Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14d16
(460 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical pr... 105 1e-23
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 36 0.014
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 32 0.17
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical pr... 30 0.70
AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kin... 30 0.70
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 30 0.93
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 0.93
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 1.2
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 1.2
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 29 1.6
AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical ... 29 2.1
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 2.1
Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical pr... 28 2.8
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 28 2.8
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 28 2.8
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 28 3.8
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 28 3.8
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 27 5.0
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 27 5.0
U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical p... 27 5.0
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 27 5.0
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 27 6.6
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 27 6.6
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 27 6.6
Z78544-4|CAB01762.3| 374|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical pr... 27 8.7
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 8.7
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 8.7
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 8.7
AL032647-7|CAA21691.2| 360|Caenorhabditis elegans Hypothetical ... 27 8.7
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 27 8.7
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 27 8.7
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 27 8.7
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 27 8.7
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 27 8.7
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 27 8.7
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 8.7
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 8.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 27 8.7
AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical ... 27 8.7
>U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical
protein C27F2.5 protein.
Length = 269
Score = 105 bits (253), Expect = 1e-23
Identities = 49/86 (56%), Positives = 60/86 (69%)
Frame = -1
Query: 319 RRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNA 140
RRR GV AIQK + K+ KG ++ Q Q S+QLE LE FA +H+ EIKKN+
Sbjct: 4 RRRIGVAAIQKKQETANKFAAKGDQMAGEQLVQFSQQLEQLSAGLEMFAQRHRDEIKKNS 63
Query: 139 QFRRQFQEMCAAIGVDPLASGKGFWS 62
QFRR FQEMCA++GVDPLAS KGFW+
Sbjct: 64 QFRRHFQEMCASVGVDPLASSKGFWA 89
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 35.9 bits (79), Expect = 0.014
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -1
Query: 331 QPKMRRRAGVGAIQKHRLEQE---KYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHK 161
Q + RAG I + + + +YKE+ T ENQ Q ++E + +L+ +KH+
Sbjct: 535 QSQQLDRAGNMLITEQEIRNQTSVQYKER-TSALENQLSQKDAEIENLKRDLQQLVTKHE 593
Query: 160 SEIKK 146
SE+K+
Sbjct: 594 SELKE 598
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/61 (22%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = -1
Query: 292 QKHRLEQEKYKEKGTEI--QENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQ 119
Q+H+ + E+Y+++ EI +E + +Q +++ E ++ +DF + + ++++ + ++Q Q
Sbjct: 203 QRHKQQLEEYEKRNQEILRREEEIKQQNQERE--KQINDDFEKRKQEKLQREEEMKQQNQ 260
Query: 118 E 116
E
Sbjct: 261 E 261
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical protein
F01G4.3 protein.
Length = 1266
Score = 31.1 bits (67), Expect = 0.40
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -1
Query: 253 GTEIQ---ENQFQQMSKQLEVFRENLEDFASKHKSEIKK-NAQFRRQFQEMCAAIGVDPL 86
G E+Q + F ++S+ ++ LE ASKHKS+I + R E+ V
Sbjct: 1141 GREMQFGGDTVFGEISESVKSVLTRLESVASKHKSQISDLGCEIRFDLMEV-----VYEW 1195
Query: 85 ASGKGFWSVLDYTSCR 38
A+G F+ +++ T C+
Sbjct: 1196 ANGTPFYQIMEMTDCQ 1211
>Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical
protein T04C10.1 protein.
Length = 882
Score = 30.3 bits (65), Expect = 0.70
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -1
Query: 331 QPKMRRRAGVGAIQKHRLE-QEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSE 155
QP+ +++ Q+ +LE Q+K + ++Q+ Q QQ +Q + R+++ S +
Sbjct: 750 QPQQQQQQQYQQTQRTQLEQQQKQAQLQQQLQQQQMQQQQQQQQQ-RQHMPQAQSSSQQH 808
Query: 154 IKKNAQFRRQFQ 119
++ A+ R+Q Q
Sbjct: 809 LQSRARPRQQDQ 820
>AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kinase
protein.
