Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e13
         (352 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC073275-1|AAQ93366.1|  111|Homo sapiens unknown protein.              29   3.1  
BC121046-1|AAI21047.1|  153|Homo sapiens ADAM18 protein protein.       28   7.2  
BC121045-1|AAI21046.1|  739|Homo sapiens ADAM metallopeptidase d...    28   7.2  
AY358321-1|AAQ88687.1|  715|Homo sapiens ADAM18 protein.               28   7.2  
AJ133004-1|CAB40812.1|  739|Homo sapiens tMDC III protein protein.     28   7.2  

>AC073275-1|AAQ93366.1|  111|Homo sapiens unknown protein.
          Length = 111

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 119 ICLFVFVTHSSKYFGWLKKKNNPTGN---DVYIAIL 217
           +C++++   +  YF +LK KN P  N   DVY  IL
Sbjct: 40  VCIYIYKRKTYIYFNYLKCKNLPNTNGKSDVYYIIL 75


>BC121046-1|AAI21047.1|  153|Homo sapiens ADAM18 protein protein.
          Length = 153

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 112 WEDLSFCICYPFFKIFWLVEKKEQSNRK*C 201
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 102 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 131


>BC121045-1|AAI21046.1|  739|Homo sapiens ADAM metallopeptidase
           domain 18 protein.
          Length = 739

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 112 WEDLSFCICYPFFKIFWLVEKKEQSNRK*C 201
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 688 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 717


>AY358321-1|AAQ88687.1|  715|Homo sapiens ADAM18 protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 112 WEDLSFCICYPFFKIFWLVEKKEQSNRK*C 201
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 664 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 693


>AJ133004-1|CAB40812.1|  739|Homo sapiens tMDC III protein protein.
          Length = 739

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 112 WEDLSFCICYPFFKIFWLVEKKEQSNRK*C 201
           W  LSFCI  PFF +F  V  K     K C
Sbjct: 688 WFILSFCIFLPFFIVFTTVIFKRNEISKSC 717


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,183,569
Number of Sequences: 237096
Number of extensions: 1168427
Number of successful extensions: 2103
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)