjct: 582 GVIPMPPH 589
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = -2
Query: 741 MFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
M + R + ++ IGGFNG + LVE +D DTL+W +P+ RSAL+A
Sbjct: 335 MVTLRTRVGVAVNQRQVYAIGGFNGQDRLDLVEKFDYDTLKWTTLSPLTRKRSALAA 391
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALS 574
+ M R F I+V GG++G++ + VE YD +W +PMN+ RS +S
Sbjct: 473 IPSMIQQRCRFGAATFKGKIYVAGGYDGTSFLKSVEVYDPVEKKWSPVSPMNMRRSRVS 531
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 729 RXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVL 562
R A + + ++V GG++G ++ +E YD + W PM RSA V+
Sbjct: 386 RSALAAAFVTNRLYVCGGYDGLHSLSSIEIYDINRNVWEAGPPMENMRSAAGVTVI 441
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
V+ M R + V ++ +F + GF+G + +E YD T W A + + +
Sbjct: 520 VSPMNMRRSRVSLVSTNEGLFAVAGFDGENNLCSMEQYDDVTDSWTIATALTCHEGGVGV 579
Query: 570 CVLAGLPN 547
V+ P+
Sbjct: 580 GVIPMPPH 587
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
+ M +AR A ++++I+ +GG + +T VE YD + EW A M++ R +
Sbjct: 460 IASMKTARRGIAVASIENVIYAVGGLDDTTCYKTVERYDIEEDEWSTVADMDVQRGGVGV 519
Query: 570 CVL 562
V+
Sbjct: 520 AVI 522
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 744 EMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAA 604
+M S R L ++ IGG +GS + VECYD W AA
Sbjct: 603 KMSSPRGGVGVAALGGKVYAIGGHDGSDYLNTVECYDPIANRWQPAA 649
Score = 34.3 bits (75), Expect = 0.094
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
V +M R ++ +F IGG +G++++ E +D +W A M R+
Sbjct: 507 VADMDVQRGGVGVAVIGRYLFAIGGNDGTSSLETCERFDPMIDKWKRIASMKNRRAGSGV 566
Query: 570 CVLAG 556
CVL G
Sbjct: 567 CVLDG 571
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
+ M +AR A ++++I+ +GG + +T VE YD + EW A M++ R +
Sbjct: 460 IASMKTARRGIAVASIENVIYAVGGLDDTTCYKTVERYDIEEDEWSTVADMDVQRGGVGV 519
Query: 570 CVL 562
V+
Sbjct: 520 AVI 522
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 744 EMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAA 604
+M S R L ++ IGG +GS + VECYD W AA
Sbjct: 603 KMSSPRGGVGVAALGGKVYAIGGHDGSDYLNTVECYDPIANRWQPAA 649
Score = 34.3 bits (75), Expect = 0.094
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
V +M R ++ +F IGG +G++++ E +D +W A M R+
Sbjct: 507 VADMDVQRGGVGVAVIGRYLFAIGGNDGTSSLETCERFDPMIDKWKRIASMKNRRAGSGV 566
Query: 570 CVLAG 556
CVL G
Sbjct: 567 CVLDG 571
>Z30662-7|CAA83141.2| 566|Caenorhabditis elegans Hypothetical
protein T16H12.6 protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 717 ATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSAC 568
A +++ + +IGGFNG+ + E YD W+ ++ RS SAC
Sbjct: 445 AVSIMNQVCMIIGGFNGNRRLDSAEIYDMREGLWHPVPSLHTARSNFSAC 494
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 708 LLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNR 586
+++D + V GGFNG+ +D T EW A MN R
Sbjct: 300 VVEDKLIVYGGFNGTQQFQTTVLFDLSTKEWRSGANMNDKR 340
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLN-RSAL 577
EV M R + A V +D+ I VIGGF+G E YD W+ P++ N R+
Sbjct: 384 EVANMAQMRSDGAVVTIDNKIVVIGGFDGRNIHQGGEVYDPVLDLWH---PLSSNMRTRR 440
Query: 576 SACVLAGLPN 547
+ C + N
Sbjct: 441 TGCTAVSIMN 450
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDM-IFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALS 574
V + +AR NF+ +D I+V GGF+G T E D + W M+ +SAL
Sbjct: 481 VPSLHTARSNFSACQMDTCSIYVAGGFDGQATTKESERLDLRSKMWQALPDMSEAKSALR 540
Query: 573 ACVLAGLP 550
L+ P
Sbjct: 541 MVTLSDHP 548
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 696 MIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRS 583
+IF GG NG + + E YD +W + A M RS
Sbjct: 356 LIFACGGMNGVSRLKTAEMYDYRADQWSEVANMAQMRS 393
>Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical
protein C53A5.9 protein.
