Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e02
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   1.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   6.0  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 561 RPNTFLKIYCTCVKTL*NSPESAICII 481
           RP T  KIY  CV T   +P SA+ II
Sbjct: 23  RPKTRAKIYALCVVTALVTP-SALSII 48


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = +3

Query: 417 ELLIFLIRAAGNASLCLFLVFILCKSQTLGN 509
           +LLIF++  +GN+++ + L+      ++  N
Sbjct: 80  KLLIFVVSLSGNSAVFIMLIISFMHKKSFKN 110


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 574  ILTLASQYIFENLLYVRKNIVEFPRVCDLHN 482
            I+T  S  + +    VRK  ++F ++C LH+
Sbjct: 1279 IVTYFSTNLPKRETEVRKKSLDFGKLCSLHH 1309


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 450 NASLCLFLVFILC 488
           +++ CLFL+F+ C
Sbjct: 288 DSTYCLFLLFVFC 300


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 450 NASLCLFLVFILC 488
           +++ CLFL+F+ C
Sbjct: 288 DSTYCLFLLFVFC 300


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 450 NASLCLFLVFILC 488
           +++ CLFL+F+ C
Sbjct: 288 DSTYCLFLLFVFC 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,474
Number of Sequences: 336
Number of extensions: 3127
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)