Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14e02
         (741 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113557-1|AAI13558.1|  322|Homo sapiens olfactory receptor, fam...    33   0.81 
BC101710-1|AAI01711.1|  322|Homo sapiens olfactory receptor, fam...    33   0.81 
AF173006-1|AAL32992.1|  322|Homo sapiens olfactory receptor-like...    33   0.81 
AB065767-1|BAC05987.1|  322|Homo sapiens seven transmembrane hel...    33   0.81 

>BC113557-1|AAI13558.1|  322|Homo sapiens olfactory receptor, family
           5, subfamily P, member 2 protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
 Frame = +3

Query: 357 GSS*TFCGILLKSCTPSPLKELLIFLIRAAGNASLCLFLVFILCKSQTLGNSTMFLRTYN 536
           G+     G +L   T  P+  +++F+I  +GN S+   ++ I   SQ L +   F  ++ 
Sbjct: 7   GNHTALTGFILLGLTDDPILRVILFMIILSGNLSI---IILIRISSQ-LHHPMYFFLSHL 62

Query: 537 KFSKMYWDAKVRILISLNLSLKDS----LGCIL*IARIALFCRMKIVSTSA 677
            F+ M + + V   + +N  ++ +    LGC + +   A F  ++ V  +A
Sbjct: 63  AFADMAYSSSVTPNMLVNFLVERNTVSYLGCAIQLGSAAFFATVECVLLAA 113


>BC101710-1|AAI01711.1|  322|Homo sapiens olfactory receptor, family
           5, subfamily P, member 2 protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
 Frame = +3

Query: 357 GSS*TFCGILLKSCTPSPLKELLIFLIRAAGNASLCLFLVFILCKSQTLGNSTMFLRTYN 536
           G+     G +L   T  P+  +++F+I  +GN S+   ++ I   SQ L +   F  ++ 
Sbjct: 7   GNHTALTGFILLGLTDDPILRVILFMIILSGNLSI---IILIRISSQ-LHHPMYFFLSHL 62

Query: 537 KFSKMYWDAKVRILISLNLSLKDS----LGCIL*IARIALFCRMKIVSTSA 677
            F+ M + + V   + +N  ++ +    LGC + +   A F  ++ V  +A
Sbjct: 63  AFADMAYSSSVTPNMLVNFLVERNTVSYLGCAIQLGSAAFFATVECVLLAA 113


>AF173006-1|AAL32992.1|  322|Homo sapiens olfactory receptor-like
           protein JCG3 protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
 Frame = +3

Query: 357 GSS*TFCGILLKSCTPSPLKELLIFLIRAAGNASLCLFLVFILCKSQTLGNSTMFLRTYN 536
           G+     G +L   T  P+  +++F+I  +GN S+   ++ I   SQ L +   F  ++ 
Sbjct: 7   GNHTALTGFILLGLTDDPILRVILFMIILSGNLSI---IILIRISSQ-LHHPMYFFLSHL 62

Query: 537 KFSKMYWDAKVRILISLNLSLKDS----LGCIL*IARIALFCRMKIVSTSA 677
            F+ M + + V   + +N  ++ +    LGC + +   A F  ++ V  +A
Sbjct: 63  AFADMAYSSSVTPNMLVNFLVERNTVSYLGCAIQLGSAAFFATVECVLLAA 113


>AB065767-1|BAC05987.1|  322|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
 Frame = +3

Query: 357 GSS*TFCGILLKSCTPSPLKELLIFLIRAAGNASLCLFLVFILCKSQTLGNSTMFLRTYN 536
           G+     G +L   T  P+  +++F+I  +GN S+   ++ I   SQ L +   F  ++ 
Sbjct: 7   GNHTALTGFILLGLTDDPILRVILFMIILSGNLSI---IILIRISSQ-LHHPMYFFLSHL 62

Query: 537 KFSKMYWDAKVRILISLNLSLKDS----LGCIL*IARIALFCRMKIVSTSA 677
            F+ M + + V   + +N  ++ +    LGC + +   A F  ++ V  +A
Sbjct: 63  AFADMAYSSSVTPNMLVNFLVERNTVSYLGCAIQLGSAAFFATVECVLLAA 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,209,559
Number of Sequences: 237096
Number of extensions: 1800934
Number of successful extensions: 3220
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3220
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)