Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e13
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023698-1|AAY85098.1|   82|Drosophila melanogaster IP03474p pro...    84   6e-17
AE013599-2515|AAF57828.1|   82|Drosophila melanogaster CG14483-P...    84   6e-17
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    29   2.2  
AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-P...    27   8.9  

>BT023698-1|AAY85098.1|   82|Drosophila melanogaster IP03474p
           protein.
          Length = 82

 Score = 83.8 bits (198), Expect = 6e-17
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -2

Query: 243 MGNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 64
           MG W LEV +M MY +FPV LF  FNQP+YFEEWVT  KR+++PPE++   E +Q+ I++
Sbjct: 1   MGTWVLEVAKMGMYMAFPVTLFHLFNQPEYFEEWVTKKKRELYPPESKSHHEELQRAIRE 60


>AE013599-2515|AAF57828.1|   82|Drosophila melanogaster CG14483-PA
           protein.
          Length = 82

 Score = 83.8 bits (198), Expect = 6e-17
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -2

Query: 243 MGNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 64
           MG W LEV +M MY +FPV LF  FNQP+YFEEWVT  KR+++PPE++   E +Q+ I++
Sbjct: 1   MGTWVLEVAKMGMYMAFPVTLFHLFNQPEYFEEWVTKKKRELYPPESKSHHEELQRAIRE 60


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
            protein.
          Length = 1519

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 44   CICFFLISCINF*IASLSCWF 106
            CI  FLI+C  F I   +CWF
Sbjct: 1246 CIRIFLINCFFFIIYPFACWF 1266


>AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-PA
           protein.
          Length = 300

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 92  LSCWFSGGKICLFVFVTHSSKYFGWLKKKNNPTGNDVYI--AILPTSSFQLPIV*KFIF 262
           LSC  S     +F++V H  +Y   L    +P  N  Y    I+    F+LP + + +F
Sbjct: 151 LSCMISLTSSSIFIYVLHGGRY--QLFMLTHPAPNSAYFNSLIIRIIYFKLPDIYELVF 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,524,677
Number of Sequences: 53049
Number of extensions: 335527
Number of successful extensions: 834
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)