Length = 480
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -2
Query: 735 SARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVLAG 556
+ R N A V IFV+GGFNG + +E E+ M RS ACV G
Sbjct: 316 NCRANAAVVACYGEIFVLGGFNGKSNEESIEKISASGNEFEIFGEMEGGRSGFGACVFQG 375
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 744 EMFSARXNFATVLLDDMIFVIGGF-NGSTTIPLVECYDGDTLEWYDAAPMNLNRSALS 574
EM R F + I++ GG+ N T+ V YD T W D M R A +
Sbjct: 360 EMEGGRSGFGACVFQGRIYIAGGWSNTRNTLKSVRSYDPYTKTWRDEPSMKNARKAFT 417
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -2
Query: 744 EMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSAL 577
+M + R +++ +GGF+G+T + E +D T W+ M+ RS++
Sbjct: 409 QMSARRSTHGITTCQQVLYAVGGFDGTTGLASAEYFDPHTGNWFPLPSMSTRRSSV 464
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECY---DGDTLEWYDA-APMNLNR 586
E+ M R N A L+ +++ +GG +GS+ + +EC D +W APM+ R
Sbjct: 547 ELANMAIPRRNTAATALNGLLYAVGGDDGSSNLSTIECIQLSDRSDAQWKIVDAPMSQGR 606
Query: 585 S 583
S
Sbjct: 607 S 607
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 693 IFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRS 583
++ GGFNG+ + V+ YD T W A M+ RS
Sbjct: 379 VYTTGGFNGAQRVRSVDFYDPRTDTWRSANQMSARRS 415
>U22831-6|AAK20068.1| 579|Caenorhabditis elegans Hypothetical
protein F47D12.7 protein.
Length = 579
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 717 ATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSAC 568
A +++ + +IGGFNG+ + E YD W+ + RS SAC
Sbjct: 458 AVSIMNQVCMIIGGFNGNRRLDSAEIYDMREGLWHPEPTLQTARSNFSAC 507
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 735 SARXNFATVLLDDM-IFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVLA 559
+AR NF+ +D ++V GGF+G TT E D + W M +SAL L+
Sbjct: 499 TARSNFSACQMDTCYVYVAGGFDGQTTTKESERLDLRSKMWQALPDMAEAKSALRMVTLS 558
Query: 558 GLP 550
P
Sbjct: 559 DHP 561
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLN-RSAL 577
EV M R + A V +D+ I IGGF+G E YD W+ P++ N R+
Sbjct: 397 EVANMTQMRSDGAVVTIDNKIVAIGGFDGRNIHQGGEVYDPVLDLWH---PLSSNMRTRR 453
Query: 576 SACVLAGLPN 547
+ C + N
Sbjct: 454 TGCTAVSIMN 463
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 696 MIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRS 583
++F GG NG + + E YD +W + A M RS
Sbjct: 369 LVFACGGMNGVSRLKTAEMYDYRADQWTEVANMTQMRS 406
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 708 LLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNR 586
+++D + V GGF+G +D T EW A MN R
Sbjct: 313 VVEDKLIVYGGFDGIKQFQTTVLFDLSTKEWRRGANMNDKR 353
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALS 574
+V + R + + ++ +GG +G + + +VE YD EW A M R +S
Sbjct: 385 DVAPTATCRTSVGVAAFNGSLYAVGGQDGESCLDVVEKYDPRKNEWAKVASMGTRRLGVS 444
Query: 573 ACVLAG 556
V+ G
Sbjct: 445 VSVVNG 450
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -2
Query: 744 EMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSAL 577
+M + R +++ +GGF+G+T + E +D T W+ M+ RS++
Sbjct: 409 QMSARRSTHGITTCQQVLYAVGGFDGTTGLASAEYFDPHTGNWFPLPSMSTRRSSV 464
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECY---DGDTLEWYDA-APMNLNR 586