Length = 882
Score = 30.3 bits (65), Expect = 0.70
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -1
Query: 331 QPKMRRRAGVGAIQKHRLE-QEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSE 155
QP+ +++ Q+ +LE Q+K + ++Q+ Q QQ +Q + R+++ S +
Sbjct: 750 QPQQQQQQQYQQTQRTQLEQQQKQAQLQQQLQQQQMQQQQQQQQQ-RQHMPQAQSSSQQH 808
Query: 154 IKKNAQFRRQFQ 119
++ A+ R+Q Q
Sbjct: 809 LQSRARPRQQDQ 820
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 29.9 bits (64), Expect = 0.93
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 139 EHSSLFHSCVLMQNLPNFP*TLPVVSTSAGIGFLVFLCPFLYISLVPICVFGLHL 303
EH+ S ++ + LPN + S +G +CPF + +++P+ +F + L
Sbjct: 136 EHACSVPSLMMGETLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVAL 190
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 0.93
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -1
Query: 334 IQPKMRRRAGVGAIQ--KHRLEQEKYKEKGTEIQ----ENQFQQMSKQLEVFRENLEDFA 173
++ + +RR + I+ ++ LE EK + G ENQ ++ +QLEV E++
Sbjct: 1582 VEAEEKRRGLLKQIRDLENELENEKRGKSGAVSHRKKIENQIGELEQQLEVANRLKEEY- 1640
Query: 172 SKHKSEIKKNAQFRRQFQEMC 110
++KKN Q +++Q C
Sbjct: 1641 ---NKQLKKNQQIIKEYQIEC 1658
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 143 ILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQS 283
ILL F L F F K+ + ++L +V L CALF I + F S
Sbjct: 138 ILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVS 184
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 143 ILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQS 283
ILL F L F F K+ + ++L +V L CALF I + F S
Sbjct: 138 ILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVS 184
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 194 PKHFQLFRHLLELVFL--YFCALFFIFLLFQSVFLDCTY 304
P F++F H + V L YF ALF +F + VF+ Y
Sbjct: 8 PLIFRIFTHSIHFVSLPTYFLALFSLFFIKSKVFVTYRY 46
Score = 27.9 bits (59), Expect = 3.8
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = +3
Query: 147 FFISLLCFDA-------KSSKFSLNTSSCFDICWNWFSCISVPFSLYFSCSNLCFWIA 299
FF+ L DA K++ N S+ F C N S + VPFS Y S S + WIA
Sbjct: 148 FFVILTSHDAHRFQEEHKATFLKQNPSAHFLTCEN--SYLFVPFSDYVSTSIMILWIA 203
>AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical
protein Y105C5B.8 protein.
Length = 447
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 149 LYFTLVF*CKIFQIFPKHFQLFRHLLELV--FLYFCALFFIFLLFQSVFLD 295
++F L + + F FQ +R V YFCA F IF SV+ D
Sbjct: 113 IFFQLFYIAVVLNTFMAKFQFWRSNENFVRGVAYFCAFFSIFEPLPSVYKD 163
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/57 (17%), Positives = 37/57 (64%)
Frame = -1
Query: 298 AIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRR 128
+I+ +++++ K++ T++++ + Q+M K + +NL++ + HK+ + +++ ++
Sbjct: 839 SIRNSQIQEDLVKQENTKLRD-ELQEMQKMSKKRSQNLDELENMHKTLLVDHSRLQQ 894
>Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical
protein F21C3.6 protein.
