Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e13
         (352 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical prote...    23   4.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   5.8  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    22   7.6  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   7.6  

>AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical protein
           11 protein.
          Length = 56

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 119 ICLFVFVTHSSKYFGWL 169
           ICLF + TH +  + WL
Sbjct: 16  ICLFFYHTHCTTAYLWL 32


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 21  GFTWIPDFAFVSSSYPVLIFESLLYHVGFLVG 116
           GF        + S+ PVL+FE+++Y     VG
Sbjct: 571 GFFSGQPLTILGSTGPVLVFETIVYEFCQKVG 602


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 109 WWEDLSFCICYP 144
           WWE  SF   YP
Sbjct: 23  WWESASFYQIYP 34


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 114 PPENQHDREAIQKLIQDMRKK-QMQSLESK 28
           PP ++H+RE I  L Q  ++  ++  LE++
Sbjct: 87  PPVDEHERELINMLEQKHKQNYRILDLEAR 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,383
Number of Sequences: 2352
Number of extensions: 8257
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)