E+ M R N A L+ +++ +GG +GS+ + +EC D +W APM+ R
Sbjct: 547 ELANMAIPRRNTAATALNGLLYAVGGDDGSSNLSTIECIQLSDRSDAQWKIVDAPMSQGR 606
Query: 585 S 583
S
Sbjct: 607 S 607
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 693 IFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRS 583
++ GGFNG+ + V+ YD T W A M+ RS
Sbjct: 379 VYTTGGFNGAQRVRSVDFYDPRTDTWRSANQMSARRS 415
>Z81486-9|CAB03991.1| 430|Caenorhabditis elegans Hypothetical
protein C53A5.11 protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 729 RXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACV 565
+ ++A V +F+IGG N T + VE +D + + + R+ SAC+
Sbjct: 201 KSHYAVVSSSTKVFIIGGMNNGTYLNRVEMFDKEKGIRVECTRLMHGRTRTSACI 255
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -2
Query: 729 RXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVLAG 556
R + + V +FV+GGFNG +E D+ + ++ + R+ ACV G
Sbjct: 295 RADASVVSFYGQLFVLGGFNGKDYEETIEKL-SDSKDKFEVCGNMVGRAGFGACVFRG 351
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGF-NGSTTIPLVECYDGDTLEWYDAAPMNLNR 586
V +M +R F + I++ GG+ N S T+ V YD T W D ++ +R
Sbjct: 454 VGDMQGSRAGFGSCAFRGRIYIAGGWSNSSNTLRSVRSYDPLTKSWRDEPSLSKDR 509
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 750 VTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSA 571
V M + + N+A I+++GG N + + VE YD + D M R+ SA
Sbjct: 314 VGRMPNPKSNYAVACSKSQIYIVGGMNNGSWLNNVEMYDREKNLRRDCNKMKRGRTRTSA 373
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRS 583
+ +M R + + ++ ++V GG++ ST + VE YD D EW D + R+
Sbjct: 360 DCNKMKRGRTRTSAGIHNNKMYVAGGYD-STYMNSVEVYDTDQGEWKDGPSLQRPRA 415
>Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical
protein R09A8.3 protein.
Length = 817
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -2
Query: 741 MFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVL 562
M + R + L+ IFV GG++ + VE YD +W + A M R +
Sbjct: 501 MSAPRCSIGASFLNGKIFVCGGYDRGECLRSVEEYDVVNGKWRNVAKMKAERGRFDCTIH 560
Query: 561 AG 556
G
Sbjct: 561 GG 562
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 717 ATVLLDDMIFVIGGFNGSTTIPLVECYDGDTLEW 616
A V ++IF IGGFNG + +E + + + W
Sbjct: 750 AVVTAGNVIFCIGGFNGVKFLDTIELLENEQIGW 783
>U41559-3|AAC24262.1| 334|Caenorhabditis elegans Hypothetical
protein C26B2.6 protein.
Length = 334
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 6 HGFYHFKNK*KISQISPHTAPICCMILTLSSIK 104
HG++H K+ ++ + HT PI +I SS K
Sbjct: 271 HGYFHLKSLPRLMSVGTHTPPILDLIFEASSRK 303
>Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical
protein R10H10.2 protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYD 634
E + R + A + ++ I+V GGFNG + VE Y+
Sbjct: 375 ETASLSDMRSDCAAEVFENQIYVSGGFNGDMILASVEVYN 414
>U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein
protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 753 EVTEMFSARXNFATVLLDDMIFVIGGFNGSTTIPLVECYD 634
E + R + A + ++ I+V GGFNG + VE Y+
Sbjct: 375 ETASLSDMRSDCAAEVFENQIYVSGGFNGDMILASVEVYN 414
>U58744-3|AAL65790.1| 105|Caenorhabditis elegans Hypothetical
protein F55F1.3 protein.
