Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14d22
         (361 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075397-1|AAL68229.1|  827|Drosophila melanogaster LD28101p pro...    30   1.0  
AE014296-83|AAN11439.1|  827|Drosophila melanogaster CG32344-PA ...    30   1.0  
BT009995-1|AAQ22464.1| 1164|Drosophila melanogaster RE37196p pro...    29   2.4  
AE013599-2768|AAF57637.2| 1541|Drosophila melanogaster CG15080-P...    29   2.4  
AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p pro...    27   9.5  
AY061067-1|AAL28615.1|  426|Drosophila melanogaster LD03548p pro...    27   9.5  
AL109630-9|CAB51668.1|  426|Drosophila melanogaster EG:BACR7A4.1...    27   9.5  
AE014298-132|AAF45571.1|  426|Drosophila melanogaster CG3026-PA ...    27   9.5  
AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA...    27   9.5  

>AY075397-1|AAL68229.1|  827|Drosophila melanogaster LD28101p
           protein.
          Length = 827

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -2

Query: 231 MPKEFKEQVIKTVTRIEESHNVVGVLYLSKDA 136
           +P++  E+   TVT I++SH++ GVL  S++A
Sbjct: 415 IPQDLLEEEHLTVTDIKKSHHIAGVLRTSENA 446


>AE014296-83|AAN11439.1|  827|Drosophila melanogaster CG32344-PA
           protein.
          Length = 827

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -2

Query: 231 MPKEFKEQVIKTVTRIEESHNVVGVLYLSKDA 136
           +P++  E+   TVT I++SH++ GVL  S++A
Sbjct: 415 IPQDLLEEEHLTVTDIKKSHHIAGVLRTSENA 446


>BT009995-1|AAQ22464.1| 1164|Drosophila melanogaster RE37196p
           protein.
          Length = 1164

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 66  NASRARQHSTGPPFAQAWSIL*YRRLLTDTELQQR 170
           +A R R H+T PPF    SI  Y   L  T   QR
Sbjct: 312 DAFRQRPHTTNPPFEYTQSIADYEAPLPTTTTTQR 346


>AE013599-2768|AAF57637.2| 1541|Drosophila melanogaster CG15080-PA
           protein.
          Length = 1541

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 66  NASRARQHSTGPPFAQAWSIL*YRRLLTDTELQQR 170
           +A R R H+T PPF    SI  Y   L  T   QR
Sbjct: 689 DAFRQRPHTTNPPFEYTQSIADYEAPLPTTTTTQR 723


>AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p
           protein.
          Length = 1266

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 3   LKRKFMVRQKLIFPVFNNNIYNASRARQHSTGPP 104
           L  +F + QK  FP+  N  ++  +A++    PP
Sbjct: 222 LNERFSMPQKSAFPIGRNPCFDGKKAKKSKCPPP 255


>AY061067-1|AAL28615.1|  426|Drosophila melanogaster LD03548p
           protein.
          Length = 426

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = -2

Query: 264 IQYKKKINKCKMPKEFKEQVIKTVTRIEESHNVV 163
           ++++K+ NKC  P++  ++ +  +  +EE   VV
Sbjct: 111 LEHQKRQNKCDRPRKLTKKDLAELAALEERERVV 144


>AL109630-9|CAB51668.1|  426|Drosophila melanogaster EG:BACR7A4.16
           protein.
          Length = 426

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = -2

Query: 264 IQYKKKINKCKMPKEFKEQVIKTVTRIEESHNVV 163
           ++++K+ NKC  P++  ++ +  +  +EE   VV
Sbjct: 111 LEHQKRQNKCDRPRKLTKKDLAELAALEERERVV 144


>AE014298-132|AAF45571.1|  426|Drosophila melanogaster CG3026-PA
           protein.
          Length = 426

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = -2

Query: 264 IQYKKKINKCKMPKEFKEQVIKTVTRIEESHNVV 163
           ++++K+ NKC  P++  ++ +  +  +EE   VV
Sbjct: 111 LEHQKRQNKCDRPRKLTKKDLAELAALEERERVV 144


>AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA
           protein.
          Length = 1263

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 3   LKRKFMVRQKLIFPVFNNNIYNASRARQHSTGPP 104
           L  +F + QK  FP+  N  ++  +A++    PP
Sbjct: 219 LNERFSMPQKSAFPIGRNPCFDGKKAKKSKCPPP 252


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,471,915
Number of Sequences: 53049
Number of extensions: 265055
Number of successful extensions: 529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)