Length = 186
Score = 28.3 bits (60), Expect = 2.8
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = -1
Query: 277 EQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQEMCAAIG 98
E+ K+++K EI+ +++++QLE R E +K K+E +K +FR++ QE+ +
Sbjct: 38 ERTKWRKKRREIE---LKKVAEQLEQHRIREEAELAKRKTENQKK-EFRKR-QEIFEKVF 92
Query: 97 VDPLASGKGFWSVL-DYTSCR 38
D + K +V+ DY R
Sbjct: 93 QDAESGQKAVENVMSDYRESR 113
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = -1
Query: 346 HFNTIQPKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLE 182
H ++ K+R+ + + RL+Q + + K +++ + +KQLE RE +
Sbjct: 121 HVAELEQKLRKEMSLTRKYEQRLQQLESQLKNNSASDSKMELANKQLEAEREQFK 175
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 276 NKRNIKKRAQKYKKTNSSRCRNNWKCLGK 190
NK+N KK Q YK+T + C+ KCL K
Sbjct: 629 NKKNAKKMEQ-YKRTLQTGCQRYDKCLRK 656
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -1
Query: 292 QKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNA---QFRRQF 122
+K ++E EK KEK + +EN ++ K+ E E A + + +K + RRQ
Sbjct: 382 KKTKMEMEKEKEKTRKKEENNKRKEKKEAEKLLERSYKRAEQARVRYEKTGIRLEKRRQL 441
Query: 121 QE 116
+E
Sbjct: 442 EE 443
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 295 IQKHRLEQEKYKEKGTEIQ-ENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQ 119
+Q+ +Q K K E+Q + ++M KQL+ ED K + NA ++ +
Sbjct: 151 LQRKSCDQNKEKFTALELQLQETNERMQKQLDELNAKFEDVNRKLQKASDCNADTEKENE 210
Query: 118 EMCAAIGVD 92
E + G D
Sbjct: 211 EGVSDNGTD 219
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 PSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFI-FLLFQS 283
P ++S +L + F I +++ Q F H+ +L +F + FI FLL+ S
Sbjct: 441 PRKISHILTILIGFAICILELYGPSNQRFPHIYQLANAFFSCVHFIYFLLYLS 493
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = -1
Query: 295 IQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQ 125
I K + EQ+ K+K E ++ ++ + ++ + E+ +K K E + A+ R+
Sbjct: 290 IIKFKKEQQAKKDKAKEDKQRAIREKQEAIDREKREKEEAEAKQKEEADRKAKEERE 346
>U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical
protein K06C4.8 protein.
Length = 355
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 203 FQLFRHLLELVFLYFCA-LFFIFLLFQSVFLDCTYTC 310
F++ H+ ++ +++ A FFI+L+F + + TC
Sbjct: 281 FKIIHHISNVLLVFYSASTFFIYLIFSEKYRNVLSTC 317
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/87 (22%), Positives = 36/87 (41%)
Frame = +2
Query: 107 STHFLKLPSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQSV 286
S HF+ +P + LY + +F + L H+ E +F + FF+ +
Sbjct: 17 SIHFISIPI-YCLALYSLIFIKSNVFTTY--RIFLIWHVSENIFFEMYSAFFLAPALHAP 73
Query: 287 FLDCTYTCAASHFWLYCIKVYYYVANS 367
F+ T SHF + + +Y + S
Sbjct: 74 FVVMRTTGILSHFGINSLVQFYILTFS 100
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -1
Query: 334 IQPKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSE 155
I P+ R + A+ E +K K E Q +K EV+ + LE+ KH+ E
Sbjct: 137 IPPEGVLRLTINALDSAARESKK-KTMAIESLTKQVDDANKLTEVYMKRLEELEDKHRFE 195
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
Frame = +2
Query: 218 HLLELVFLY--FCALFFIF------LLFQSVFLDCTYTCAASHF 325
HL++L L F LF+ F +LF FL+C +TC + +F
Sbjct: 216 HLVQLTRLNSAFLCLFYKFSNIPNCVLFLHFFLNCNFTCKSKYF 259
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = -1
Query: 328 PKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIK 149
PK+ + +QKHR Q+++ + ++E +FQ+ E +E+ + + E+
Sbjct: 373 PKIIEKLAQRRLQKHREHQDEFSRRELTLRE-EFQKKLDVTEGDMRKVEEGLAAREREVH 431
Query: 148 KN 143
+N
Sbjct: 432 EN 433
>Z78544-4|CAB01762.3| 374|Caenorhabditis elegans Hypothetical
protein K04G11.5 protein.
Length = 374
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 226 GIGFLVFLCPFLYISLVPICVFGLHLH--LRGVAFLVVL 336
G+ ++ LCP Y++L CV G+ L L G+ +L
Sbjct: 139 GLRYMTDLCPPAYLTLCVQCVVGVFLQTILAGIVIAKIL 177
>Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical
protein ZC443.5 protein.
Length = 533
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 221 LLELVFLYFCALFFIFLLFQSVFL 292
LL LVF+YF L FIF L +FL
Sbjct: 504 LLVLVFIYF-TLLFIFKLVARIFL 526
>Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical
protein C05D12.1 protein.
Length = 498
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 203 FQLFRHLLEL-VFLYFCALFFIFLLFQSVFLDCTYTCAASHF 325
FQL R ++ L V + + FIF V+ C+Y C + F
Sbjct: 283 FQLHRDMMILSVVIQVICVLFIFYQAGWVWYQCSYMCTSDDF 324
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
protein C27A2.1 protein.