Length = 105
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 396 KLLHFDCTTSTPSKVNFKLLVLNDFVIVR-IEELDQHQRQAQLSPNKRRNARSVNR 560
++L K FK+ V F +++ + +LD+ QLSP + N ++ R
Sbjct: 33 RILELQTAEKMAIKEEFKIAVRKGFTLLKSVRQLDKKPTPEQLSPTRLHNVTAIER 88
>U41263-5|AAC24427.1| 400|Caenorhabditis elegans Hypothetical
protein T19D12.7 protein.
Length = 400
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 714 TVLLDDMIFVIGGFNGSTTIPLVECYDGDTL 622
TV L+D IFV +N STT ++C D +T+
Sbjct: 138 TVFLNDTIFV--AYNSSTTKCRIDCADAETM 166
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 675 FNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVLAGLPN 547
+N ST L +CY TL W+ A + L L+A + PN
Sbjct: 26 WNASTVPILSQCYQHTTLVWFPTAIVFLLAPILTAQIFYRRPN 68
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 675 FNGSTTIPLVECYDGDTLEWYDAAPMNLNRSALSACVLAGLPN 547
+N ST L +CY TL W+ A + L L+A + PN
Sbjct: 26 WNASTVPILSQCYQHTTLVWFPTAIVFLLAPILTAQIFYRRPN 68
>U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine
receptor, class i protein50 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = -2
Query: 396 FGLIMKIINCISDFFVIMRLFQISVIF*LYIGLSVNLLSN-LKSW-----CILILL*KC* 235
F L +IIN +SDF V + L Q +F ++ SV L ++ L+ W +LI C
Sbjct: 46 FMLAFQIINTVSDFHVTI-LMQAVPLFPIWAFFSVGLAADELEIWSHILIAVLITSVGCQ 104
Query: 234 SFILFFCF 211
L FCF
Sbjct: 105 FVSLEFCF 112
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical protein
F54D1.5 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 29 QIKNITDFSSHCADLLHDFNIVKYKNKFQK*PLNFNFITEKLSHKFTEQL-DTFILQRRT 205
++K I DF C D L +K K PL+ +TE + + + + F+L+ R
Sbjct: 1203 EMKRIQDFEEDCIDTLTRIRKLKLNTKE---PLSVTDLTELTCQRVHDLMQENFLLKSRV 1259
Query: 206 YSKQKK 223
Y + K
Sbjct: 1260 YDIETK 1265
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 393 QKLLHFDCTTSTPSKVNFKLLVLNDFVIVRIEELDQHQRQAQL 521
+K+LH D T N +V+ DF ++++E L+ +R L
Sbjct: 328 KKILHRDLRTKNILLDNPNRVVVTDFALMKLERLENPRRNCTL 370
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 393 QKLLHFDCTTSTPSKVNFKLLVLNDFVIVRIEELDQHQRQAQL 521
+K+LH D T N +V+ DF ++++E L+ +R L
Sbjct: 368 KKILHRDLRTKNILLDNPNRVVVTDFALMKLERLENPRRNCTL 410
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 393 QKLLHFDCTTSTPSKVNFKLLVLNDFVIVRIEELDQHQRQAQL 521
+K+LH D T N +V+ DF ++++E L+ +R L
Sbjct: 328 KKILHRDLRTKNILLDNPNRVVVTDFALMKLERLENPRRNCTL 370
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 393 QKLLHFDCTTSTPSKVNFKLLVLNDFVIVRIEELDQHQRQAQL 521
+K+LH D T N +V+ DF ++++E L+ +R L
Sbjct: 368 KKILHRDLRTKNILLDNPNRVVVTDFALMKLERLENPRRNCTL 410
>AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1122
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 29 QIKNITDFSSHCADLLHDFNIVKYKNKFQK*PLNFNFITEKLSHKFTEQL-DTFILQRRT 205
++K I DF C D L +K K PL+ +TE + + + + F+L+ R
Sbjct: 919 EMKRIQDFEEDCIDTLTRIRKLKLNTKE---PLSVTDLTELTCQRVHDLMQENFLLKSRV 975
Query: 206 YSKQKK 223
Y + K
Sbjct: 976 YDIETK 981
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,146,237
Number of Sequences: 27780
Number of extensions: 326185
Number of successful extensions: 931
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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