Length = 1076
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 253 GTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQEMCAAI 101
G I+ + ++ + E R+NLED K +S+I +Q +R E+ A +
Sbjct: 259 GAMIEYREVEKSIAECEKHRKNLEDRIKKDRSQI---SQMQRSCNEILAKV 306
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 230 LVFLYFCAL-FFIFLLFQSVFL 292
L FLYFC L FF+ L ++VF+
Sbjct: 313 LAFLYFCTLIFFLAWLVKNVFI 334
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 230 LVFLYFCAL-FFIFLLFQSVFL 292
L FLYFC L FF+ L ++VF+
Sbjct: 313 LAFLYFCTLIFFLAWLVKNVFI 334
>AL032647-7|CAA21691.2| 360|Caenorhabditis elegans Hypothetical
protein Y57A10B.4 protein.
Length = 360
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 137 LSILLYFTL---VF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQS 283
L I++Y +L + C +F++ + +F HLL+ V L + I LLF S
Sbjct: 260 LVIVIYLSLSLTMLICLVFELIQGYDWIFVHLLDNVILSAALVISIALLFCS 311
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = -1
Query: 340 NTIQPKMRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHK 161
+T++PKMR + A+ +Y E ++ + + L E FASK
Sbjct: 487 HTVKPKMRSNVILQAMLPVVNTHAEYHANQFEAYAHRIEALRNCLAAIFEGKVAFASKSL 546
Query: 160 SEIKKNAQFRRQFQEMC 110
+K + +F E+C
Sbjct: 547 DAVKSSMRFAPLRIELC 563
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 316 RRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKK 146
R +G I R QEK KEK + +E ++ +Q E ++ E+ A K K + +K
Sbjct: 187 RASGGPVILSSRRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEK 243
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 316 RRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKK 146
R +G I R QEK KEK + +E ++ +Q E ++ E+ A K K + +K
Sbjct: 223 RASGGPVILSSRRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEK 279
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 316 RRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKK 146
R +G I R QEK KEK + +E ++ +Q E ++ E+ A K K + +K
Sbjct: 223 RASGGPVILSSRRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEK 279
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 230 LVFLYFCAL-FFIFLLFQSVFL 292
L FLYFC L FF+ L ++VF+
Sbjct: 371 LAFLYFCTLIFFLAWLVKNVFI 392
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 230 LVFLYFCAL-FFIFLLFQSVFL 292
L FLYFC L FF+ L ++VF+
Sbjct: 371 LAFLYFCTLIFFLAWLVKNVFI 392
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 230 LVFLYFCAL-FFIFLLFQSVFL 292
L FLYFC L FF+ L ++VF+
Sbjct: 371 LAFLYFCTLIFFLAWLVKNVFI 392
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 230 LVFLYFCAL-FFIFLLFQSVFL 292
L FLYFC L FF+ L ++VF+
Sbjct: 343 LAFLYFCTLIFFLAWLVKNVFI 364
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -1
Query: 292 QKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASK-HKSEIKKNAQFRRQFQE 116
+K E+E+ + K + + +Q K+LE E+ ASK K E + A+ +R+ +E
Sbjct: 125 KKKEKEEEERRAKEERKKAKKEKQRQKELEERNRKAEEAASKRRKREAEVEAERKRKRKE 184
Query: 115 M 113
+
Sbjct: 185 I 185
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 255 FSLYFSCSNLCFWIAPTPARRR 320
F +YF C CF + P+P R+
Sbjct: 390 FCIYFICVTSCFLLRPSPFERQ 411
>AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.2 protein.
Length = 778
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 224 LELVFLYFCALFFIFLLFQSVFLDCTYTCAASHFWL 331
L L+++ F +FF+FL + T C H WL
Sbjct: 568 LSLIYILFRLMFFVFLCAMFMITTVTDIC-CDHRWL 602
>AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.6 protein.
Length = 778
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 224 LELVFLYFCALFFIFLLFQSVFLDCTYTCAASHFWL 331
L L+++ F +FF+FL + T C H WL
Sbjct: 568 LSLIYILFRLMFFVFLCAMFMITTVTDIC-CDHRWL 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,181,412
Number of Sequences: 27780
Number of extensions: 255280
Number of successful extensions: 1179
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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